Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p007560 Quercus lobata HOM05D008610 ORTHO05D010832 6.3e-112 407.5 216 100.0
Thecc.04G278400 Theobroma cacao HOM05D008610 ORTHO05D010832 4.4e-49 198.7 212 54.7
Duzib151G0343 Durio zibethinus HOM05D008610 ORTHO05D010832 2.7e-46 189.5 218 54.1
CANSAT78G1094 Cannabis sativa HOM05D008610 ORTHO05D010832 7.6e-41 171.4 232 46.1
TAR362G0442 Trochodendron aralioides HOM05D008610 ORTHO05D010832 3.6e-35 152.5 216 44.4
COL.COLO4_13922 Corchorus olitorius HOM05D008610 ORTHO05D010832 4.8e-35 152.1 204 48.0
TWI09G0412 Tripterygium wilfordii HOM05D008610 ORTHO05D010832 3.4e-33 146.0 219 45.7
Phvul.003G101300 Phaseolus vulgaris HOM05D008610 ORTHO05D010832 6.4e-32 141.7 219 43.4
VMungo1215G1271 Vigna mungo HOM05D008610 ORTHO05D010832 5.4e-31 138.7 199 46.7
Lj4g0020809 Lotus japonicus HOM05D008610 ORTHO05D010832 7.1e-31 138.3 197 49.2
Ca_21546_v3 Cicer arietinum L. HOM05D008610 ORTHO05D010832 2.7e-30 136.3 172 51.2
CSS0018848 Camellia sinensis var. sinensis HOM05D008610 ORTHO05D010832 2.3e-29 133.3 204 47.1
Glyma.07G251100 Glycine max HOM05D008610 ORTHO05D010832 6.7e-29 131.7 203 46.3
Glyma.17G023200 Glycine max HOM05D008610 ORTHO05D010832 8.7e-29 131.3 201 47.3
Solyc01g067340.3 Solanum lycopersicum HOM05D008610 ORTHO05D010832 4.3e-28 129.0 220 41.4
CAN.G556.6 Capsicum annuum HOM05D008610 ORTHO05D010832 1.3e-27 127.5 218 39.0
TPR.G28783 Trifolium pratense HOM05D008610 ORTHO05D010832 1.3e-27 127.5 171 46.8
Peaxi162Scf00386g00922 Petunia axillaris HOM05D008610 ORTHO05D010832 1.6e-27 127.1 219 39.7
Hma1.2p1_0823F.1_g224690 Hydrangea macrophylla HOM05D008610 ORTHO05D010832 8.1e-27 124.8 202 46.5
Nn4g26013 Nelumbo nucifera HOM05D008610 ORTHO05D010832 1.4e-26 124.0 215 40.5
Nitab4.5_0000829g0060 Nicotiana tabacum HOM05D008610 ORTHO05D010832 1.8e-26 123.6 218 40.4
Actinidia23424 Actinidia chinensis HOM05D008610 ORTHO05D010832 3.1e-26 122.9 211 45.5
Psat4g226320 Pisum sativum HOM05D008610 ORTHO05D010832 9.0e-26 121.3 167 49.1
Sed0011065 Sechium edule HOM05D008610 ORTHO05D010832 2.0e-25 120.2 200 40.0
ClCG05G005840 Citrullus lanatus HOM05D008610 ORTHO05D010832 2.6e-25 119.8 205 41.0
Dinv44421 Davidia involucrata HOM05D008610 ORTHO05D010832 1.3e-24 117.5 146 50.7
Medtr4g118830 Medicago truncatula HOM05D008610 ORTHO05D010832 1.3e-24 117.5 174 47.7
CsaV3_3G014190 Cucumis sativus L. HOM05D008610 ORTHO05D010832 1.7e-24 117.1 201 40.3
Rhsim02G0012900 Rhododendron simsii HOM05D008610 ORTHO05D010832 2.4e-23 113.2 203 43.3
Nitab4.5_0002986g0040 Nicotiana tabacum HOM05D008610 ORTHO05D010832 3.2e-23 112.8 202 41.1
arahy.Tifrunner.gnm1.ann1.L0EE17 Arachis hypogaea HOM05D008610 ORTHO05D010832 1.6e-22 110.5 163 42.9
Migut.G00203 Erythranthe guttata HOM05D008610 ORTHO05D010832 2.7e-22 109.8 219 39.7
Lalb_Chr12g0196451 Lupinus albus HOM05D008610 ORTHO05D010832 6.0e-22 108.6 141 48.9
Sopen01g029220 Solanum pennellii HOM05D008610 ORTHO05D010832 5.1e-21 105.5 188 41.0
MELO3C006612.2 Cucumis melo HOM05D008610 ORTHO05D010832 2.5e-20 103.2 190 40.0
arahy.Tifrunner.gnm1.ann1.2NND9M Arachis hypogaea HOM05D008610 ORTHO05D010832 4.3e-20 102.4 165 40.6
ATR0706G219 Amborella trichopoda HOM05D008610 ORTHO05D010832 9.6e-20 101.3 217 34.1
unitig_748.g8579 Utricularia gibba HOM05D008610 ORTHO05D010832 4.2e-15 85.9 177 37.3
Aqoxy2G03100 Aquilegia oxysepala HOM05D008610 ORTHO05D010832 2.1e-14 83.6 279 29.7
Atru.chr4.2765 Acer truncatum HOM05D008610 ORTHO05D010832 3.0e-13 79.7 97 47.4
SGA_v2.0_scaffold57G20206 Striga asiatica HOM05D008610 ORTHO05D010832 3.0e-13 79.7 204 35.3
DCAR_027105 Daucus carota HOM05D008610 ORTHO05D010832 8.7e-13 78.2 156 39.1
PSO170G6844 Papaver somniferum HOM05D008610 ORTHO05D010832 5.3e-10 68.9 248 28.2
Nn3g21308 Nelumbo nucifera HOM05D008610 ORTHO05D010832 2.0e-09 67.0 130 38.5
Dinv21746 Davidia involucrata HOM05D008610 ORTHO05D010832 7.2e-07 58.5 64 53.1


User provided reference genes

Program Settings