Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p002223 Quercus lobata HOM05D007425 ORTHO05D009334 7.9e-86 320.5 169 100.0
Haze_00892 Corylus avellana HOM05D007425 ORTHO05D009334 4.5e-49 198.4 171 69.6
CiPaw.01G166700 Carya illinoinensis HOM05D007425 ORTHO05D009334 1.0e-48 197.2 181 64.1
Cfa015652 Carpinus fangiana HOM05D007425 ORTHO05D009334 5.0e-48 194.9 172 68.6
RcHm_v2.0_Chr7g0190521 Rosa chinensis HOM05D007425 ORTHO05D009334 1.5e-39 166.8 175 60.0
MD16G1194500 Malus domestica HOM05D007425 ORTHO05D009334 4.2e-39 165.2 183 58.5
FAN13G1551 Fragaria x ananassa HOM05D007425 ORTHO05D009334 2.1e-38 162.9 171 56.1
MD13G1193800 Malus domestica HOM05D007425 ORTHO05D009334 1.2e-36 157.1 177 58.2
Prupe.1G014400 Prunus persica HOM05D007425 ORTHO05D009334 4.4e-36 155.2 182 56.0
FAN04G2988 Fragaria x ananassa HOM05D007425 ORTHO05D009334 2.2e-35 152.9 166 56.6
Potri.008G153400 Populus trichocarpa HOM05D007425 ORTHO05D009334 3.1e-34 149.1 171 54.4
FvH4_5g07900 Fragaria vesca HOM05D007425 ORTHO05D009334 7.0e-34 147.9 165 57.0
FAN18G2754 Fragaria x ananassa HOM05D007425 ORTHO05D009334 7.0e-34 147.9 165 57.0
TAR636G0682 Trochodendron aralioides HOM05D007425 ORTHO05D009334 1.0e-32 144.1 166 58.4
Sabra08G0117000 Salix brachista HOM05D007425 ORTHO05D009334 2.9e-32 142.5 177 53.1
Atru.chr4.2458 Acer truncatum HOM05D007425 ORTHO05D009334 6.6e-32 141.4 184 51.1
Hma1.2p1_0275F.1_g110893 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 2.5e-31 139.4 114 66.7
Hma1.2p1_0275F.1_g110900 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 2.5e-31 139.4 114 66.7
Nn4g26476 Nelumbo nucifera HOM05D007425 ORTHO05D009334 7.3e-31 137.9 182 52.7
Dinv13997 Davidia involucrata HOM05D001000 ORTHO05D002976 6.1e-30 134.8 113 67.3
PGR142G3696 Punica granatum HOM05D007425 ORTHO05D009334 8.0e-30 134.4 183 49.7
COL.COLO4_21483 Corchorus olitorius HOM05D007425 ORTHO05D009334 1.0e-29 134.0 175 54.9
Rhsim04G0201800 Rhododendron simsii HOM05D007425 ORTHO05D009334 8.9e-29 131.0 185 47.0
CSS0011351 Camellia sinensis var. sinensis HOM05D007425 ORTHO05D009334 1.2e-28 130.6 181 47.0
Lj3P734T17 Lonicera japonica HOM05D007425 ORTHO05D009334 2.6e-28 129.4 174 53.4
Thecc.04G232500 Theobroma cacao HOM05D007425 ORTHO05D009334 2.6e-28 129.4 176 54.5
CANSAT78G0262 Cannabis sativa HOM05D007425 ORTHO05D009334 4.4e-28 128.6 177 52.5
AUR62033636 Chenopodium quinoa HOM05D007425 ORTHO05D009334 5.8e-28 128.3 172 48.3
Sed0025719 Sechium edule HOM05D007425 ORTHO05D009334 7.5e-28 127.9 180 48.9
Gohir.D09G218600 Gossypium hirsutum HOM05D007425 ORTHO05D009334 9.8e-28 127.5 175 53.1
THA.LOC104803027 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 1.3e-27 127.1 185 50.8
Eucgr.L01274 Eucalyptus grandis HOM05D007425 ORTHO05D009334 1.7e-27 126.7 124 60.5
Gorai.006G239600 Gossypium raimondii HOM05D007425 ORTHO05D009334 1.7e-27 126.7 171 52.6
THA.LOC104822268 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 1.7e-27 126.7 185 48.1
HanXRQChr08g0229221 Helianthus annuus HOM05D007425 ORTHO05D009334 2.2e-27 126.3 85 80.0
