Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p004451 Quercus lobata HOM05D003487 ORTHO05D000140 1.2e-83 313.2 159 100.0
QL01p054930 Quercus lobata HOM05D003487 ORTHO05D000140 3.6e-72 275.0 159 89.3
QL08p053984 Quercus lobata HOM05D000034 ORTHO05D000037 6.6e-26 121.3 158 42.4
Potri.015G008050 Populus trichocarpa HOM05D003487 ORTHO05D000140 1.4e-23 113.6 158 41.8
Potri.011G163248 Populus trichocarpa HOM05D003487 ORTHO05D000140 1.8e-23 113.2 158 41.8
Hma1.2p1_0148F.1_g065930 Hydrangea macrophylla HOM05D000034 ORTHO05D000140 5.2e-23 111.7 160 43.1
Potri.002G206500 Populus trichocarpa HOM05D003487 ORTHO05D000140 8.9e-23 110.9 156 41.7
Potri.009G022650 Populus trichocarpa HOM05D003487 ORTHO05D000140 8.9e-23 110.9 158 41.8
QL09p003516 Quercus lobata HOM05D000005 ORTHO05D000012 8.9e-23 110.9 160 45.6
Potri.007G059900 Populus trichocarpa HOM05D003487 ORTHO05D000140 1.2e-22 110.5 158 41.8
Hma1.2p1_1819F.1_g304060 Hydrangea macrophylla HOM05D003487 ORTHO05D000140 2.6e-22 109.4 156 41.7
Potri.012G061366 Populus trichocarpa HOM05D003487 ORTHO05D000140 3.4e-22 109.0 158 40.5
Hma1.2p1_0065F.1_g035600 Hydrangea macrophylla HOM05D000034 ORTHO05D000140 4.4e-22 108.6 160 41.9
Potri.006G196716 Populus trichocarpa HOM05D003487 ORTHO05D000140 4.4e-22 108.6 155 38.7
Hma1.2p1_0619F.1_g190440 Hydrangea macrophylla HOM05D003487 ORTHO05D000140 5.8e-22 108.2 160 42.5
Rhsim08G0145100 Rhododendron simsii HOM05D000034 ORTHO05D000037 9.9e-22 107.5 158 41.1
vmacro02377 Vaccinium macrocarpon HOM05D003487 ORTHO05D000140 1.3e-21 107.1 158 41.1
Potri.001G157750 Populus trichocarpa HOM05D003487 ORTHO05D000140 2.2e-21 106.3 155 38.7
Potri.006G202550 Populus trichocarpa HOM05D003487 ORTHO05D000140 2.2e-21 106.3 158 39.2
Hma1.2p1_0825F.1_g224780 Hydrangea macrophylla HOM05D003487 ORTHO05D000140 3.8e-21 105.5 160 41.9
Potri.001G014200 Populus trichocarpa HOM05D003487 ORTHO05D000140 6.4e-21 104.8 155 38.7
QL09p003532 Quercus lobata HOM05D000005 ORTHO05D000012 8.4e-21 104.4 155 44.5
TWI38G1585 Tripterygium wilfordii HOM05D003487 ORTHO05D000140 8.4e-21 104.4 153 43.1
Potri.006G146100 Populus trichocarpa HOM05D003487 ORTHO05D000140 1.1e-20 104.0 153 39.9
EL10Ac4g08757 Beta vulgaris HOM05D000034 ORTHO05D000037 4.2e-20 102.1 156 40.4
vmacro11918 Vaccinium macrocarpon HOM05D003487 ORTHO05D000140 4.2e-20 102.1 158 41.8
vmacro10807 Vaccinium macrocarpon HOM05D003487 ORTHO05D000140 5.4e-20 101.7 157 41.4
Hma1.2p1_0854F.1_g228980 Hydrangea macrophylla HOM05D003487 ORTHO05D000140 7.1e-20 101.3 148 42.6
EL10Ac5g12133 Beta vulgaris HOM05D003487 ORTHO05D000140 9.3e-20 100.9 156 39.7
