Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p007489 Quercus lobata HOM05D006775 ORTHO05D008344 9.8e-149 530.0 253 100.0
Cfa015346 Carpinus fangiana HOM05D006775 ORTHO05D008344 6.4e-108 394.4 257 77.8
CiPaw.02G086400 Carya illinoinensis HOM05D006775 ORTHO05D008344 8.7e-97 357.5 245 71.8
GSVIVG01017799001 Vitis vinifera HOM05D000611 ORTHO05D000809 5.0e-92 341.7 251 67.3
Actinidia40225 Actinidia chinensis HOM05D006775 ORTHO05D008344 7.2e-91 337.8 253 65.2
Atru.chr4.2756 Acer truncatum HOM05D006775 ORTHO05D008344 9.3e-91 337.4 248 65.3
Cpa.g.sc1008.3 Carica papaya HOM05D006775 ORTHO05D008344 2.5e-88 329.3 247 66.0
Manes.15G016600 Manihot esculenta HOM05D006775 ORTHO05D008344 3.7e-87 325.5 247 66.0
Ciclev10006777m.g Citrus clementina HOM05D000611 ORTHO05D000809 9.1e-86 320.9 242 66.1
Hma1.2p1_0823F.1_g224630 Hydrangea macrophylla HOM05D006775 ORTHO05D008344 9.1e-86 320.9 246 64.2
Potri.008G204800 Populus trichocarpa HOM05D006775 ORTHO05D008344 1.3e-84 317.0 253 63.6
Sc25g0004760 Simmondsia chinensis HOM05D006775 ORTHO05D008344 5.0e-84 315.1 248 61.3
TWI09G0159 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 7.2e-83 311.2 248 62.9
Glyma.07G251400 Glycine max HOM05D006775 ORTHO05D008344 9.4e-83 310.8 244 59.8
SGA_v2.0_scaffold57G20240 Striga asiatica HOM05D006775 ORTHO05D008344 3.6e-82 308.9 244 61.9
COL.COLO4_13925 Corchorus olitorius HOM05D006775 ORTHO05D008344 4.6e-82 308.5 251 62.2
TWI09G0706 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 4.6e-82 308.5 248 62.5
Thecc.04G277900 Theobroma cacao HOM05D006775 ORTHO05D008344 1.0e-81 307.4 250 62.0
Duzib151G0911 Durio zibethinus HOM05D006775 ORTHO05D008344 1.4e-81 307.0 238 64.7
Eucgr.H03770 Eucalyptus grandis HOM05D006775 ORTHO05D008344 3.9e-81 305.4 242 63.2
DCAR_002444 Daucus carota HOM05D006775 ORTHO05D008344 6.7e-81 304.7 259 58.3
Phvul.003G101000 Phaseolus vulgaris HOM05D006775 ORTHO05D008344 8.8e-81 304.3 237 61.2
Nn3g21322 Nelumbo nucifera HOM05D006775 ORTHO05D008344 1.5e-80 303.5 261 58.2
Lj3A812T71 Lonicera japonica HOM05D006775 ORTHO05D008344 2.6e-80 302.8 254 57.5
MD00G1092600 Malus domestica HOM05D006775 ORTHO05D008344 7.4e-80 301.2 244 59.8
Aqoxy5G01958 Aquilegia oxysepala HOM05D006775 ORTHO05D008344 2.2e-79 299.7 258 57.4
SalBow2G3406 Salvia bowleyana HOM05D006775 ORTHO05D008344 8.2e-79 297.7 247 61.1
VMungo1215G1959 Vigna mungo HOM05D006775 ORTHO05D008344 1.1e-78 297.4 237 60.3
Sabra08G0157200 Salix brachista HOM05D006775 ORTHO05D008344 1.4e-78 297.0 251 60.2
TAR633G2345 Trochodendron aralioides HOM05D001386 ORTHO05D003791 5.3e-78 295.0 237 64.1
