Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p000574 Quercus lobata HOM05D008144 ORTHO05D010081 0.0e+00 1671.8 877 100.0
CiPaw.01G194000 Carya illinoinensis HOM05D008144 ORTHO05D010081 3.7e-219 765.8 875 56.2
Haze_11249 Corylus avellana HOM05D008144 ORTHO05D010081 1.3e-195 687.6 947 50.8
Potri.008G159200 Populus trichocarpa HOM05D008144 ORTHO05D010081 2.7e-113 414.1 904 36.8
Potri.010G081000 Populus trichocarpa HOM05D008144 ORTHO05D010081 4.7e-105 386.7 896 36.8
Sabra08G0121300 Salix brachista HOM05D008144 ORTHO05D010081 5.9e-100 369.8 882 35.9
Prupe.1G023500 Prunus persica HOM05D008144 ORTHO05D010081 5.2e-96 356.7 884 35.0
Dinv14059 Davidia involucrata HOM05D008144 ORTHO05D010081 4.8e-94 350.1 867 35.9
Duzib212G0503 Durio zibethinus HOM05D008144 ORTHO05D010081 3.6e-89 334.0 891 35.0
Thecc.04G241000 Theobroma cacao HOM05D008144 ORTHO05D010081 7.5e-87 326.2 929 33.5
Duzib151G0265 Durio zibethinus HOM05D008144 ORTHO05D010081 5.4e-77 293.5 897 33.0
TAR362G0851 Trochodendron aralioides HOM05D008144 ORTHO05D010081 1.9e-74 285.0 974 31.0
MD13G1201700 Malus domestica HOM05D008144 ORTHO05D010081 7.3e-74 283.1 871 33.0
GSVIVG01018069001 Vitis vinifera HOM05D008144 ORTHO05D010081 4.9e-70 270.4 767 32.7
Dinv44593 Davidia involucrata HOM05D008144 ORTHO05D010081 1.6e-68 265.4 826 31.0
Ciclev10004664m.g Citrus clementina HOM05D008144 ORTHO05D010081 3.3e-66 257.7 577 35.9
COL.COLO4_13184 Corchorus olitorius HOM05D008144 ORTHO05D010081 1.8e-64 251.9 882 31.3
Manes.03G171900 Manihot esculenta HOM05D008144 ORTHO05D010081 2.0e-63 248.4 1137 28.0
CSS0041819 Camellia sinensis var. sinensis HOM05D008144 ORTHO05D010081 1.4e-61 242.3 864 30.8
RcHm_v2.0_Chr4g0388601 Rosa chinensis HOM05D008144 ORTHO05D010081 3.1e-56 224.6 746 32.6
Atru.chr4.2325 Acer truncatum HOM05D008144 ORTHO05D010081 8.9e-56 223.0 326 46.0
FvH4_4g01740 Fragaria vesca HOM05D008144 ORTHO05D010081 3.5e-52 211.1 857 30.7
FAN17G0986 Fragaria x ananassa HOM05D008144 ORTHO05D010081 5.1e-51 207.2 930 29.6
FAN17G1249 Fragaria x ananassa HOM05D008144 ORTHO05D010081 5.1e-51 207.2 930 29.6
FAN12G1940 Fragaria x ananassa HOM05D008144 ORTHO05D010081 4.3e-50 204.1 1053 27.4
TWI73G1171 Tripterygium wilfordii HOM05D008144 ORTHO05D010081 1.4e-48 199.1 925 27.1
Glyma.02G002200 Glycine max HOM05D008144 ORTHO05D010081 2.3e-48 198.4 907 28.3
CANSAT78G0891 Cannabis sativa HOM05D008144 ORTHO05D010081 6.8e-48 196.8 935 27.4
VMungo0720G0769 Vigna mungo HOM05D008144 ORTHO05D010081 1.9e-45 188.7 900 28.4
FAN22G0807 Fragaria x ananassa HOM05D008144 ORTHO05D010081 2.4e-45 188.3 951 28.1
Gohir.A02G034700 Gossypium hirsutum HOM05D008144 ORTHO05D010081 4.1e-45 187.6 824 28.6
Gohir.D02G041500 Gossypium hirsutum HOM05D008144 ORTHO05D010081 5.1e-43 180.6 836 28.1
Lj6g0001132 Lotus japonicus HOM05D008144 ORTHO05D010081 4.3e-42 177.6 713 30.2
MD16G1202000 Malus domestica HOM05D008144 ORTHO05D010081 1.4e-40 172.6 272 41.9