EL10Ac6g13765 Beta vulgaris HOM05D003487 ORTHO05D000140 9.3e-20 100.9 156 40.4
QL05p002211 Quercus lobata HOM05D000034 ORTHO05D000037 9.3e-20 100.9 160 40.6
QL11p035081 Quercus lobata HOM05D000034 ORTHO05D000037 9.3e-20 100.9 160 40.6
Hund24317 Selenicereus undatus HOM05D003487 ORTHO05D000140 1.2e-19 100.5 156 39.1
QL09p053714 Quercus lobata HOM05D003487 ORTHO05D000140 1.6e-19 100.1 160 40.6
EL10Ac1g01615 Beta vulgaris HOM05D003487 ORTHO05D000140 4.6e-19 98.6 151 40.4
Nitab4.5_0006735g0070 Nicotiana tabacum HOM05D003487 ORTHO05D000140 4.6e-19 98.6 151 38.4
QL06p050752 Quercus lobata HOM05D000034 ORTHO05D000037 4.6e-19 98.6 160 40.0
QL11p043264 Quercus lobata HOM05D000034 ORTHO05D000037 4.6e-19 98.6 160 40.0
AUR62038965 Chenopodium quinoa HOM05D000034 ORTHO05D000037 6.0e-19 98.2 154 40.3
AUR62035004 Chenopodium quinoa HOM05D000034 ORTHO05D000140 1.3e-18 97.1 156 37.8
QL03p048663 Quercus lobata HOM05D003487 ORTHO05D000140 1.7e-18 96.7 148 40.5
QL93p0141_0031 Quercus lobata HOM05D003487 ORTHO05D000140 1.7e-18 96.7 148 40.5
AUR62042315 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.3e-18 96.3 154 39.6
AUR62042357 Chenopodium quinoa HOM05D003487 ORTHO05D000140 2.3e-18 96.3 151 39.1
QL02p048869 Quercus lobata HOM05D003487 ORTHO05D000140 2.3e-18 96.3 147 38.1
Nitab4.5_0000184g0260 Nicotiana tabacum HOM05D003487 ORTHO05D000140 3.0e-18 95.9 151 37.1
AUR62037304 Chenopodium quinoa HOM05D003487 ORTHO05D000140 8.7e-18 94.4 154 37.0
Nitab4.5_0003364g0100 Nicotiana tabacum HOM05D003487 ORTHO05D000140 1.5e-17 93.6 151 37.7
Potri.018G071050 Populus trichocarpa HOM05D003487 ORTHO05D000140 1.5e-17 93.6 155 36.1
AUR62027137 Chenopodium quinoa HOM05D000034 ORTHO05D000140 1.9e-17 93.2 151 37.7
AUR62040172 Chenopodium quinoa HOM05D003487 ORTHO05D000140 1.9e-17 93.2 156 36.5
Potri.004G111750 Populus trichocarpa HOM05D003487 ORTHO05D000140 1.9e-17 93.2 146 39.0
Hund31263 Selenicereus undatus HOM05D003487 ORTHO05D000140 3.3e-17 92.4 153 38.6
Potri.011G088750 Populus trichocarpa HOM05D003487 ORTHO05D000140 4.3e-17 92.0 155 36.1
Solyc12g036870.3 Solanum lycopersicum HOM05D003487 ORTHO05D000140 7.3e-17 91.3 158 36.7
AUR62013895 Chenopodium quinoa HOM05D000034 ORTHO05D000037 9.6e-17 90.9 154 38.3
Solyc10g018645.1 Solanum lycopersicum HOM05D003487 ORTHO05D000140 9.6e-17 90.9 151 37.7
AUR62019017 Chenopodium quinoa HOM05D003487 ORTHO05D000140 1.3e-16 90.5 156 36.5
AUR62031863 Chenopodium quinoa HOM05D003487 ORTHO05D000140 1.6e-16 90.1 156 37.8
Cc11_g14620 Coffea canephora HOM05D003487 ORTHO05D000140 1.6e-16 90.1 161 36.0