Eucgr.L02493 Eucalyptus grandis HOM05D007425 ORTHO05D009334 3.7e-27 125.6 179 49.7
BcaNung00324 Brassica carinata HOM05D007425 ORTHO05D009334 6.4e-27 124.8 177 48.0
C01p28260 Brassica napus HOM05D007425 ORTHO05D009334 6.4e-27 124.8 172 49.4
BcaC09g50166 Brassica carinata HOM05D007425 ORTHO05D009334 8.3e-27 124.4 172 49.4
BolC1t02755H Brassica oleracea HOM05D007425 ORTHO05D009334 8.3e-27 124.4 172 49.4
BraA01t02180Z Brassica rapa HOM05D007425 ORTHO05D009334 8.3e-27 124.4 172 50.0
Duzib212G0056 Durio zibethinus HOM05D007425 ORTHO05D009334 8.3e-27 124.4 177 52.5
PGSC0003DMG400032277 Solanum tuberosum HOM05D007425 ORTHO05D009334 8.3e-27 124.4 85 78.8
Sopen09g030940 Solanum pennellii HOM05D007425 ORTHO05D009334 1.1e-26 124.0 191 49.2
Gohir.A09G216200 Gossypium hirsutum HOM05D007425 ORTHO05D009334 2.4e-26 122.9 175 51.4
Zm00001eb375110 Zea mays HOM05D007425 ORTHO05D009334 2.4e-26 122.9 176 48.3
PSO170G1990 Papaver somniferum HOM05D007425 ORTHO05D009334 3.2e-26 122.5 164 49.4
SGA_v2.0_scaffold39G15229 Striga asiatica HOM05D007425 ORTHO05D009334 3.2e-26 122.5 103 68.0
EL10Ac3g06446 Beta vulgaris HOM05D007425 ORTHO05D009334 4.1e-26 122.1 170 50.0
DCAR_002385 Daucus carota HOM05D007425 ORTHO05D009334 4.1e-26 122.1 168 48.2
Duzib151G0901 Durio zibethinus HOM05D007425 ORTHO05D009334 5.4e-26 121.7 178 52.2
Aa31LG9G2430 Aethionema arabicum HOM05D007425 ORTHO05D009334 7.0e-26 121.3 181 47.0
Ah.14g089400 Amaranthus hybridus HOM05D007425 ORTHO05D009334 7.0e-26 121.3 176 49.4
Cpa.g.sc9.287 Carica papaya HOM05D007425 ORTHO05D009334 7.0e-26 121.3 178 47.2
Cc03_g03840 Coffea canephora HOM05D007425 ORTHO05D009334 7.0e-26 121.3 181 46.4
Nitab4.5_0004258g0010 Nicotiana tabacum HOM05D007425 ORTHO05D009334 7.0e-26 121.3 188 49.5
Eucgr.B01085 Eucalyptus grandis HOM05D007425 ORTHO05D009334 9.2e-26 120.9 106 65.1
LjContig00408g0025154 Lotus japonicus HOM05D007425 ORTHO05D009334 9.2e-26 120.9 97 63.9
AL7G40980 Arabidopsis lyrata HOM05D007425 ORTHO05D009334 1.6e-25 120.2 175 49.7
MSTRG.24738 Avicennia marina HOM05D007425 ORTHO05D009334 1.6e-25 120.2 137 54.7
MELO3C006532.2 Cucumis melo HOM05D007425 ORTHO05D009334 1.6e-25 120.2 186 44.6
CsaV3_3G013300 Cucumis sativus L. HOM05D007425 ORTHO05D009334 1.6e-25 120.2 186 45.7
Manes.03G178200 Manihot esculenta HOM05D007425 ORTHO05D009334 2.0e-25 119.8 172 48.3
PSO017G2433 Papaver somniferum HOM05D007425 ORTHO05D009334 2.0e-25 119.8 153 52.9
CARHR221470 Cardamine hirsuta HOM05D007425 ORTHO05D009334 2.7e-25 119.4 176 50.6
Sed0000110 Sechium edule HOM05D007425 ORTHO05D009334 2.7e-25 119.4 177 48.0
Lsat_1_v5_gn_9_18440 Lactuca sativa HOM05D007425 ORTHO05D009334 3.5e-25 119.0 85 74.1
SalBow3G4464 Salvia bowleyana HOM05D007425 ORTHO05D009334 3.5e-25 119.0 94 70.2
ECA247G1832 Erigeron canadensis HOM05D007425 ORTHO05D009334 4.6e-25 118.6 91 69.2
VMungo1215G1239 Vigna mungo HOM05D007425 ORTHO05D009334 4.6e-25 118.6 159 52.2
Migut.G00341 Erythranthe guttata HOM05D007425 ORTHO05D009334 7.8e-25 117.9 108 64.8