Nitab4.5_0005595g0020 Nicotiana tabacum HOM05D006775 ORTHO05D008344 1.2e-77 293.9 247 58.3
PGR004G1240 Punica granatum HOM05D006775 ORTHO05D008344 1.2e-77 293.9 267 57.7
MSTRG.10056 Avicennia marina HOM05D006775 ORTHO05D008344 2.6e-77 292.7 256 59.8
arahy.Tifrunner.gnm1.ann1.HV9WHL Arachis hypogaea HOM05D006775 ORTHO05D008344 1.3e-76 290.4 246 57.3
Migut.G00207 Erythranthe guttata HOM05D006775 ORTHO05D008344 1.3e-76 290.4 252 57.5
vmacro08201 Vaccinium macrocarpon HOM05D006775 ORTHO05D008344 2.9e-76 289.3 233 61.4
arahy.Tifrunner.gnm1.ann1.UNR197 Arachis hypogaea HOM05D006775 ORTHO05D008344 6.5e-76 288.1 252 56.0
MBI18_g12413_MAGBIO Magnolia biondii HOM05D006775 ORTHO05D008344 6.5e-76 288.1 250 57.2
Cc03_g02340 Coffea canephora HOM05D006775 ORTHO05D008344 8.5e-76 287.7 244 57.4
ECA240G4404 Erigeron canadensis HOM05D006775 ORTHO05D008344 9.4e-75 284.3 247 56.7
Lsat_1_v5_gn_5_50761 Lactuca sativa HOM05D006775 ORTHO05D008344 1.2e-74 283.9 252 54.8
Glyma.17G022900 Glycine max HOM05D006775 ORTHO05D008344 2.1e-74 283.1 249 55.0
Nitab4.5_0003256g0010 Nicotiana tabacum HOM05D006775 ORTHO05D008344 2.7e-74 282.7 247 57.9
Gohir.D10G166800 Gossypium hirsutum HOM05D006775 ORTHO05D008344 6.1e-74 281.6 246 56.5
MELO3C006607.2 Cucumis melo HOM05D006775 ORTHO05D008344 7.9e-74 281.2 239 58.2
ClCG05G005800 Citrullus lanatus HOM05D006775 ORTHO05D008344 3.0e-73 279.3 239 57.3
Sed0012602 Sechium edule HOM05D006775 ORTHO05D008344 3.0e-73 279.3 242 58.3
HanXRQChr03g0079491 Helianthus annuus HOM05D006775 ORTHO05D008344 3.9e-73 278.9 253 54.2
PGSC0003DMG400022660 Solanum tuberosum HOM05D006775 ORTHO05D008344 3.9e-73 278.9 246 57.7
Lalb_Chr13g0303871 Lupinus albus HOM05D006775 ORTHO05D008344 5.2e-73 278.5 241 56.0
Solyc01g067280.3 Solanum lycopersicum HOM05D006775 ORTHO05D008344 5.2e-73 278.5 246 57.3
CsaV3_3G014150 Cucumis sativus L. HOM05D006775 ORTHO05D008344 2.0e-72 276.6 236 58.1
Gorai.011G186100 Gossypium raimondii HOM05D006775 ORTHO05D008344 5.7e-72 275.0 246 56.1
Nn4g25991 Nelumbo nucifera HOM05D006775 ORTHO05D008344 7.4e-72 274.6 240 57.9
Sopen01g029070 Solanum pennellii HOM05D006775 ORTHO05D008344 7.4e-72 274.6 246 56.9
Medtr4g118790 Medicago truncatula HOM05D006775 ORTHO05D008344 9.7e-72 274.2 241 56.0
Lj4g0016853 Lotus japonicus HOM05D006775 ORTHO05D008344 2.8e-71 272.7 246 54.9
AUR62042989 Chenopodium quinoa HOM05D006775 ORTHO05D008344 3.7e-71 272.3 235 57.4
Peaxi162Scf00386g00010 Petunia axillaris HOM05D006775 ORTHO05D008344 3.7e-71 272.3 255 54.1
PSO832G0266 Papaver somniferum HOM05D006775 ORTHO05D008344 5.3e-70 268.5 253 53.8