Hma1.2p1_0496F.1_g166260 Hydrangea macrophylla HOM05D003487 ORTHO05D000140 1.6e-16 90.1 154 37.7
AUR62026962 Chenopodium quinoa HOM05D003487 ORTHO05D000140 2.1e-16 89.7 154 37.7
QL09p003562 Quercus lobata HOM05D000005 ORTHO05D000012 2.1e-16 89.7 134 41.8
Hund12564 Selenicereus undatus HOM05D003487 ORTHO05D000140 2.1e-16 89.7 145 38.6
Sopen06g011790 Solanum pennellii HOM05D003487 ORTHO05D000140 2.1e-16 89.7 158 36.7
Hund12608 Selenicereus undatus HOM05D003487 ORTHO05D000140 2.8e-16 89.4 145 39.3
QL08p014408 Quercus lobata HOM05D003487 ORTHO05D000140 3.6e-16 89.0 141 39.7
Rhsim11G0013100 Rhododendron simsii HOM05D003487 ORTHO05D000140 4.8e-16 88.6 158 38.0
Sopen09g020440 Solanum pennellii HOM05D003487 ORTHO05D000140 6.2e-16 88.2 151 36.4
Potri.019G009855 Populus trichocarpa HOM05D003487 ORTHO05D000140 1.4e-15 87.0 148 36.5
Potri.003G047151 Populus trichocarpa HOM05D003487 ORTHO05D000140 2.4e-15 86.3 158 35.4
Rhsim13G0095900 Rhododendron simsii HOM05D003487 ORTHO05D000140 3.1e-15 85.9 143 37.8
AUR62019443 Chenopodium quinoa HOM05D003487 ORTHO05D000140 4.0e-15 85.5 143 37.8
Potri.004G108960 Populus trichocarpa HOM05D003487 ORTHO05D000140 4.0e-15 85.5 154 34.4
Hund08176 Selenicereus undatus HOM05D003487 ORTHO05D000140 4.0e-15 85.5 113 43.4
CAN.G687.22 Capsicum annuum HOM05D000541 ORTHO05D000137 5.3e-15 85.1 139 38.8
QL03p032943 Quercus lobata HOM05D003487 ORTHO05D000140 6.9e-15 84.7 160 36.2
Hund21113 Selenicereus undatus HOM05D003487 ORTHO05D000140 6.9e-15 84.7 144 38.2
Potri.004G170442 Populus trichocarpa HOM05D003487 ORTHO05D000140 1.5e-14 83.6 146 36.3
Sopen10g020570 Solanum pennellii HOM05D003487 ORTHO05D000140 2.0e-14 83.2 152 37.5
Hund18021 Selenicereus undatus HOM05D003487 ORTHO05D000140 4.4e-14 82.0 113 41.6
AUR62011688 Chenopodium quinoa HOM05D003487 ORTHO05D000140 5.8e-14 81.6 156 34.6
COL.COLO4_37060 Corchorus olitorius HOM05D003487 ORTHO05D000140 5.8e-14 81.6 159 35.8
Rhsim06G0037500 Rhododendron simsii HOM05D000122 ORTHO05D000139 5.8e-14 81.6 104 47.1
CAN.G46.12 Capsicum annuum HOM05D003487 ORTHO05D000140 7.6e-14 81.3 151 33.1
Gorai.004G071000 Gossypium raimondii HOM05D003487 ORTHO05D000140 1.3e-13 80.5 153 34.6
Hund30836 Selenicereus undatus HOM05D003487 ORTHO05D000140 1.7e-13 80.1 145 35.2
AUR62035025 Chenopodium quinoa HOM05D003487 ORTHO05D000140 2.2e-13 79.7 141 36.9
CAN.G1245.13 Capsicum annuum HOM05D003487 ORTHO05D000140 2.9e-13 79.3 145 33.8
Hma1.2p1_2665F.1_g326480 Hydrangea macrophylla HOM05D003487 ORTHO05D000140 2.9e-13 79.3 144 36.1
Hund18294 Selenicereus undatus HOM05D003487 ORTHO05D000140 3.8e-13 79.0 145 35.2
