Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p085130 Quercus lobata HOM05D007341 ORTHO05D009075 1.5e-98 362.8 182 100.0
Cfa002160 Carpinus fangiana HOM05D007341 ORTHO05D009075 8.6e-62 240.7 182 72.0
Haze_16246 Corylus avellana HOM05D007341 ORTHO05D009075 3.6e-60 235.3 180 69.4
CiPaw.01G092200 Carya illinoinensis HOM05D007341 ORTHO05D009075 9.8e-58 227.3 153 77.8
FvH4_6g36350 Fragaria vesca HOM05D007341 ORTHO05D009075 1.3e-54 216.9 154 72.1
FAN02G2832 Fragaria x ananassa HOM05D007341 ORTHO05D009075 1.7e-54 216.5 154 72.1
FAN09G2851 Fragaria x ananassa HOM05D007341 ORTHO05D009075 2.5e-53 212.6 149 72.5
Prupe.3G028000 Prunus persica HOM05D007341 ORTHO05D009075 2.5e-53 212.6 189 63.0
TWI12G0959 Tripterygium wilfordii HOM05D007341 ORTHO05D009075 1.0e-51 207.2 114 86.8
RcHm_v2.0_Chr2g0148351 Rosa chinensis HOM05D007341 ORTHO05D009075 5.2e-51 204.9 154 68.2
Sabra07G0002700 Salix brachista HOM05D007341 ORTHO05D009075 8.9e-51 204.1 196 62.2
Duzib235G0177 Durio zibethinus HOM05D007341 ORTHO05D009075 4.4e-50 201.8 182 61.0
MD09G1169800 Malus domestica HOM05D007341 ORTHO05D009075 4.4e-50 201.8 156 68.6
Gorai.009G121500 Gossypium raimondii HOM05D007341 ORTHO05D009075 9.8e-50 200.7 183 62.3
Gohir.A05G116700 Gossypium hirsutum HOM05D007341 ORTHO05D009075 1.7e-49 199.9 183 61.7
Gohir.D05G117600 Gossypium hirsutum HOM05D007341 ORTHO05D009075 3.7e-49 198.7 183 61.2
GSVIVG01029444001 Vitis vinifera HOM05D007341 ORTHO05D009075 3.2e-48 195.7 103 90.3
MELO3C019561.2 Cucumis melo HOM05D007341 ORTHO05D009075 4.1e-48 195.3 100 89.0
Potri.007G003600 Populus trichocarpa HOM05D007341 ORTHO05D009075 3.5e-47 192.2 191 59.7
Thecc.06G049400 Theobroma cacao HOM05D007341 ORTHO05D009075 3.5e-47 192.2 182 61.0
Dinv20313 Davidia involucrata HOM05D007341 ORTHO05D009075 4.6e-47 191.8 183 59.0
Glyma.15G000400 Glycine max HOM05D007341 ORTHO05D009075 4.6e-47 191.8 120 79.2
Sed0003722 Sechium edule HOM05D007341 ORTHO05D009075 1.0e-46 190.7 97 88.7
CsaV3_3G018050 Cucumis sativus L. HOM05D007341 ORTHO05D009075 1.7e-46 189.9 93 92.5
CSS0015626 Camellia sinensis var. sinensis HOM05D007341 ORTHO05D009075 8.6e-46 187.6 112 79.5
Eucgr.F04060 Eucalyptus grandis HOM05D007341 ORTHO05D009075 8.6e-46 187.6 122 73.0
Phvul.005G082000 Phaseolus vulgaris HOM05D007341 ORTHO05D009075 8.6e-46 187.6 120 76.7
CANSAT01G1666 Cannabis sativa HOM05D007341 ORTHO05D009075 3.3e-45 185.7 189 54.5
TAR636G1203 Trochodendron aralioides HOM05D007341 ORTHO05D009075 4.3e-45 185.3 146 66.4
Hma1.2p1_0422F.1_g150100 Hydrangea macrophylla HOM05D007341 ORTHO05D009075 5.6e-45 184.9 128 72.7
Ciclev10029418m.g Citrus clementina HOM05D007341 ORTHO05D009075 1.2e-44 183.7 102 83.3
Cc06_g16890 Coffea canephora HOM05D007341 ORTHO05D009075 3.6e-44 182.2 157 61.1
HanXRQChr03g0072101 Helianthus annuus HOM05D007341 ORTHO05D009075 6.2e-44 181.4 100 85.0
Lsat_1_v5_gn_9_114620 Lactuca sativa HOM05D007341 ORTHO05D009075 6.2e-44 181.4 100 85.0
DCAR_027600 Daucus carota HOM05D007341 ORTHO05D009075 8.9e-43 177.6 177 55.4