TPR.G14956 Trifolium pratense HOM05D006775 ORTHO05D008344 5.3e-70 268.5 242 54.5
Haze_01265 Corylus avellana HOM05D006775 ORTHO05D008344 5.9e-69 265.0 183 72.1
RcHm_v2.0_Chr6g0302841 Rosa chinensis HOM05D006775 ORTHO05D008344 1.5e-67 260.4 249 53.0
Psat4g030400 Pisum sativum HOM05D006775 ORTHO05D008344 1.9e-67 260.0 242 53.7
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 1.2e-66 257.3 228 57.0
EL10Ac3g06567 Beta vulgaris HOM05D006775 ORTHO05D008344 1.6e-66 256.9 239 56.9
Psat4g030480 Pisum sativum HOM05D006775 ORTHO05D008344 2.6e-64 249.6 241 51.0
TWI09G0165 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 1.4e-62 243.8 196 63.3
Gohir.A09G233400 Gossypium hirsutum HOM05D006775 ORTHO05D008344 1.6e-61 240.4 239 52.3
CANSAT78G0382 Cannabis sativa HOM05D006775 ORTHO05D008344 2.7e-61 239.6 255 52.5
HPP92_025211 Vanilla planifolia HOM05D006775 ORTHO05D008344 1.1e-59 234.2 253 45.5
HPP92_025229 Vanilla planifolia HOM05D006775 ORTHO05D008344 1.9e-59 233.4 253 45.5
unitig_32.g10786 Utricularia gibba HOM05D006775 ORTHO05D008344 4.2e-59 232.3 224 52.2
Gohir.D09G234500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 1.6e-58 230.3 239 50.6
Prupe.1G365500 Prunus persica HOM05D006775 ORTHO05D008344 1.0e-57 227.6 175 61.7
Gorai.006G257400 Gossypium raimondii HOM05D006775 ORTHO05D008344 2.3e-57 226.5 239 51.0
A01p21970 Brassica napus HOM05D006775 ORTHO05D008344 3.0e-57 226.1 246 49.6
BraA01t02103Z Brassica rapa HOM05D006775 ORTHO05D008344 3.0e-57 226.1 246 49.6
Carub.0007s2625 Capsella rubella HOM05D006775 ORTHO05D008344 5.2e-57 225.3 249 49.0
BcaNung00261 Brassica carinata HOM05D006775 ORTHO05D008344 1.5e-56 223.8 247 48.2
ATR0706G197 Amborella trichopoda HOM05D006775 ORTHO05D008344 2.0e-56 223.4 244 48.8
Duzib052G0853 Durio zibethinus HOM05D006775 ORTHO05D008344 3.4e-56 222.6 236 53.8
THA.LOC104820238 Tarenaya hassleriana HOM05D006775 ORTHO05D008344 3.4e-56 222.6 244 48.0
Sp7g13860 Schrenkiella parvula HOM05D006775 ORTHO05D008344 4.4e-56 222.2 238 49.6
Ca_21549_v3 Cicer arietinum L. HOM05D006775 ORTHO05D008344 7.5e-56 221.5 228 49.6
BcaC09g50254 Brassica carinata HOM05D001154 ORTHO05D001175 1.3e-55 220.7 251 48.6
C01p27330 Brassica napus HOM05D006775 ORTHO05D008344 2.2e-55 219.9 246 48.8
BolC1t02676H Brassica oleracea HOM05D006775 ORTHO05D008344 2.2e-55 219.9 246 48.8
Rhsim04G0216500 Rhododendron simsii HOM05D006775 ORTHO05D008344 2.2e-55 219.9 295 44.4
CARHR289990 Cardamine hirsuta HOM05D006775 ORTHO05D008344 2.8e-55 219.5 248 48.4
Aa31LG9G1860 Aethionema arabicum HOM05D006775 ORTHO05D008344 6.3e-55 218.4 254 46.5