EL10Ac5g11982 Beta vulgaris HOM05D003487 ORTHO05D000140 4.9e-13 78.6 100 44.0
Hund31374 Selenicereus undatus HOM05D003487 ORTHO05D000140 4.9e-13 78.6 115 39.1
CAN.G520.2 Capsicum annuum HOM05D003487 ORTHO05D000140 8.4e-13 77.8 151 31.8
Hund31241 Selenicereus undatus HOM05D003487 ORTHO05D000140 8.4e-13 77.8 159 33.3
QL07p029340 Quercus lobata HOM05D000034 ORTHO05D000140 1.1e-12 77.4 150 35.3
Hund30962 Selenicereus undatus HOM05D003487 ORTHO05D000140 1.1e-12 77.4 145 34.5
Rhsim06G0037400 Rhododendron simsii HOM05D000122 ORTHO05D000139 3.2e-12 75.9 124 41.9
Nitab4.5_0002695g0080 Nicotiana tabacum HOM05D003487 ORTHO05D000140 4.2e-12 75.5 126 36.5
Solyc08g066480.3 Solanum lycopersicum HOM05D003487 ORTHO05D000140 4.2e-12 75.5 117 38.5
CAN.G374.4 Capsicum annuum HOM05D003487 ORTHO05D000140 5.4e-12 75.1 140 34.3
CAN.G153.17 Capsicum annuum HOM05D003487 ORTHO05D000140 7.1e-12 74.7 145 34.5
Cc00_g12070 Coffea canephora HOM05D000034 ORTHO05D000037 9.3e-12 74.3 119 37.8
Hma1.2p1_0028F.1_g017450 Hydrangea macrophylla HOM05D003487 ORTHO05D000140 9.3e-12 74.3 145 36.6
Hund03759 Selenicereus undatus HOM05D003487 ORTHO05D000140 1.2e-11 73.9 142 36.6
CAN.G1245.14 Capsicum annuum HOM05D003487 ORTHO05D000140 2.1e-11 73.2 143 31.5
Eucgr.L01297 Eucalyptus grandis HOM05D003487 ORTHO05D000140 2.1e-11 73.2 74 48.6
EL10Ac8g19661 Beta vulgaris HOM05D003487 ORTHO05D000140 3.5e-11 72.4 100 44.0
AUR62041800 Chenopodium quinoa HOM05D003487 ORTHO05D000140 4.6e-11 72.0 99 43.4
Nitab4.5_0000324g0090 Nicotiana tabacum HOM05D003487 ORTHO05D000140 4.6e-11 72.0 108 37.0
Nitab4.5_0009514g0020 Nicotiana tabacum HOM05D003487 ORTHO05D000140 4.6e-11 72.0 135 34.1
QL01p025696 Quercus lobata HOM05D003487 ORTHO05D000140 4.6e-11 72.0 153 34.6
CAN.G1070.4 Capsicum annuum HOM05D003487 ORTHO05D000140 7.9e-11 71.2 154 31.2
CAN.G401.11 Capsicum annuum HOM05D003487 ORTHO05D000140 7.9e-11 71.2 142 32.4
QL04p081319 Quercus lobata HOM05D003487 ORTHO05D000140 7.9e-11 71.2 151 35.1
QL12p042963 Quercus lobata HOM05D003487 ORTHO05D000140 7.9e-11 71.2 151 35.1
EL10Ac4g08738 Beta vulgaris HOM05D003487 ORTHO05D000140 1.0e-10 70.9 117 41.0
CAN.G112.28 Capsicum annuum HOM05D003487 ORTHO05D000140 1.0e-10 70.9 136 33.8
Gorai.008G069100 Gossypium raimondii HOM05D003487 ORTHO05D000140 1.0e-10 70.9 135 33.3
Hund01268 Selenicereus undatus HOM05D003487 ORTHO05D000140 1.0e-10 70.9 127 37.0
Hund18007 Selenicereus undatus HOM05D003487 ORTHO05D000140 1.0e-10 70.9 104 41.3
COL.COLO4_33231 Corchorus olitorius HOM05D003487 ORTHO05D000140 1.7e-10 70.1 122 38.5
vmacro08955 Vaccinium macrocarpon HOM05D003487 ORTHO05D000140 1.7e-10 70.1 126 39.7