Medtr6g004140 Medicago truncatula HOM05D007341 ORTHO05D009075 2.0e-42 176.4 127 68.5
THA.LOC104808109 Tarenaya hassleriana HOM05D007341 ORTHO05D009075 2.6e-42 176.0 183 51.4
PGR102G3137 Punica granatum HOM05D007341 ORTHO05D009075 3.4e-42 175.6 154 61.0
Nitab4.5_0000349g0220 Nicotiana tabacum HOM05D007341 ORTHO05D009075 7.5e-42 174.5 95 85.3
PGSC0003DMG400019203 Solanum tuberosum HOM05D007341 ORTHO05D009075 7.5e-42 174.5 140 65.0
Sopen10g035850 Solanum pennellii HOM05D007341 ORTHO05D009075 9.8e-42 174.1 140 64.3
Solyc10g086470.2 Solanum lycopersicum HOM05D007341 ORTHO05D009075 1.7e-41 173.3 140 64.3
ECA240G2002 Erigeron canadensis HOM05D007341 ORTHO05D009075 2.9e-41 172.6 150 62.7
Lalb_Chr24g0392671 Lupinus albus HOM05D007341 ORTHO05D009075 2.9e-41 172.6 136 65.4
FAN14G2925 Fragaria x ananassa HOM05D007341 ORTHO05D009075 4.9e-41 171.8 154 62.3
FAN14G4935 Fragaria x ananassa HOM05D007341 ORTHO05D009075 4.9e-41 171.8 154 62.3
Migut.K00075 Erythranthe guttata HOM05D007341 ORTHO05D009075 6.4e-41 171.4 140 67.1
MSTRG.26115 Avicennia marina HOM05D007341 ORTHO05D009075 3.2e-40 169.1 110 75.5
Thhalv10019269m.g Eutrema salsugineum HOM05D007341 ORTHO05D009075 4.1e-40 168.7 185 53.5
Sp5g34040 Schrenkiella parvula HOM05D007341 ORTHO05D009075 4.6e-39 165.2 185 51.4
BcaC08g45393 Brassica carinata HOM05D007341 ORTHO05D009075 1.3e-38 163.7 185 53.5
C06p30240 Brassica napus HOM05D007341 ORTHO05D009075 1.3e-38 163.7 185 53.5
BolC6t38187H Brassica oleracea HOM05D007341 ORTHO05D009075 1.3e-38 163.7 185 53.5
Actinidia38822 Actinidia chinensis HOM05D007341 ORTHO05D009075 1.7e-38 163.3 133 69.9
Aqoxy7G02561 Aquilegia oxysepala HOM05D007341 ORTHO05D009075 1.7e-38 163.3 126 66.7
LjContig00482g0010930 Lotus japonicus HOM05D007341 ORTHO05D009075 3.0e-38 162.5 149 61.1
BcaB02g07190 Brassica carinata HOM05D007341 ORTHO05D009075 3.9e-38 162.2 185 51.4
Carub.0002s2586 Capsella rubella HOM05D007341 ORTHO05D009075 3.9e-38 162.2 120 69.2
VMungo1080G1509 Vigna mungo HOM05D007341 ORTHO05D009075 3.9e-38 162.2 106 77.4
unitig_748.g7237 Utricularia gibba HOM05D007341 ORTHO05D009075 5.1e-38 161.8 130 64.6
AT1G78995 Arabidopsis thaliana HOM05D007341 ORTHO05D009075 6.6e-38 161.4 189 50.8
A07p27380 Brassica napus HOM05D007341 ORTHO05D009075 8.6e-38 161.0 186 52.2
CARHR072660 Cardamine hirsuta HOM05D007341 ORTHO05D009075 8.6e-38 161.0 118 66.9
BraA07t30379Z Brassica rapa HOM05D007341 ORTHO05D009075 1.9e-37 159.8 185 52.4
AL2G39450 Arabidopsis lyrata HOM05D007341 ORTHO05D009075 2.5e-37 159.5 98 77.6
AUR62001305 Chenopodium quinoa HOM05D007341 ORTHO05D009075 1.2e-36 157.1 122 66.4
CDE05G1356 Ceratophyllum demersum HOM05D007341 ORTHO05D009075 2.8e-36 156.0 120 64.2
AUR62025687 Chenopodium quinoa HOM05D007341 ORTHO05D009075 3.6e-36 155.6 140 60.7
HPP92_026441 Vanilla planifolia HOM05D007341 ORTHO05D009075 4.7e-36 155.2 134 63.4
Pp3c15_22740 Physcomitrium patens HOM05D007341 ORTHO05D009075 8.1e-36 154.5 115 64.3
EL10Ac7g18105 Beta vulgaris HOM05D007341 ORTHO05D009075 1.1e-35 154.1 147 59.2
