Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p088896 Quercus lobata HOM05D007715 ORTHO05D009760 2.5e-172 608.6 292 100.0
Haze_16178 Corylus avellana HOM05D007715 ORTHO05D009760 7.4e-116 421.0 294 72.1
Cfa003439 Carpinus fangiana HOM05D007715 ORTHO05D009760 3.7e-115 418.7 294 71.4
Manes.14G008300 Manihot esculenta HOM05D007715 ORTHO05D009760 6.3e-107 391.3 292 66.1
CiPaw.02G129300 Carya illinoinensis HOM05D007715 ORTHO05D009760 2.4e-106 389.4 294 66.3
MD09G1165400 Malus domestica HOM05D007715 ORTHO05D009760 6.5e-104 381.3 292 65.1
Ciclev10032622m.g Citrus clementina HOM05D007715 ORTHO05D009760 1.5e-103 380.2 292 63.7
Eucgr.F04031 Eucalyptus grandis HOM05D007715 ORTHO05D009760 3.2e-103 379.0 292 64.0
CiPaw.01G208900 Carya illinoinensis HOM05D007715 ORTHO05D009760 4.2e-103 378.6 285 67.4
Thecc.06G056700 Theobroma cacao HOM05D007715 ORTHO05D009760 2.1e-102 376.3 292 63.4
TAR383G0241 Trochodendron aralioides HOM05D007715 ORTHO05D009760 3.6e-102 375.6 287 63.8
RcHm_v2.0_Chr2g0149371 Rosa chinensis HOM05D007715 ORTHO05D009760 6.1e-102 374.8 292 63.4
Gohir.D06G121500 Gossypium hirsutum HOM05D007715 ORTHO05D009760 8.0e-102 374.4 289 64.4
CANSAT01G2071 Cannabis sativa HOM05D007715 ORTHO05D009760 1.8e-101 373.2 292 61.3
Duzib235G0054 Durio zibethinus HOM05D007715 ORTHO05D009760 1.8e-101 373.2 292 63.0
Nn2g12750 Nelumbo nucifera HOM05D007715 ORTHO05D009760 1.8e-101 373.2 292 63.0
Gorai.010G141800 Gossypium raimondii HOM05D007715 ORTHO05D009760 3.0e-101 372.5 289 64.0
FvH4_6g36931 Fragaria vesca HOM05D007715 ORTHO05D009760 6.7e-101 371.3 292 62.3
Cpa.g.sc176.1 Carica papaya HOM05D007715 ORTHO05D009760 1.5e-100 370.2 303 59.7
MBI16_g18218_MAGBIO Magnolia biondii HOM05D007715 ORTHO05D009760 2.0e-100 369.8 284 63.4
FAN05G4144 Fragaria x ananassa HOM05D007715 ORTHO05D009760 4.4e-100 368.6 292 62.3
FAN14G5785 Fragaria x ananassa HOM05D007715 ORTHO05D009760 7.5e-100 367.9 292 62.0
CSS0043564 Camellia sinensis var. sinensis HOM05D007715 ORTHO05D009760 9.7e-100 367.5 293 62.1
Potri.008G004500 Populus trichocarpa HOM05D007715 ORTHO05D009760 1.3e-99 367.1 293 62.1
MD17G1162300 Malus domestica HOM05D007715 ORTHO05D009760 1.4e-98 363.6 280 63.6
FAN09G0474 Fragaria x ananassa HOM05D007715 ORTHO05D009760 2.4e-98 362.8 292 61.3
vmacro18742 Vaccinium macrocarpon HOM05D007715 ORTHO05D009760 7.0e-98 361.3 295 60.3
FAN02G3529 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.2e-97 360.5 291 61.5
GSVIVG01029551001 Vitis vinifera HOM05D007715 ORTHO05D009760 1.7e-96 356.7 292 61.6
Aqoxy7G02738 Aquilegia oxysepala HOM05D007715 ORTHO05D009760 2.9e-96 355.9 287 59.9
Atru.BG.168.p Acer truncatum HOM05D007715 ORTHO05D009760 6.5e-96 354.8 267 65.2