CSS0021130 Camellia sinensis var. sinensis HOM05D003487 ORTHO05D000140 5.1e-10 68.6 108 44.4
CAN.G255.10 Capsicum annuum HOM05D003487 ORTHO05D000140 5.1e-10 68.6 140 36.4
AUR62026263 Chenopodium quinoa HOM05D003487 ORTHO05D000140 5.1e-10 68.6 125 38.4
CAN.G1125.1 Capsicum annuum HOM05D003487 ORTHO05D000140 6.6e-10 68.2 136 31.6
CAN.G81.4 Capsicum annuum HOM05D003487 ORTHO05D000140 1.5e-09 67.0 140 31.4
Nitab4.5_0002082g0050 Nicotiana tabacum HOM05D003487 ORTHO05D000140 2.5e-09 66.2 151 31.1
Aqoxy1G02676 Aquilegia oxysepala HOM05D003487 ORTHO05D000140 3.3e-09 65.9 150 32.7
CAN.G13.2 Capsicum annuum HOM05D003487 ORTHO05D000140 3.3e-09 65.9 116 33.6
CAN.G741.45 Capsicum annuum HOM05D003487 ORTHO05D000140 5.6e-09 65.1 135 34.8
Gorai.013G128800 Gossypium raimondii HOM05D003487 ORTHO05D000140 5.6e-09 65.1 125 34.4
Aqoxy5G03479 Aquilegia oxysepala HOM05D003487 ORTHO05D000140 1.3e-08 63.9 152 30.9
CAN.G629.2 Capsicum annuum HOM05D003487 ORTHO05D000140 1.3e-08 63.9 151 32.5
AUR62035836 Chenopodium quinoa HOM05D000034 ORTHO05D000140 1.3e-08 63.9 127 35.4
Aqoxy2G01690 Aquilegia oxysepala HOM05D003487 ORTHO05D000140 1.6e-08 63.5 150 29.3
CAN.G153.6 Capsicum annuum HOM05D003487 ORTHO05D000140 1.6e-08 63.5 76 40.8
TAR362G0812 Trochodendron aralioides HOM05D024515 ORTHO05D012445 1.6e-08 63.5 161 32.3
Potri.010G215600 Populus trichocarpa HOM05D003487 ORTHO05D000140 1.1e-07 60.8 102 38.2
vmacro08490 Vaccinium macrocarpon HOM05D003487 ORTHO05D000140 1.1e-07 60.8 150 32.7
AUR62038372 Chenopodium quinoa HOM05D003487 ORTHO05D000140 1.8e-07 60.1 93 41.9
CAN.G362.4 Capsicum annuum HOM05D000275 ORTHO05D000181 2.4e-07 59.7 109 32.1
Potri.005G130601 Populus trichocarpa HOM05D003487 ORTHO05D000140 2.4e-07 59.7 108 36.1
Hund11036 Selenicereus undatus HOM05D003487 ORTHO05D000140 3.1e-07 59.3 127 34.6
CAN.G854.11 Capsicum annuum HOM05D003487 ORTHO05D000140 5.3e-07 58.5 125 32.0
Nn2g14680 Nelumbo nucifera HOM05D000665 ORTHO05D000140 6.9e-07 58.2 165 27.3
AUR62014982 Chenopodium quinoa HOM05D003487 ORTHO05D000140 9.0e-07 57.8 139 32.4
AUR62025483 Chenopodium quinoa HOM05D003487 ORTHO05D000140 9.0e-07 57.8 134 32.8
Nn7g37837 Nelumbo nucifera HOM05D019910 ORTHO05D000140 9.0e-07 57.8 94 37.2
CAN.G535.17 Capsicum annuum HOM05D003487 ORTHO05D000140 2.0e-06 56.6 146 28.8
Aqoxy3G01887 Aquilegia oxysepala HOM05D003487 ORTHO05D000140 5.8e-06 55.1 137 31.4
vmacro22792 Vaccinium macrocarpon HOM05D002841 ORTHO05D003158 5.8e-06 55.1 140 27.9


User provided reference genes

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