ATR0626G096 Amborella trichopoda HOM05D007341 ORTHO05D009075 4.0e-35 152.1 121 66.1
ClCG05G010440 Citrullus lanatus HOM05D007341 ORTHO05D009075 5.2e-35 151.8 84 84.5
SGA_v2.0_scaffold94G28462 Striga asiatica HOM05D007341 ORTHO05D009075 8.9e-35 151.0 109 69.7
Nn8g41280 Nelumbo nucifera HOM05D007341 ORTHO05D009075 7.6e-34 147.9 158 55.1
Mapoly0061s0126 Marchantia polymorpha HOM05D007341 ORTHO05D009075 2.2e-33 146.4 151 54.3
Cpa.g.sc4293.1 Carica papaya HOM05D007341 ORTHO05D009075 8.4e-33 144.4 75 88.0
Hund18551 Selenicereus undatus HOM05D007341 ORTHO05D009075 1.1e-32 144.1 181 47.5
Zm00001eb227230 Zea mays HOM05D007341 ORTHO05D009075 5.4e-32 141.7 113 63.7
PSO170G4447 Papaver somniferum HOM05D007341 ORTHO05D009075 1.0e-30 137.5 129 58.9
PSO063G2737 Papaver somniferum HOM05D007341 ORTHO05D009075 1.1e-29 134.0 154 51.3
SMO232G0085 Selaginella moellendorffii HOM05D007341 ORTHO05D009075 1.9e-29 133.3 119 57.1
DCAR_011722 Daucus carota HOM05D007341 ORTHO05D009075 3.3e-29 132.5 181 43.6
Nitab4.5_0001911g0010 Nicotiana tabacum HOM05D007341 ORTHO05D009075 4.0e-27 125.6 152 50.0
Os06g0704200 Oryza sativa ssp. japonica HOM05D007341 ORTHO05D009075 2.0e-26 123.2 120 58.3
Sc16g0003760 Simmondsia chinensis HOM05D007341 ORTHO05D009075 2.0e-26 123.2 132 56.8
Sabra14G0002900 Salix brachista HOM05D007341 ORTHO05D009075 2.6e-26 122.9 88 70.5
Manes.06G177800 Manihot esculenta HOM05D007341 ORTHO05D009075 2.2e-25 119.8 154 52.6
vmacro18722 Vaccinium macrocarpon HOM05D007341 ORTHO05D009075 7.8e-23 111.3 124 52.4
Oeu004021.1 Olea europaea HOM05D007341 ORTHO05D009075 3.9e-22 109.0 93 66.7
Rhsim08G0252300 Rhododendron simsii HOM05D000912 ORTHO05D009075 6.6e-22 108.2 96 64.6
C02p36120 Brassica napus HOM05D007341 ORTHO05D009075 8.7e-22 107.8 65 73.8
Psat6g000680 Pisum sativum HOM05D007341 ORTHO05D009075 2.5e-21 106.3 89 68.5
Peaxi162Scf00330g00029 Petunia axillaris HOM05D007341 ORTHO05D009075 1.3e-20 104.0 195 42.6
SalBow1G8719 Salvia bowleyana HOM05D007341 ORTHO05D009075 3.1e-19 99.4 115 53.9
Cre01.g000800 Chlamydomonas reinhardtii HOM05D007341 ORTHO05D009075 1.2e-18 97.4 119 39.5
Aa31LG4G1990 Aethionema arabicum HOM05D007341 ORTHO05D009075 2.6e-18 96.3 150 42.7
Lj9A544T49 Lonicera japonica HOM05D007341 ORTHO05D009075 2.6e-18 96.3 85 64.7
SalBow1G7986 Salvia bowleyana HOM05D007341 ORTHO05D009075 2.6e-18 96.3 92 60.9
Os02g0138100 Oryza sativa ssp. japonica HOM05D007341 ORTHO05D009075 9.9e-18 94.4 83 56.6
MCO04G269 Micromonas commoda HOM05D007341 ORTHO05D009075 8.4e-17 91.3 111 42.3
MBI13_g34919_MAGBIO Magnolia biondii HOM05D007341 ORTHO05D009075 3.2e-16 89.4 79 64.6
AagrBONN_evm.TU.Sc2ySwM_368.1307 Anthoceros agrestis HOM05D007341 ORTHO05D009075 1.8e-14 83.6 65 64.6
Ah.08g218010 Amaranthus hybridus HOM05D007341 ORTHO05D009075 6.7e-14 81.6 125 44.0
PRCOL_00000561 Prasinoderma coloniale HOM05D007341 ORTHO05D009075 4.3e-13 79.0 115 40.0
Zm00001eb231900 Zea mays HOM05D007341 ORTHO05D009075 7.6e-10 68.2 115 37.4


User provided reference genes

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