Oeu031224.1 Olea europaea HOM05D007425 ORTHO05D009334 1.0e-24 117.5 179 47.5
Oeu031227.1 Olea europaea HOM05D007425 ORTHO05D009334 1.0e-24 117.5 179 47.5
Oeu031228.1 Olea europaea HOM05D007425 ORTHO05D009334 1.0e-24 117.5 179 47.5
Phvul.002G045100 Phaseolus vulgaris HOM05D007425 ORTHO05D009334 3.0e-24 115.9 120 60.8
Sp7g13010 Schrenkiella parvula HOM05D007425 ORTHO05D009334 3.0e-24 115.9 183 48.6
CAN.G490.15 Capsicum annuum HOM05D007425 ORTHO05D009334 5.0e-24 115.2 72 81.9
arahy.Tifrunner.gnm1.ann1.CGGZ98 Arachis hypogaea HOM05D007425 ORTHO05D009334 8.6e-24 114.4 83 71.1
Aqoxy7G02632 Aquilegia oxysepala HOM05D007425 ORTHO05D009334 1.5e-23 113.6 118 59.3
Psat2g124560 Pisum sativum HOM05D007425 ORTHO05D009334 1.5e-23 113.6 147 50.3
Sc13g0004450 Simmondsia chinensis HOM05D007425 ORTHO05D009334 1.5e-23 113.6 177 48.6
Glyma.01G237800 Glycine max HOM05D007425 ORTHO05D009334 2.5e-23 112.8 151 51.7
Medtr5g038520 Medicago truncatula HOM05D007425 ORTHO05D009334 2.5e-23 112.8 122 54.1
Ca_04746_v3 Cicer arietinum L. HOM05D007425 ORTHO05D009334 7.3e-23 111.3 75 74.7
Carub.0007s2724 Capsella rubella HOM05D007425 ORTHO05D009334 1.2e-22 110.5 123 56.9
CDE04G2079 Ceratophyllum demersum HOM05D007425 ORTHO05D009334 2.8e-22 109.4 63 84.1
Thhalv10026366m.g Eutrema salsugineum HOM05D007425 ORTHO05D009334 4.7e-22 108.6 179 48.6
MBI16_g00841_MAGBIO Magnolia biondii HOM05D007425 ORTHO05D009334 4.7e-22 108.6 158 51.9
TAR636G0596 Trochodendron aralioides HOM05D007425 ORTHO05D009334 6.2e-22 108.2 64 84.4
AT4G14870 Arabidopsis thaliana HOM05D007425 ORTHO05D009334 8.0e-22 107.8 181 47.5
Ciclev10006055m.g Citrus clementina HOM05D007425 ORTHO05D009334 1.2e-20 104.0 179 45.3
unitig_32.g10818 Utricularia gibba HOM05D007425 ORTHO05D009334 1.5e-20 103.6 108 63.9
HPP92_010419 Vanilla planifolia HOM05D007425 ORTHO05D009334 2.0e-20 103.2 139 49.6
Nitab4.5_0000043g0080 Nicotiana tabacum HOM05D007425 ORTHO05D009334 2.6e-20 102.8 168 48.2
ATR0626G045 Amborella trichopoda HOM05D007425 ORTHO05D009334 1.7e-19 100.1 160 46.2
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 1.1e-18 97.4 86 67.4
Lalb_Chr05g0211001 Lupinus albus HOM05D007425 ORTHO05D009334 5.4e-18 95.1 84 60.7
Os04g0306750 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 1.6e-17 93.6 60 76.7
SEGI_06187 Sequoiadendron giganteum HOM05D007425 ORTHO05D009334 2.3e-16 89.7 61 72.1
AUR62034746 Chenopodium quinoa HOM05D007425 ORTHO05D009334 1.1e-13 80.9 130 43.1
Pp3c2_27330 Physcomitrium patens HOM05D007425 ORTHO05D009334 1.8e-13 80.1 93 49.5
Os08g0399050 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 8.9e-13 77.8 75 60.0
SMO358G0357 Selaginella moellendorffii HOM05D013303 ORTHO05D015288 4.9e-11 72.0 151 39.7
Mapoly0070s0085 Marchantia polymorpha HOM05D007425 ORTHO05D009334 3.2e-10 69.3 108 42.6
CDE07G0184 Ceratophyllum demersum HOM05D007425 ORTHO05D009334 5.6e-07 58.5 124 37.1
CBR_g18894 Chara braunii HOM05D007425 ORTHO05D009334 9.5e-07 57.8 98 33.7


User provided reference genes

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