Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p002505 Quercus lobata HOM05D007072 ORTHO05D008841 2.7e-112 408.7 210 100.0
Haze_00902 Corylus avellana HOM05D007072 ORTHO05D008841 1.6e-96 356.3 210 85.7
Haze_03895 Corylus avellana HOM05D007072 ORTHO05D008841 1.0e-95 353.6 210 85.2
CiPaw.01G165800 Carya illinoinensis HOM05D007072 ORTHO05D008841 1.9e-89 332.8 212 80.7
Dinv13993 Davidia involucrata HOM05D007072 ORTHO05D008841 2.6e-78 295.8 207 74.4
GSVIVG01017974001 Vitis vinifera HOM05D007072 ORTHO05D008841 4.9e-77 291.6 207 73.9
Prupe.1G013400 Prunus persica HOM05D007072 ORTHO05D008841 9.5e-73 277.3 210 71.0
CSS0014065 Camellia sinensis var. sinensis HOM05D007072 ORTHO05D008841 1.2e-72 276.9 201 71.1
Atru.ctg752_3.79 Acer truncatum HOM05D007072 ORTHO05D008841 4.7e-72 275.0 197 72.1
Rhsim04G0202300 Rhododendron simsii HOM05D007072 ORTHO05D008841 8.3e-69 264.2 192 72.4
Nn4g26321 Nelumbo nucifera HOM05D007072 ORTHO05D008841 2.4e-68 262.7 212 69.3
Actinidia40146 Actinidia chinensis HOM05D007072 ORTHO05D008841 5.4e-68 261.5 178 73.6
MD16G1193700 Malus domestica HOM05D007072 ORTHO05D008841 7.1e-68 261.2 204 68.1
TAR636G0958 Trochodendron aralioides HOM05D007072 ORTHO05D008841 2.7e-67 259.2 203 70.0
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 3.0e-66 255.8 179 74.9
Thecc.04G231900 Theobroma cacao HOM05D007072 ORTHO05D008841 3.0e-66 255.8 202 67.3
MELO3C012648.2 Cucumis melo HOM05D007072 ORTHO05D008841 6.6e-66 254.6 210 67.1
Duzib212G0309 Durio zibethinus HOM05D007072 ORTHO05D008841 8.6e-66 254.2 207 66.2
COL.COLO4_04736 Corchorus olitorius HOM05D007072 ORTHO05D008841 1.1e-65 253.8 208 67.3
Potri.008G152800 Populus trichocarpa HOM05D007072 ORTHO05D008841 1.1e-65 253.8 207 68.6
Eucgr.L01273 Eucalyptus grandis HOM05D007072 ORTHO05D008841 1.9e-65 253.1 208 66.8
CsaV3_7G022520 Cucumis sativus L. HOM05D007072 ORTHO05D008841 2.5e-65 252.7 212 67.5
Phvul.007G057300 Phaseolus vulgaris HOM05D007072 ORTHO05D008841 3.3e-65 252.3 210 65.7
CANSAT78G1446 Cannabis sativa HOM05D007072 ORTHO05D008841 5.6e-65 251.5 178 74.7
Hma1.2p1_1344F.1_g277130 Hydrangea macrophylla HOM05D007072 ORTHO05D008841 5.6e-65 251.5 207 64.7
ClCG06G006220 Citrullus lanatus HOM05D007072 ORTHO05D008841 7.3e-65 251.1 207 65.7
Ca_10901_v3 Cicer arietinum L. HOM05D007072 ORTHO05D008841 1.6e-64 250.0 207 66.7
Glyma.07G018200 Glycine max HOM05D007072 ORTHO05D008841 2.1e-64 249.6 207 65.7
Eucgr.L02492 Eucalyptus grandis HOM05D007072 ORTHO05D008841 3.6e-64 248.8 205 66.3
Glyma.08G203200 Glycine max HOM05D007072 ORTHO05D008841 8.1e-64 247.7 207 64.7
VMungo0720G2696 Vigna mungo HOM05D007072 ORTHO05D008841 1.1e-63 247.3 207 65.7
arahy.Tifrunner.gnm1.ann1.0J3LZT Arachis hypogaea HOM05D007072 ORTHO05D008841 1.4e-63 246.9 208 65.9
arahy.Tifrunner.gnm1.ann1.KKZ0LN Arachis hypogaea HOM05D007072 ORTHO05D008841 1.4e-63 246.9 208 65.9
RcHm_v2.0_Chr4g0416241 Rosa chinensis HOM05D007072 ORTHO05D008841 6.8e-63 244.6 205 65.4
TWI09G0189 Tripterygium wilfordii HOM05D007072 ORTHO05D008841 6.8e-63 244.6 207 68.6
arahy.Tifrunner.gnm1.ann1.8ZA7N6 Arachis hypogaea HOM05D007072 ORTHO05D008841 1.2e-62 243.8 208 66.3
