Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p005681 Quercus lobata HOM05D005843 ORTHO05D007781 1.1e-287 992.6 510 100.0
QL11p021821 Quercus lobata HOM05D005843 ORTHO05D007781 1.4e-247 859.4 552 81.2
Haze_20785 Corylus avellana HOM05D005843 ORTHO05D007781 6.2e-235 817.4 524 79.8
CiPaw.09G192200 Carya illinoinensis HOM05D005843 ORTHO05D007781 9.0e-234 813.5 510 80.0
GSVIVG01034179001 Vitis vinifera HOM05D005843 ORTHO05D007781 2.7e-214 748.8 510 72.9
RcHm_v2.0_Chr3g0466751 Rosa chinensis HOM05D005843 ORTHO05D007781 2.1e-211 739.2 511 73.2
FAN14G2296 Fragaria x ananassa HOM05D005843 ORTHO05D007781 2.6e-209 732.3 510 71.2
Atru.chr8.1969 Acer truncatum HOM05D005843 ORTHO05D007781 7.6e-209 730.7 510 72.5
FAN05G5617 Fragaria x ananassa HOM05D005843 ORTHO05D007781 8.5e-208 727.2 510 70.6
Prupe.6G254200 Prunus persica HOM05D005843 ORTHO05D007781 9.3e-207 723.8 510 71.8
TAR633G1568 Trochodendron aralioides HOM05D005843 ORTHO05D007781 5.1e-205 718.0 511 71.2
MD12G1140900 Malus domestica HOM05D005843 ORTHO05D007781 1.8e-202 709.5 510 69.6
Manes.17G047400 Manihot esculenta HOM05D005843 ORTHO05D007781 8.5e-200 700.7 510 68.4
Duzib128G1977 Durio zibethinus HOM05D005843 ORTHO05D007781 2.5e-199 699.1 528 67.8
MD04G1127500 Malus domestica HOM05D005843 ORTHO05D007781 2.7e-198 695.7 510 69.2
Thecc.05G040300 Theobroma cacao HOM05D005843 ORTHO05D007781 1.4e-197 693.3 510 70.4
Eucgr.K03141 Eucalyptus grandis HOM05D005843 ORTHO05D007781 5.1e-197 691.4 510 66.7
Medtr7g060680 Medicago truncatula HOM05D005843 ORTHO05D007781 5.1e-197 691.4 511 66.9
Ca_26026_v3 Cicer arietinum L. HOM05D005843 ORTHO05D007781 2.0e-196 689.5 510 67.1
CsaV3_4G024980 Cucumis sativus L. HOM05D005843 ORTHO05D007781 4.4e-196 688.3 510 66.9
CANSAT35G1785 Cannabis sativa HOM05D005843 ORTHO05D007781 5.7e-196 688.0 521 66.6
Gorai.006G173000 Gossypium raimondii HOM05D005843 ORTHO05D007781 3.7e-195 685.3 510 67.3
FAN02G2362 Fragaria x ananassa HOM05D005843 ORTHO05D007781 6.3e-195 684.5 541 65.2
Gohir.A09G156300 Gossypium hirsutum HOM05D005843 ORTHO05D007781 8.2e-195 684.1 510 66.9
TPR.G23290 Trifolium pratense HOM05D005843 ORTHO05D007781 1.2e-193 680.2 510 65.7
Gohir.D09G151700 Gossypium hirsutum HOM05D005843 ORTHO05D007781 1.5e-193 679.9 510 66.7
MELO3C003129.2 Cucumis melo HOM05D005843 ORTHO05D007781 5.9e-193 677.9 510 65.5
TWI38G1602 Tripterygium wilfordii HOM05D005843 ORTHO05D007781 1.3e-192 676.8 510 67.1
Hma1.2p1_1513F.1_g288040 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 1.7e-192 676.4 510 66.5
Lalb_Chr19g0125371 Lupinus albus HOM05D005843 ORTHO05D007781 1.9e-191 672.9 513 66.7
FAN09G3893 Fragaria x ananassa HOM05D005843 ORTHO05D007781 2.5e-191 672.5 520 66.7
Nn8g39667 Nelumbo nucifera HOM05D005843 ORTHO05D007781 4.7e-190 668.3 510 66.9
Oeu024347.1 Olea europaea HOM05D005843 ORTHO05D007781 7.9e-190 667.5 510 63.9
