Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p006942 Quercus lobata HOM05D006941 ORTHO05D008361 1.5e-33 145.6 71 100.0
Manes.03G190000 Manihot esculenta HOM05D006941 ORTHO05D008361 1.6e-27 125.6 71 83.1
Gorai.005G056700 Gossypium raimondii HOM05D006941 ORTHO05D008361 6.0e-27 123.6 71 80.3
CiPaw.02G087700 Carya illinoinensis HOM05D006941 ORTHO05D008361 7.8e-27 123.2 71 80.3
Manes.14G117300 Manihot esculenta HOM05D006941 ORTHO05D008361 7.8e-27 123.2 71 83.1
Eucgr.H03704 Eucalyptus grandis HOM05D006941 ORTHO05D008361 1.7e-26 122.1 71 78.9
Gohir.A02G045400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 1.7e-26 122.1 71 78.9
Gohir.D02G051400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 1.7e-26 122.1 71 78.9
PGR004G2827 Punica granatum HOM05D006941 ORTHO05D008361 1.7e-26 122.1 71 78.9
Thecc.04G275300 Theobroma cacao HOM05D006941 ORTHO05D008361 1.7e-26 122.1 71 80.3
Eucgr.H03682 Eucalyptus grandis HOM05D006941 ORTHO05D008361 8.6e-26 119.8 71 77.5
Potri.005G071700 Populus trichocarpa HOM05D006941 ORTHO05D008361 8.6e-26 119.8 71 78.9
Phvul.010G109000 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 1.1e-25 119.4 71 77.5
Phvul.L002281 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 1.1e-25 119.4 71 77.5
Glyma.13G132200 Glycine max HOM05D006941 ORTHO05D008361 1.5e-25 119.0 71 78.9
Lj5g0014316 Lotus japonicus HOM05D006941 ORTHO05D008361 1.5e-25 119.0 71 78.9
Prupe.1G143700 Prunus persica HOM05D006941 ORTHO05D008361 1.5e-25 119.0 71 78.9
Glyma.10G044600 Glycine max HOM05D006941 ORTHO05D008361 2.5e-25 118.2 71 77.5
Phvul.007G158300 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 2.5e-25 118.2 71 74.6
Duzib151G0434 Durio zibethinus HOM05D006941 ORTHO05D008361 3.3e-25 117.9 70 80.0
FvH4_4g16990 Fragaria vesca HOM05D006941 ORTHO05D008361 4.3e-25 117.5 71 76.1
FAN07G2315 Fragaria x ananassa HOM05D006941 ORTHO05D008361 4.3e-25 117.5 71 76.1
FAN12G1403 Fragaria x ananassa HOM05D006941 ORTHO05D008361 4.3e-25 117.5 71 76.1
FAN12G3786 Fragaria x ananassa HOM05D006941 ORTHO05D008361 4.3e-25 117.5 71 76.1
Oeu010965.1 Olea europaea HOM05D006941 ORTHO05D008361 5.6e-25 117.1 71 76.1
Lalb_Chr22g0358511 Lupinus albus HOM05D006941 ORTHO05D008361 7.3e-25 116.7 71 76.1
Oeu029280.1 Olea europaea HOM05D006941 ORTHO05D008361 7.3e-25 116.7 71 76.1
Solyc01g067820.3 Solanum lycopersicum HOM05D006941 ORTHO05D008361 7.3e-25 116.7 71 76.1
PGSC0003DMG400022846 Solanum tuberosum HOM05D006941 ORTHO05D008361 7.3e-25 116.7 71 76.1
Lalb_Chr14g0364951 Lupinus albus HOM05D006941 ORTHO05D008361 9.5e-25 116.3 71 77.5
CANSAT78G0092 Cannabis sativa HOM05D006941 ORTHO05D008361 1.2e-24 115.9 71 74.6
Sed0004518 Sechium edule HOM05D006941 ORTHO05D008361 1.2e-24 115.9 65 81.5
HanXRQChr05g0154771 Helianthus annuus HOM05D006941 ORTHO05D008361 2.1e-24 115.2 71 77.5
Sopen01g029770 Solanum pennellii HOM05D006941 ORTHO05D008361 2.1e-24 115.2 71 74.6
Peaxi162Scf01067g00024 Petunia axillaris HOM05D006941 ORTHO05D008361 2.8e-24 114.8 71 74.6
TWI53G0190 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 2.8e-24 114.8 70 74.3
Ca_09608_v3 Cicer arietinum L. HOM05D006941 ORTHO05D008361 3.6e-24 114.4 71 73.2
Nitab4.5_0001624g0050 Nicotiana tabacum HOM05D006941 ORTHO05D008361 3.6e-24 114.4 71 74.6