Actinidia38809 Actinidia chinensis HOM05D007715 ORTHO05D009760 2.5e-95 352.8 291 60.1
Hund18594 Selenicereus undatus HOM05D007715 ORTHO05D009760 2.5e-95 352.8 285 61.4
Hma1.2p1_1111F.1_g258440 Hydrangea macrophylla HOM05D007715 ORTHO05D009760 3.2e-95 352.4 293 60.4
PGR102G0299 Punica granatum HOM05D007715 ORTHO05D009760 4.2e-95 352.1 274 63.5
Sc12g0011180 Simmondsia chinensis HOM05D007715 ORTHO05D009760 1.6e-94 350.1 279 59.9
EL10Ac7g18154 Beta vulgaris HOM05D007715 ORTHO05D009760 2.1e-94 349.7 282 59.2
AUR62025668 Chenopodium quinoa HOM05D007715 ORTHO05D009760 4.4e-92 342.0 287 57.8
Cc04_g00030 Coffea canephora HOM05D007715 ORTHO05D009760 1.3e-91 340.5 292 58.2
Oeu049631.2 Olea europaea HOM05D007715 ORTHO05D009760 1.8e-90 336.7 273 59.3
Oeu049632.1 Olea europaea HOM05D007715 ORTHO05D009760 1.8e-90 336.7 273 59.3
PSO423G0174 Papaver somniferum HOM05D007715 ORTHO05D009760 3.1e-90 335.9 288 56.2
AUR62001337 Chenopodium quinoa HOM05D007715 ORTHO05D009760 5.4e-90 335.1 285 57.5
Medtr4g005360 Medicago truncatula HOM05D007715 ORTHO05D009760 5.9e-89 331.6 278 58.6
CDE05G1192 Ceratophyllum demersum HOM05D007715 ORTHO05D004987 1.9e-87 326.6 293 56.0
ATR0626G044 Amborella trichopoda HOM05D007715 ORTHO05D009760 3.2e-87 325.9 282 56.0
SalBow6G7190 Salvia bowleyana HOM05D007715 ORTHO05D009760 9.5e-87 324.3 280 54.3
Lsat_1_v5_gn_4_89140 Lactuca sativa HOM05D007715 ORTHO05D009760 3.0e-85 319.3 280 55.0
Rhsim08G0250500 Rhododendron simsii HOM05D007715 ORTHO05D009760 1.2e-84 317.4 291 55.3
Lj3g0002381 Lotus japonicus HOM05D007715 ORTHO05D009760 4.1e-82 308.9 292 54.5
PGSC0003DMG400009165 Solanum tuberosum HOM05D007715 ORTHO05D009760 9.2e-82 307.8 285 54.4
SGA_v2.0_scaffold71G23984 Striga asiatica HOM05D007715 ORTHO05D009760 7.7e-81 304.7 280 52.5
Psat7g265440 Pisum sativum HOM05D007715 ORTHO05D009760 6.6e-80 301.6 279 53.0
Lalb_Chr01g0011671 Lupinus albus HOM05D007715 ORTHO05D009760 3.3e-79 299.3 288 53.8
Zm00001eb102140 Zea mays HOM05D007715 ORTHO05D009760 9.5e-79 297.7 279 50.5
Sabra08G0002100 Salix brachista HOM05D007715 ORTHO05D009760 6.8e-77 291.6 293 52.9
HPP92_017384 Vanilla planifolia HOM05D007715 ORTHO05D009760 2.6e-76 289.7 260 53.5
Migut.I01201 Erythranthe guttata HOM05D007715 ORTHO05D009760 3.7e-75 285.8 281 49.8
SEGI_32597 Sequoiadendron giganteum HOM05D007715 ORTHO05D009760 8.3e-75 284.6 284 51.8
Glyma.08G224700 Glycine max HOM05D007715 ORTHO05D009760 1.7e-72 276.9 284 51.8
Duzib192G0685 Durio zibethinus HOM05D007715 ORTHO05D009760 3.9e-72 275.8 231 59.7
Sp3g18290 Schrenkiella parvula HOM05D007715 ORTHO05D009760 5.0e-72 275.4 293 49.5
AagrBONN_evm.TU.Sc2ySwM_228.4113 Anthoceros agrestis HOM05D007715 ORTHO05D009760 4.7e-70 268.9 279 48.7