Lj3C968G10 Lonicera japonica HOM05D005843 ORTHO05D007781 1.8e-189 666.4 548 62.6
Psat5g101400 Pisum sativum HOM05D005843 ORTHO05D007781 3.9e-189 665.2 510 64.3
Cpa.g.sc332.7 Carica papaya HOM05D005843 ORTHO05D007781 5.2e-189 664.8 510 66.9
PGR004G0455 Punica granatum HOM05D005843 ORTHO05D007781 6.7e-189 664.5 510 66.5
Cc06_g02690 Coffea canephora HOM05D005843 ORTHO05D007781 8.8e-189 664.1 510 64.5
Glyma.07G131100 Glycine max HOM05D005843 ORTHO05D007781 2.0e-188 662.9 510 65.7
ClCG04G008190 Citrullus lanatus HOM05D005843 ORTHO05D007781 1.7e-187 659.8 510 65.1
Rhsim05G0192300 Rhododendron simsii HOM05D005843 ORTHO05D007781 2.8e-187 659.1 510 66.5
VMungo1383G2898 Vigna mungo HOM05D005843 ORTHO05D007781 1.8e-186 656.4 510 65.7
PSO339G2649 Papaver somniferum HOM05D005843 ORTHO05D007781 4.1e-186 655.2 511 65.4
Phvul.008G100900 Phaseolus vulgaris HOM05D005843 ORTHO05D007781 4.5e-185 651.7 510 65.9
arahy.Tifrunner.gnm1.ann1.JAB43P Arachis hypogaea HOM05D005843 ORTHO05D007781 1.3e-184 650.2 511 65.6
Aqoxy6G01388 Aquilegia oxysepala HOM05D005843 ORTHO05D007781 8.5e-184 647.5 511 64.4
PSO151G0180 Papaver somniferum HOM05D005843 ORTHO05D007781 1.1e-183 647.1 511 64.4
Sc20g0004950 Simmondsia chinensis HOM05D005843 ORTHO05D007781 5.5e-183 644.8 510 63.7
Nitab4.5_0001190g0070 Nicotiana tabacum HOM05D005843 ORTHO05D007781 2.1e-182 642.9 511 63.8
DCAR_014847 Daucus carota HOM05D005843 ORTHO05D007781 3.0e-181 639.0 512 62.1
Sed0019468 Sechium edule HOM05D005843 ORTHO05D007781 5.2e-181 638.3 482 65.4
PGSC0003DMG400008911 Solanum tuberosum HOM05D005843 ORTHO05D007781 3.3e-180 635.6 511 63.2
Hund24578 Selenicereus undatus HOM05D005843 ORTHO05D007781 3.7e-179 632.1 510 62.5
Sopen09g005490 Solanum pennellii HOM05D005843 ORTHO05D007781 8.2e-179 630.9 511 62.2
Migut.J00332 Erythranthe guttata HOM05D005843 ORTHO05D007781 7.0e-178 627.9 510 63.1
Thhalv10013300m.g Eutrema salsugineum HOM05D005843 ORTHO05D007781 9.1e-178 627.5 513 63.4
CAN.G326.14 Capsicum annuum HOM05D005843 ORTHO05D007781 4.5e-177 625.2 511 62.2
EL10Ac3g07255 Beta vulgaris HOM05D005843 ORTHO05D007781 3.8e-176 622.1 512 62.7
ECA238G1173 Erigeron canadensis HOM05D005843 ORTHO05D007781 5.0e-176 621.7 512 61.5
A10p33250 Brassica napus HOM05D005843 ORTHO05D007781 6.5e-176 621.3 514 63.2
BolC9t60149H Brassica oleracea HOM05D005843 ORTHO05D007781 7.2e-175 617.8 515 62.3
BcaNung02129 Brassica carinata HOM05D005843 ORTHO05D007781 1.0e-173 614.0 514 62.3
A03p00670 Brassica napus HOM05D005843 ORTHO05D007781 4.0e-173 612.1 513 63.2
THA.LOC104809903 Tarenaya hassleriana HOM05D005843 ORTHO05D007781 4.0e-173 612.1 511 62.2
Solyc09g010770.3 Solanum lycopersicum HOM05D005843 ORTHO05D007781 6.8e-173 611.3 511 60.9
Peaxi162Scf00165g01322 Petunia axillaris HOM05D005843 ORTHO05D007781 8.8e-173 610.9 553 57.5
Sp6g40070 Schrenkiella parvula HOM05D005843 ORTHO05D007781 8.8e-173 610.9 513 61.8