Sabra08G0116400 Salix brachista HOM05D007072 ORTHO05D008841 1.2e-62 243.8 235 60.4
DCAR_030636 Daucus carota HOM05D007072 ORTHO05D008841 7.6e-62 241.1 182 68.7
FvH4_4g15520 Fragaria vesca HOM05D007072 ORTHO05D008841 1.7e-61 240.0 207 65.7
FAN12G0870 Fragaria x ananassa HOM05D007072 ORTHO05D008841 1.7e-61 240.0 207 65.7
Medtr1g103810 Medicago truncatula HOM05D007072 ORTHO05D008841 1.7e-61 240.0 189 69.3
PGSC0003DMG400030078 Solanum tuberosum HOM05D007072 ORTHO05D008841 2.9e-61 239.2 210 62.9
TPR.G5523 Trifolium pratense HOM05D007072 ORTHO05D008841 4.9e-61 238.4 208 65.4
Manes.03G178700 Manihot esculenta HOM05D007072 ORTHO05D008841 6.4e-61 238.0 207 66.2
CAN.G490.4 Capsicum annuum HOM05D007072 ORTHO05D008841 2.4e-60 236.1 210 63.3
Sc19g0004160 Simmondsia chinensis HOM05D007072 ORTHO05D008841 5.4e-60 235.0 207 61.4
FAN07G0953 Fragaria x ananassa HOM05D007072 ORTHO05D008841 7.1e-60 234.6 207 64.3
PGR142G1968 Punica granatum HOM05D007072 ORTHO05D008841 1.2e-59 233.8 205 63.4
Lj3A735T48 Lonicera japonica HOM05D007072 ORTHO05D008841 2.1e-59 233.0 201 64.7
Cc03_g03760 Coffea canephora HOM05D007072 ORTHO05D008841 3.5e-59 232.3 185 62.2
arahy.Tifrunner.gnm1.ann1.DZ7G8Z Arachis hypogaea HOM05D007072 ORTHO05D008841 4.6e-59 231.9 222 60.8
ECA240G2950 Erigeron canadensis HOM05D007072 ORTHO05D008841 7.8e-59 231.1 207 61.4
Psat6g207520 Pisum sativum HOM05D007072 ORTHO05D008841 7.8e-59 231.1 210 62.9
PSO675G2050 Papaver somniferum HOM05D007072 ORTHO05D008841 1.7e-58 229.9 196 63.8
Peaxi162Scf00092g01012 Petunia axillaris HOM05D007072 ORTHO05D008841 1.7e-58 229.9 182 68.1
Solyc09g076030.4 Solanum lycopersicum HOM05D007072 ORTHO05D008841 3.0e-58 229.2 210 61.4
Sopen09g030860 Solanum pennellii HOM05D007072 ORTHO05D008841 3.0e-58 229.2 210 61.4
Oeu031231.1 Olea europaea HOM05D007072 ORTHO05D008841 8.7e-58 227.6 171 69.6
Lj5g0010864 Lotus japonicus HOM05D007072 ORTHO05D008841 1.1e-57 227.3 207 61.8
HanXRQChr03g0062521 Helianthus annuus HOM05D007072 ORTHO05D008841 1.5e-57 226.9 207 59.9
Aqoxy5G00468 Aquilegia oxysepala HOM05D007072 ORTHO05D008841 1.9e-57 226.5 209 61.7
Sed0002009 Sechium edule HOM05D007072 ORTHO05D008841 4.3e-57 225.3 222 59.0
Gohir.A10G168700 Gossypium hirsutum HOM05D007072 ORTHO05D008841 1.6e-56 223.4 205 62.4
Gorai.011G195700 Gossypium raimondii HOM05D007072 ORTHO05D008841 3.6e-56 222.2 205 62.0
Gohir.D10G174900 Gossypium hirsutum HOM05D007072 ORTHO05D008841 1.4e-55 220.3 205 62.0
SalBow2G0955 Salvia bowleyana HOM05D007072 ORTHO05D008841 1.4e-55 220.3 209 61.2
Lsat_1_v5_gn_7_66201 Lactuca sativa HOM05D007072 ORTHO05D008841 9.0e-55 217.6 183 63.9
THA.LOC104800963 Tarenaya hassleriana HOM05D007072 ORTHO05D008841 3.4e-54 215.7 205 59.0
Nitab4.5_0000043g0120 Nicotiana tabacum HOM05D007072 ORTHO05D008841 5.8e-54 214.9 181 67.4
PSO732G0121 Papaver somniferum HOM05D007072 ORTHO05D008841 1.7e-53 213.4 193 61.1
Hund12130 Selenicereus undatus HOM05D007072 ORTHO05D008841 2.9e-53 212.6 173 65.9
EL10Ac2g03959 Beta vulgaris HOM05D007072 ORTHO05D008841 1.9e-52 209.9 173 66.5
Migut.G00337 Erythranthe guttata HOM05D007072 ORTHO05D008841 1.9e-52 209.9 212 59.0