Gohir.A10G101330 Gossypium hirsutum HOM05D006775 ORTHO05D008344 4.5e-53 212.2 169 60.9
Oeu062887.1 Olea europaea HOM05D006775 ORTHO05D008344 5.5e-51 205.3 162 64.2
Os05g0372800 Oryza sativa ssp. japonica HOM05D006775 ORTHO05D008344 1.5e-48 197.2 229 44.5
Zm00001eb285420 Zea mays HOM05D006775 ORTHO05D008344 2.0e-48 196.8 231 46.3
FvH4_2g38460 Fragaria vesca HOM05D006775 ORTHO05D008344 4.4e-48 195.7 307 37.8
FAN20G0357 Fragaria x ananassa HOM05D006775 ORTHO05D008344 1.3e-47 194.1 296 38.9
Dinv38323 Davidia involucrata HOM05D006775 ORTHO05D008344 4.9e-47 192.2 167 58.1
Gohir.D10G153500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 2.3e-44 183.3 236 45.3
CDE08G1672 Ceratophyllum demersum HOM05D006775 ORTHO05D008344 5.2e-41 172.2 253 41.1
HPP92_025275 Vanilla planifolia HOM05D006775 ORTHO05D008344 5.2e-41 172.2 162 50.0
Pp3c2_550 Physcomitrium patens HOM05D006775 ORTHO05D008344 2.4e-38 163.3 254 35.8
AL7G39920 Arabidopsis lyrata HOM05D006775 ORTHO05D008344 3.5e-37 159.5 167 52.1
AT4G15563 Arabidopsis thaliana HOM05D006775 ORTHO05D008344 1.5e-35 154.1 167 49.7
AagrBONN_evm.TU.Sc2ySwM_362.2565 Anthoceros agrestis HOM05D006775 ORTHO05D008344 4.3e-35 152.5 240 34.2
Thhalv10026419m.g Eutrema salsugineum HOM05D006775 ORTHO05D008344 1.8e-33 147.1 167 47.3
CSS0032456 Camellia sinensis var. sinensis HOM05D006775 ORTHO05D008344 1.2e-32 144.4 104 67.3
Eucgr.A01819 Eucalyptus grandis HOM05D006775 ORTHO05D008344 1.9e-30 137.1 87 74.7
SMO340G0127 Selaginella moellendorffii HOM05D006775 ORTHO05D008344 1.5e-27 127.5 145 44.1
Aqoxy5G00644 Aquilegia oxysepala HOM05D006775 ORTHO05D008344 4.9e-23 112.5 90 56.7
CSS0028683 Camellia sinensis var. sinensis HOM05D006775 ORTHO05D008344 1.1e-22 111.3 83 60.2
Gorai.011G171400 Gossypium raimondii HOM05D006775 ORTHO05D008344 9.2e-22 108.2 110 54.5
Duzib212G0132 Durio zibethinus HOM05D006775 ORTHO05D008344 1.2e-21 107.8 110 48.2
Zm00001eb351020 Zea mays HOM05D006775 ORTHO05D008344 1.2e-21 107.8 142 43.7
Haze_01266 Corylus avellana HOM05D006775 ORTHO05D008344 2.7e-21 106.7 78 70.5
Actinidia23427 Actinidia chinensis HOM05D006775 ORTHO05D008344 3.5e-21 106.3 72 66.7
Oeu052260.1 Olea europaea HOM05D006775 ORTHO05D008344 4.6e-21 105.9 152 46.1
CBR_g21749 Chara braunii HOM05D006775 ORTHO05D008344 7.3e-19 98.6 156 36.5
Rhsim12G0090200 Rhododendron simsii HOM05D006775 ORTHO05D008344 9.5e-19 98.2 66 69.7
MD09G1114900 Malus domestica HOM05D006775 ORTHO05D008344 1.6e-18 97.4 79 54.4
PSO210G2970 Papaver somniferum HOM05D006775 ORTHO05D008344 2.0e-16 90.5 114 40.4


User provided reference genes

Program Settings