BcaNung05922 Brassica carinata HOM05D005843 ORTHO05D007781 2.8e-171 605.9 514 61.9
BraA03t09456Z Brassica rapa HOM05D005843 ORTHO05D007781 3.7e-171 605.5 521 61.6
Carub.0006s0120 Capsella rubella HOM05D005843 ORTHO05D007781 1.1e-170 604.0 515 60.8
CARHR211000 Cardamine hirsuta HOM05D005843 ORTHO05D007781 1.1e-170 604.0 513 61.6
C03p00940 Brassica napus HOM05D005843 ORTHO05D007781 3.1e-170 602.4 511 62.6
BolC3t12656H Brassica oleracea HOM05D005843 ORTHO05D007781 3.1e-170 602.4 511 62.6
SGA_v2.0_scaffold75G24948 Striga asiatica HOM05D005843 ORTHO05D007781 5.4e-170 601.7 510 61.2
HanXRQChr16g0515781 Helianthus annuus HOM05D005843 ORTHO05D007781 1.2e-169 600.5 494 61.1
BcaC06g31988 Brassica carinata HOM05D005843 ORTHO05D007781 1.6e-169 600.1 515 61.4
CSS0035027 Camellia sinensis var. sinensis HOM05D005843 ORTHO05D007781 2.0e-169 599.7 461 67.7
BcaB01g06160 Brassica carinata HOM05D005843 ORTHO05D007781 5.9e-169 598.2 511 62.2
Lsat_1_v5_gn_2_17401 Lactuca sativa HOM05D005843 ORTHO05D007781 5.9e-169 598.2 506 58.9
AT5G02410 Arabidopsis thaliana HOM05D005843 ORTHO05D007781 1.0e-168 597.4 513 60.2
Hma1.2p1_1513F.1_g288030 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 2.3e-168 596.3 459 65.6
Dinv35609 Davidia involucrata HOM05D005843 ORTHO05D007781 5.0e-168 595.1 426 71.6
SalBow3G1829 Salvia bowleyana HOM05D005843 ORTHO05D007781 3.2e-167 592.4 509 59.3
Glyma.18G179500 Glycine max HOM05D005843 ORTHO05D007781 5.5e-167 591.7 510 61.4
AL6G11640 Arabidopsis lyrata HOM05D005843 ORTHO05D007781 6.1e-166 588.2 499 60.9
Actinidia26464 Actinidia chinensis HOM05D005843 ORTHO05D000250 2.3e-165 586.3 438 68.9
Sabra06G0064400 Salix brachista HOM05D005843 ORTHO05D007781 2.3e-165 586.3 531 60.8
Aa31LG1G22390 Aethionema arabicum HOM05D005843 ORTHO05D007781 5.4e-162 575.1 583 53.7
C09p74160 Brassica napus HOM05D005843 ORTHO05D007781 2.7e-161 572.8 485 62.5
Lj3g0024665 Lotus japonicus HOM05D005843 ORTHO05D007781 5.9e-161 571.6 451 64.1
AUR62030297 Chenopodium quinoa HOM05D005843 ORTHO05D007781 8.0e-158 561.2 590 52.9
HPP92_000805 Vanilla planifolia HOM05D005843 ORTHO05D007781 2.6e-156 556.2 511 55.8
SHI00339 Sapria himalayana HOM05D005843 ORTHO05D007781 2.6e-148 529.6 531 53.7
FvH4_6g13910 Fragaria vesca HOM05D005843 ORTHO05D007781 1.9e-143 513.5 376 68.9
AUR62015928 Chenopodium quinoa HOM05D005843 ORTHO05D007781 8.3e-139 498.0 512 52.3
unitig_26.g9195 Utricularia gibba HOM05D005843 ORTHO05D007781 1.9e-135 486.9 458 57.2
arahy.Tifrunner.gnm1.ann1.HAEF8J Arachis hypogaea HOM05D005843 ORTHO05D007781 3.1e-133 479.6 386 64.5
Os04g0503700 Oryza sativa ssp. japonica HOM05D005843 ORTHO05D007781 5.1e-128 462.2 467 51.0
Pp3c4_12410 Physcomitrium patens HOM05D005843 ORTHO05D007781 2.4e-125 453.4 519 48.2
Dinv37176 Davidia involucrata HOM05D005843 ORTHO05D007781 2.6e-124 449.9 339 66.7
SMO137G0039 Selaginella moellendorffii HOM05D005843 ORTHO05D007781 4.8e-110 402.5 523 44.6