Gorai.005G045900 Gossypium raimondii HOM05D008144 ORTHO05D010081 1.8e-40 172.2 826 27.8
Medtr1g041300 Medicago truncatula HOM05D008144 ORTHO05D010081 1.2e-36 159.5 708 29.2
TPR.G32783 Trifolium pratense HOM05D008144 ORTHO05D010081 9.0e-32 143.3 866 26.7
Lalb_Chr03g0037551 Lupinus albus HOM05D008144 ORTHO05D010081 1.5e-31 142.5 904 25.9
Dinv33607 Davidia involucrata HOM05D008144 ORTHO05D010081 3.0e-27 128.3 135 48.9
Psat6g103240 Pisum sativum HOM05D008144 ORTHO05D010081 1.2e-23 116.3 186 41.9
Eucgr.H03407 Eucalyptus grandis HOM05D008144 ORTHO05D010081 5.8e-23 114.0 450 29.6
Cpa.g.sc44.134 Carica papaya HOM05D008144 ORTHO05D010081 7.6e-23 113.6 836 26.2
TAR633G0610 Trochodendron aralioides HOM05D008144 ORTHO05D010081 1.7e-22 112.5 278 34.5
Sed0006870 Sechium edule HOM05D025894 ORTHO05D010081 1.1e-21 109.8 463 29.4
Phvul.007G278800 Phaseolus vulgaris HOM05D008144 ORTHO05D010081 3.5e-20 104.8 731 24.8
Peaxi162Scf00758g00019 Petunia axillaris HOM05D014400 ORTHO05D010081 3.9e-19 101.3 793 24.1
DCAR_002363 Daucus carota HOM05D008144 ORTHO05D010081 1.1e-18 99.8 434 26.3
ClCG05G004780 Citrullus lanatus HOM05D025894 ORTHO05D010081 3.3e-18 98.2 949 23.6
PGR004G2389 Punica granatum HOM05D008144 ORTHO05D010081 9.6e-18 96.7 867 24.7
Nitab4.5_0002118g0020 Nicotiana tabacum HOM05D014400 ORTHO05D010081 5.3e-16 90.9 532 27.4
Oeu009118.1 Olea europaea HOM05D008144 ORTHO05D010081 5.3e-16 90.9 185 36.2
PGSC0003DMG400006073 Solanum tuberosum HOM05D014400 ORTHO05D010081 5.3e-16 90.9 853 24.2
Nitab4.5_0000224g0080 Nicotiana tabacum HOM05D014400 ORTHO05D010081 1.5e-15 89.4 772 25.1
Dinv14057 Davidia involucrata HOM05D008144 ORTHO05D010081 1.1e-13 83.2 158 39.9
Solyc09g082900.3 Solanum lycopersicum HOM05D014400 ORTHO05D010081 5.5e-13 80.9 756 24.7
Sopen09g031740 Solanum pennellii HOM05D014400 ORTHO05D010081 9.3e-13 80.1 847 23.8
Nn1g02499 Nelumbo nucifera HOM05D008144 ORTHO05D010081 1.6e-12 79.3 1149 22.5
Migut.N00217 Erythranthe guttata HOM05D014400 ORTHO05D010081 7.9e-12 77.0 157 35.7
CsaV3_3G012810 Cucumis sativus L. HOM05D025894 ORTHO05D010081 3.0e-11 75.1 900 23.7
THA.LOC104809081 Tarenaya hassleriana HOM05D011210 ORTHO05D013204 6.7e-11 73.9 169 32.5
Actinidia04502 Actinidia chinensis HOM05D008144 ORTHO05D010081 9.6e-10 70.1 841 23.9
SalBow3G2772 Salvia bowleyana HOM05D014400 ORTHO05D010081 1.6e-09 69.3 326 24.8
Aqoxy2G03478 Aquilegia oxysepala HOM05D008144 ORTHO05D031257 4.8e-09 67.8 859 23.1
MELO3C006492.2 Cucumis melo HOM05D025894 ORTHO05D010081 1.4e-08 66.2 911 22.4
Actinidia14081 Actinidia chinensis HOM05D008144 ORTHO05D010081 5.3e-08 64.3 98 39.8
Sabra10G0062200 Salix brachista HOM05D008144 ORTHO05D010081 6.5e-06 57.4 208 31.2
MD16G1201900 Malus domestica HOM05D008144 ORTHO05D010081 8.5e-06 57.0 77 45.5
SGA_v2.0_scaffold308G48120 Striga asiatica HOM05D014400 ORTHO05D010081 8.5e-06 57.0 363 25.6


User provided reference genes

Program Settings