Rhsim02G0014500 Rhododendron simsii HOM05D006941 ORTHO05D008361 3.6e-24 114.4 71 78.9
Actinidia32379 Actinidia chinensis HOM05D006941 ORTHO05D008361 4.7e-24 114.0 70 75.7
CSS0029112 Camellia sinensis var. sinensis HOM05D006941 ORTHO05D008361 4.7e-24 114.0 71 74.6
RcHm_v2.0_Chr4g0420661 Rosa chinensis HOM05D006941 ORTHO05D008361 4.7e-24 114.0 71 74.6
FAN17G2868 Fragaria x ananassa HOM05D006941 ORTHO05D008361 6.2e-24 113.6 71 74.6
TWI09G0325 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 6.2e-24 113.6 71 73.2
FAN22G2172 Fragaria x ananassa HOM05D006941 ORTHO05D008361 8.0e-24 113.2 71 74.6
CAN.G1327.4 Capsicum annuum HOM05D006941 ORTHO05D008361 1.1e-23 112.8 71 74.6
Psat6g067840 Pisum sativum HOM05D006941 ORTHO05D008361 2.3e-23 111.7 71 70.4
Atru.chr4.2738 Acer truncatum HOM05D006941 ORTHO05D008361 3.1e-23 111.3 71 71.8
ECA233G1626 Erigeron canadensis HOM05D006941 ORTHO05D008361 3.1e-23 111.3 71 74.6
Migut.G00223 Erythranthe guttata HOM05D006941 ORTHO05D008361 3.1e-23 111.3 71 73.2
Carub.0005s2918 Capsella rubella HOM05D006941 ORTHO05D008361 4.0e-23 110.9 68 73.5
PSO302G0016 Papaver somniferum HOM05D006941 ORTHO05D008361 6.8e-23 110.2 69 75.4
vmacro15274 Vaccinium macrocarpon HOM05D006941 ORTHO05D008361 6.8e-23 110.2 74 74.3
EL10As5g23584 Beta vulgaris HOM05D006941 ORTHO05D008361 8.9e-23 109.8 70 72.9
DCAR_030574 Daucus carota HOM05D006941 ORTHO05D008361 1.5e-22 109.0 71 70.4
Sabra07G0080600 Salix brachista HOM05D006941 ORTHO05D008361 1.5e-22 109.0 81 67.9
CARHR172790 Cardamine hirsuta HOM05D006941 ORTHO05D008361 2.0e-22 108.6 70 68.6
Medtr1g068580 Medicago truncatula HOM05D006941 ORTHO05D008361 2.6e-22 108.2 65 76.9
unitig_22.g6332 Utricularia gibba HOM05D006941 ORTHO05D008361 2.6e-22 108.2 66 75.8
C08p37290 Brassica napus HOM05D006941 ORTHO05D008361 3.4e-22 107.8 68 72.1
BolC8t51307H Brassica oleracea HOM05D006941 ORTHO05D008361 3.4e-22 107.8 68 72.1
Thhalv10006352m.g Eutrema salsugineum HOM05D006941 ORTHO05D008361 3.4e-22 107.8 69 72.5
BcaC07g42761 Brassica carinata HOM05D006941 ORTHO05D008361 4.4e-22 107.5 68 72.1
A09p54410 Brassica napus HOM05D006941 ORTHO05D008361 4.4e-22 107.5 68 70.6
BraA09t40854Z Brassica rapa HOM05D006941 ORTHO05D008361 4.4e-22 107.5 68 70.6
arahy.Tifrunner.gnm1.ann1.UB09PE Arachis hypogaea HOM05D006941 ORTHO05D008361 9.8e-22 106.3 71 73.2
Os11g0107450 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 9.8e-22 106.3 68 72.1
Sp5g00970 Schrenkiella parvula HOM05D006941 ORTHO05D008361 9.8e-22 106.3 69 71.0
arahy.Tifrunner.gnm1.ann1.DDI179 Arachis hypogaea HOM05D006941 ORTHO05D008361 1.3e-21 105.9 84 64.3
ClCG06G005480 Citrullus lanatus HOM05D006941 ORTHO05D008361 2.2e-21 105.1 79 68.4
Medtr2g005070 Medicago truncatula HOM05D006941 ORTHO05D008361 2.2e-21 105.1 64 76.6
AT3G62450 Arabidopsis thaliana HOM05D006941 ORTHO05D008361 3.7e-21 104.4 68 70.6
SalBow1G8344 Salvia bowleyana HOM05D006941 ORTHO05D008361 4.9e-21 104.0 71 67.6
AL5G45260 Arabidopsis lyrata HOM05D006941 ORTHO05D008361 8.3e-21 103.2 68 69.1
Zm00001eb163280 Zea mays HOM05D006941 ORTHO05D008361 8.3e-21 103.2 69 68.1
THA.LOC104820449 Tarenaya hassleriana HOM05D006941 ORTHO05D008361 2.4e-20 101.7 70 67.1
Os12g0106550 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 3.2e-20 101.3 69 66.7