Potri.006G084800 Populus trichocarpa HOM05D005843 ORTHO05D007781 9.0e-109 398.3 324 64.2
AUR62018365 Chenopodium quinoa HOM05D005843 ORTHO05D007781 3.1e-101 373.2 378 56.6
ATR0585G056 Amborella trichopoda HOM05D005843 ORTHO05D007781 1.1e-98 364.8 387 52.5
Mapoly0047s0019 Marchantia polymorpha HOM05D005843 ORTHO05D007781 1.1e-98 364.8 529 40.8
CDE09G0345 Ceratophyllum demersum HOM05D005843 ORTHO05D007781 2.4e-93 347.1 454 44.1
vmacro20152 Vaccinium macrocarpon HOM05D005843 ORTHO05D007781 5.0e-91 339.3 425 48.7
Zm00001eb078080 Zea mays HOM05D005843 ORTHO05D007781 3.2e-82 310.1 341 49.0
BcaC06g31987 Brassica carinata HOM05D005843 ORTHO05D007781 9.4e-82 308.5 323 54.5
Nitab4.5_0002018g0090 Nicotiana tabacum HOM05D005843 ORTHO05D007781 5.1e-80 302.8 262 61.8
A03p00710 Brassica napus HOM05D005843 ORTHO05D007781 2.0e-76 290.8 196 74.0
SGA_v2.0_scaffold75G24944 Striga asiatica HOM05D005843 ORTHO05D007781 7.7e-76 288.9 433 43.4
AagrBONN_evm.TU.Sc2ySwM_117.1914 Anthoceros agrestis HOM05D005843 ORTHO05D007781 2.2e-70 270.8 458 38.2
BcaNung05921 Brassica carinata HOM05D002515 ORTHO05D002722 6.7e-64 249.2 388 43.6
TAR636G2087 Trochodendron aralioides HOM05D005843 ORTHO05D007781 8.2e-62 242.3 184 64.7
Cre01.g041300 Chlamydomonas reinhardtii HOM05D005843 ORTHO05D007781 1.3e-54 218.4 535 32.3
CBR_g29861 Chara braunii HOM05D005843 ORTHO05D000002 1.4e-53 214.9 354 38.4
VMungo1309G2290 Vigna mungo HOM05D005843 ORTHO05D007781 1.1e-50 205.3 135 73.3
TAR636G1000 Trochodendron aralioides HOM05D005843 ORTHO05D007781 2.7e-44 184.1 126 76.2
TAR636G1324 Trochodendron aralioides HOM05D005843 ORTHO05D007781 2.7e-44 184.1 126 76.2
DCAR_015734 Daucus carota HOM05D005843 ORTHO05D007781 6.1e-41 172.9 136 58.8
AUR62040681 Chenopodium quinoa HOM05D005843 ORTHO05D007781 9.8e-31 139.0 192 41.7
VMungo1309G1664 Vigna mungo HOM05D005843 ORTHO05D007781 1.3e-27 128.6 222 40.1
Haze_26583 Corylus avellana HOM05D005843 ORTHO05D007781 1.9e-26 124.8 508 25.8
SEGI_06123 Sequoiadendron giganteum HOM05D005843 ORTHO05D007781 1.2e-23 115.5 116 50.9
DCAR_015735 Daucus carota HOM05D005843 ORTHO05D007781 3.2e-21 107.5 60 83.3
TAR636G3605 Trochodendron aralioides HOM05D005843 ORTHO05D007781 8.6e-19 99.4 57 80.7
C03p92170 Brassica napus HOM05D005843 ORTHO05D040940 1.2e-17 95.5 62 72.6
BolC3t21533H Brassica oleracea HOM05D005843 ORTHO05D040940 1.2e-17 95.5 62 72.6
Hma1.2p1_1611F.1_g293520 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 4.7e-17 93.6 53 81.1
SEGI_08652 Sequoiadendron giganteum HOM05D005843 ORTHO05D000001 3.1e-16 90.9 61 62.3
BraA10t45356Z Brassica rapa HOM05D005843 ORTHO05D007781 9.2e-13 79.3 64 56.2
SEGI_16582 Sequoiadendron giganteum HOM05D005843 ORTHO05D014789 1.2e-12 79.0 75 50.7
TAR636G0893 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.6e-12 78.6 65 56.9


User provided reference genes

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