Rhsim04G0202400 Rhododendron simsii HOM05D007072 ORTHO05D008841 2.4e-52 209.5 146 74.7
Actinidia27161 Actinidia chinensis HOM05D007072 ORTHO05D008841 3.2e-52 209.1 189 58.7
Sp1g04270 Schrenkiella parvula HOM05D007072 ORTHO05D008841 3.2e-52 209.1 198 60.6
ATR0733G024 Amborella trichopoda HOM05D007072 ORTHO05D008841 1.2e-51 207.2 180 62.2
BcaB02g06864 Brassica carinata HOM05D007072 ORTHO05D008841 2.1e-51 206.5 198 60.1
EL10Ac4g08230 Beta vulgaris HOM05D007072 ORTHO05D008841 2.7e-51 206.1 173 65.9
Aa31LG1G19230 Aethionema arabicum HOM05D007072 ORTHO05D008841 4.6e-51 205.3 203 57.1
AUR62034750 Chenopodium quinoa HOM05D007072 ORTHO05D008841 6.0e-51 204.9 171 64.3
Thhalv10008840m.g Eutrema salsugineum HOM05D007072 ORTHO05D008841 1.9e-49 199.9 170 64.7
SGA_v2.0_scaffold124G33503 Striga asiatica HOM05D007072 ORTHO05D008841 2.5e-49 199.5 199 59.3
FAN22G0737 Fragaria x ananassa HOM05D007072 ORTHO05D008841 3.3e-49 199.1 153 70.6
BolC5t29149H Brassica oleracea HOM05D007072 ORTHO05D008841 1.3e-48 197.2 200 58.0
C05p03740 Brassica napus HOM05D007072 ORTHO05D008841 1.6e-48 196.8 200 58.0
Lalb_Chr02g0140581 Lupinus albus HOM05D007072 ORTHO05D008841 3.6e-48 195.7 141 74.5
Carub.0001s0473 Capsella rubella HOM05D007072 ORTHO05D008841 4.8e-48 195.3 187 61.0
BraA10t42680Z Brassica rapa HOM05D007072 ORTHO05D008841 6.2e-48 194.9 163 66.3
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 3.1e-47 192.6 161 64.6
A10p04090 Brassica napus HOM05D007072 ORTHO05D008841 5.3e-47 191.8 163 65.6
AT1G05385 Arabidopsis thaliana HOM05D007072 ORTHO05D008841 9.0e-47 191.0 184 61.4
AL1G15220 Arabidopsis lyrata HOM05D007072 ORTHO05D008841 2.0e-46 189.9 133 75.2
Ah.04g154560 Amaranthus hybridus HOM05D007072 ORTHO05D008841 4.5e-46 188.7 140 70.7
AUR62033624 Chenopodium quinoa HOM05D007072 ORTHO05D008841 7.6e-46 188.0 135 71.9
CARHR004900 Cardamine hirsuta HOM05D007072 ORTHO05D008841 9.9e-46 187.6 171 62.6
HPP92_001955 Vanilla planifolia HOM05D007072 ORTHO05D008841 9.3e-44 181.0 180 56.7
Zm00001eb214960 Zea mays HOM05D007072 ORTHO05D008841 1.0e-42 177.6 180 57.2
Os03g0747700 Oryza sativa ssp. japonica HOM05D007072 ORTHO05D008841 2.5e-41 172.9 137 67.2
CDE10G0502 Ceratophyllum demersum HOM05D007072 ORTHO05D008841 7.9e-35 151.4 100 77.0
Pp3c8_18010 Physcomitrium patens HOM05D007072 ORTHO05D008841 1.8e-34 150.2 176 48.9
Mapoly0045s0091 Marchantia polymorpha HOM05D007072 ORTHO05D008841 2.3e-34 149.8 206 44.7
Nitab4.5_0001560g0030 Nicotiana tabacum HOM05D007072 ORTHO05D008841 4.3e-33 145.6 135 60.7
SMO347G0486 Selaginella moellendorffii HOM05D007072 ORTHO05D008841 6.9e-31 138.3 137 51.8
CBR_g41625 Chara braunii HOM05D007072 ORTHO05D008841 1.4e-28 130.6 142 45.8
RcHm_v2.0_Chr4g0430981 Rosa chinensis HOM05D007072 ORTHO05D008841 7.1e-28 128.3 106 63.2
SEGI_01006 Sequoiadendron giganteum HOM05D007072 ORTHO05D008841 2.5e-25 119.8 91 63.7
MBI05_g43294_MAGBIO Magnolia biondii HOM05D007072 ORTHO05D008841 2.2e-21 106.7 69 79.7
AagrBONN_evm.TU.Sc2ySwM_228.1232 Anthoceros agrestis HOM05D007072 ORTHO05D008841 3.3e-17 92.8 158 37.3


User provided reference genes

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