Zm00001eb094170 Zea mays HOM05D006941 ORTHO05D008361 3.2e-20 101.3 69 66.7
Aa31LG10G16360 Aethionema arabicum HOM05D006941 ORTHO05D008361 5.4e-20 100.5 65 69.2
Lj4g0022805 Lotus japonicus HOM05D006941 ORTHO05D008361 9.2e-20 99.8 71 70.4
SGA_v2.0_scaffold57G20266 Striga asiatica HOM05D006941 ORTHO05D008361 2.1e-19 98.6 100 54.0
Hund22020 Selenicereus undatus HOM05D006941 ORTHO05D008361 4.6e-19 97.4 70 67.1
BcaB02g07336 Brassica carinata HOM05D006941 ORTHO05D008361 1.7e-18 95.5 59 74.6
SHI00325 Sapria himalayana HOM05D006941 ORTHO05D008361 1.7e-18 95.5 71 64.8
Haze_01039 Corylus avellana HOM05D006941 ORTHO05D008361 1.1e-17 92.8 71 66.2
VMungo0464G0431 Vigna mungo HOM05D006941 ORTHO05D008361 4.3e-17 90.9 130 42.3
SEGI_10041 Sequoiadendron giganteum HOM05D006941 ORTHO05D008361 7.3e-17 90.1 65 66.2
HanXRQChr15g0466771 Helianthus annuus HOM05D006941 ORTHO05D008361 1.2e-16 89.4 136 41.9
Cfa015511 Carpinus fangiana HOM05D006941 ORTHO05D008361 1.6e-16 89.0 70 64.3
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 3.6e-16 87.8 61 63.9
MD16G1176900 Malus domestica HOM05D006941 ORTHO05D008361 4.0e-15 84.3 51 78.4
PGSC0003DMG400029912 Solanum tuberosum HOM05D006941 ORTHO05D008361 2.0e-14 82.0 51 72.5
RcHm_v2.0_Chr1g0363231 Rosa chinensis HOM05D006941 ORTHO05D008361 2.9e-13 78.2 50 74.0
vmacro16859 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 3.5e-11 71.2 39 79.5
Eucgr.H03709 Eucalyptus grandis HOM05D006941 ORTHO05D008361 4.6e-11 70.9 41 75.6
Ciclev10006724m.g Citrus clementina HOM05D006941 ORTHO05D008361 7.8e-11 70.1 41 75.6
Sabra05G0058700 Salix brachista HOM05D006941 ORTHO05D008361 1.0e-10 69.7 165 30.9
BcaC07g40728 Brassica carinata HOM05D006941 ORTHO05D008361 1.3e-10 69.3 68 51.5
COL.COLO4_13955 Corchorus olitorius HOM05D006941 ORTHO05D008361 3.0e-10 68.2 40 77.5
Lsat_1_v5_gn_2_28060 Lactuca sativa HOM05D006941 ORTHO05D008361 8.6e-10 66.6 59 54.2
Sc19g0004830 Simmondsia chinensis HOM05D006941 ORTHO05D008361 8.6e-10 66.6 41 70.7
MSTRG.24772 Avicennia marina HOM05D006941 ORTHO05D008361 2.5e-09 65.1 41 65.9
SGA_v2.0_scaffold114G31931 Striga asiatica HOM05D006941 ORTHO05D008361 3.3e-09 64.7 52 53.8
Atru.chr2.2418 Acer truncatum HOM05D006941 ORTHO05D008361 4.3e-09 64.3 41 70.7
VMungo0720G2266 Vigna mungo HOM05D006941 ORTHO05D008361 7.3e-09 63.5 41 70.7
Eucgr.H03675 Eucalyptus grandis HOM05D006941 ORTHO05D008361 1.6e-08 62.4 39 66.7
Dinv16400 Davidia involucrata HOM05D006941 ORTHO05D008361 3.6e-08 61.2 35 77.1
Oeu048197.1 Olea europaea HOM05D010625 ORTHO05D008361 1.1e-07 59.7 40 65.0
Pp3c4_20400 Physcomitrium patens HOM05D006941 ORTHO05D008361 4.0e-07 57.8 67 44.8
MELO3C035183.2 Cucumis melo HOM05D006941 ORTHO05D008361 6.8e-07 57.0 30 90.0
Medtr2g048470 Medicago truncatula HOM05D006941 ORTHO05D008361 6.8e-07 57.0 36 72.2
HanXRQChr10g0285751 Helianthus annuus HOM05D006941 ORTHO05D008361 2.0e-06 55.5 31 80.6
AagrBONN_evm.TU.Sc2ySwM_344.628 Anthoceros agrestis HOM05D006941 ORTHO05D008361 2.6e-06 55.1 40 62.5
Eucgr.H03674 Eucalyptus grandis HOM05D025724 ORTHO05D008361 3.4e-06 54.7 35 68.6
Mapoly0142s0032 Marchantia polymorpha HOM05D006941 ORTHO05D008361 5.8e-06 53.9 37 64.9


User provided reference genes

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