Thhalv10020156m.g Eutrema salsugineum HOM05D003198 ORTHO05D009760 2.3e-69 266.5 276 50.7
Pp3c3_690 Physcomitrium patens HOM05D007715 ORTHO05D009760 3.4e-68 262.7 278 46.8
Mapoly0008s0087 Marchantia polymorpha HOM05D007715 ORTHO05D009760 1.3e-67 260.8 283 47.0
C05p44060 Brassica napus HOM05D007715 ORTHO05D009760 3.7e-67 259.2 294 47.3
VMungo0331G1382 Vigna mungo HOM05D007715 ORTHO05D009760 7.0e-66 255.0 289 48.1
A05p28660 Brassica napus HOM05D007715 ORTHO05D009760 2.7e-65 253.1 294 45.9
BraA05t21742Z Brassica rapa HOM05D007715 ORTHO05D009760 6.0e-65 251.9 294 45.9
Nitab4.5_0005739g0020 Nicotiana tabacum HOM05D007715 ORTHO05D009760 8.6e-64 248.1 235 54.0
BolC5t33128H Brassica oleracea HOM05D007715 ORTHO05D009760 3.3e-63 246.1 288 46.5
FAN20G1905 Fragaria x ananassa HOM05D007715 ORTHO05D009760 2.6e-60 236.5 211 58.3
Lj9C542G6 Lonicera japonica HOM05D007715 ORTHO05D009760 1.7e-59 233.8 274 46.0
MSTRG.22499 Avicennia marina HOM05D007715 ORTHO05D009760 1.9e-58 230.3 263 46.4
Phvul.010G164200 Phaseolus vulgaris HOM05D007715 ORTHO05D009760 2.4e-58 229.9 289 44.3
Prupe.3G023100 Prunus persica HOM05D007715 ORTHO05D009760 1.2e-57 227.6 124 83.9
Dinv20335 Davidia involucrata HOM05D007715 ORTHO05D009760 1.6e-57 227.3 158 69.0
Gohir.A06G117200 Gossypium hirsutum HOM05D007715 ORTHO05D009760 2.7e-57 226.5 135 77.0
PSO423G0098 Papaver somniferum HOM05D007715 ORTHO05D009760 1.2e-44 184.5 222 45.0
Nitab4.5_0005664g0070 Nicotiana tabacum HOM05D007715 ORTHO05D009760 2.2e-43 180.3 255 39.2
COL.COLO4_31152 Corchorus olitorius HOM05D007715 ORTHO05D009760 2.1e-41 173.7 99 81.8
Peaxi162Scf00038g02642 Petunia axillaris HOM05D007715 ORTHO05D009760 3.9e-40 169.5 100 77.0
Actinidia21887 Actinidia chinensis HOM05D007702 ORTHO05D009736 2.6e-36 156.8 136 56.6
SMO201G0133 Selaginella moellendorffii HOM05D007715 ORTHO05D009760 2.2e-35 153.7 249 36.9
Carub.0003s2020 Capsella rubella HOM05D007715 ORTHO05D009760 5.1e-32 142.5 187 40.1
TPR.G38750 Trifolium pratense HOM05D007715 ORTHO05D009760 3.2e-26 123.2 87 62.1
Medtr4g005380 Medicago truncatula HOM05D007715 ORTHO05D009760 1.9e-23 114.0 81 59.3
TPR.G38822 Trifolium pratense HOM05D007715 ORTHO05D009760 6.2e-22 109.0 87 60.9
Os09g0497600 Oryza sativa ssp. japonica HOM05D007715 ORTHO05D009760 1.1e-21 108.2 67 62.7
Sopen03g041710 Solanum pennellii HOM05D007715 ORTHO05D009760 1.5e-20 104.4 262 32.1
Psat7g265240 Pisum sativum HOM05D007122 ORTHO05D008918 1.3e-16 91.3 60 66.7
Actinidia21654 Actinidia chinensis HOM05D007715 ORTHO05D009760 3.9e-16 89.7 95 49.5
Solyc03g123970.1 Solanum lycopersicum HOM05D007715 ORTHO05D009760 3.3e-07 60.1 53 62.3


User provided reference genes

Program Settings