Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p082671 Quercus lobata HOM05D000336 ORTHO05D015325 7.3e-72 273.9 146 100.0
QL05p052872 Quercus lobata HOM05D000336 ORTHO05D000593 4.3e-40 168.3 108 87.0
QL07p005503 Quercus lobata HOM05D005387 ORTHO05D006711 1.4e-27 126.7 67 95.5
CiPaw.09G131900 Carya illinoinensis HOM05D000336 ORTHO05D000593 9.1e-22 107.5 112 61.6
Manes.15G116300 Manihot esculenta HOM05D000336 ORTHO05D000593 3.2e-19 99.0 108 61.1
Manes.17G063000 Manihot esculenta HOM05D000336 ORTHO05D000593 1.1e-16 90.5 120 55.0
Ca_00499_v3 Cicer arietinum L. HOM05D000336 ORTHO05D000593 2.0e-16 89.7 122 52.5
Nitab4.5_0003714g0120 Nicotiana tabacum HOM05D000018 ORTHO05D000593 3.3e-16 89.0 114 50.9
GSVIVG01021322001 Vitis vinifera HOM05D000336 ORTHO05D000593 3.3e-16 89.0 116 53.4
TAR627G0947 Trochodendron aralioides HOM05D000336 ORTHO05D000593 4.4e-16 88.6 117 56.4
TWI09G0926 Tripterygium wilfordii HOM05D000336 ORTHO05D000593 2.2e-15 86.3 115 50.4
Peaxi162Scf01375g00012 Petunia axillaris HOM05D000336 ORTHO05D000593 3.7e-15 85.5 116 49.1
Solyc02g071510.3 Solanum lycopersicum HOM05D000336 ORTHO05D000593 3.7e-15 85.5 118 50.0
Sopen02g020540 Solanum pennellii HOM05D000336 ORTHO05D000593 3.7e-15 85.5 118 50.0
Hma1.2p1_0012F.1_g007690 Hydrangea macrophylla HOM05D000336 ORTHO05D000593 4.8e-15 85.1 122 53.3
PGSC0003DMG400007228 Solanum tuberosum HOM05D000336 ORTHO05D000593 6.3e-15 84.7 117 49.6
Nitab4.5_0004447g0050 Nicotiana tabacum HOM05D000018 ORTHO05D000593 8.2e-15 84.3 98 53.1
CAN.G257.98 Capsicum annuum HOM05D000336 ORTHO05D000593 1.4e-14 83.6 113 49.6
Psat1g192520 Pisum sativum HOM05D000336 ORTHO05D000593 1.4e-14 83.6 124 49.2
Lalb_Chr12g0204811 Lupinus albus HOM05D000336 ORTHO05D000593 1.8e-14 83.2 117 52.1
Eucgr.D00352 Eucalyptus grandis HOM05D000336 ORTHO05D000593 3.1e-14 82.4 124 51.6
Sabra11G0064100 Salix brachista HOM05D000336 ORTHO05D000593 3.1e-14 82.4 117 49.6
Oeu027772.1 Olea europaea HOM05D000336 ORTHO05D015325 9.1e-14 80.9 110 50.9
TWI73G1232 Tripterygium wilfordii HOM05D000336 ORTHO05D000593 1.2e-13 80.5 107 53.3
Hma1.2p1_0015F.1_g010470 Hydrangea macrophylla HOM05D000336 ORTHO05D000593 1.6e-13 80.1 124 48.4
Oeu001207.1 Olea europaea HOM05D000336 ORTHO05D000593 1.6e-13 80.1 143 43.4
Sed0008814 Sechium edule HOM05D000336 ORTHO05D000593 1.6e-13 80.1 116 52.6
Lalb_Chr18g0055071 Lupinus albus HOM05D000336 ORTHO05D000593 2.0e-13 79.7 127 47.2
CiPaw.10G098000 Carya illinoinensis HOM05D000336 ORTHO05D000593 2.6e-13 79.3 107 55.1
Duzib114G0007 Durio zibethinus HOM05D000336 ORTHO05D000593 3.5e-13 79.0 107 52.3
PGR031G1206 Punica granatum HOM05D000336 ORTHO05D000593 3.5e-13 79.0 122 49.2
Actinidia39543 Actinidia chinensis HOM05D000336 ORTHO05D000593 5.9e-13 78.2 105 55.2
Potri.001G355300 Populus trichocarpa HOM05D000336 ORTHO05D000593 7.7e-13 77.8 118 51.7
MSTRG.16194 Avicennia marina HOM05D000336 ORTHO05D000593 1.0e-12 77.4 107 52.3
Medtr2g018270 Medicago truncatula HOM05D000336 ORTHO05D000593 1.3e-12 77.0 130 46.9
Potri.011G077100 Populus trichocarpa HOM05D000336 ORTHO05D000593 1.3e-12 77.0 118 49.2
Gohir.A05G151900 Gossypium hirsutum HOM05D000336 ORTHO05D000593 1.7e-12 76.6 124 46.8
Oeu046830.1 Olea europaea HOM05D000336 ORTHO05D000593 1.7e-12 76.6 106 46.2
Gohir.D05G154300 Gossypium hirsutum HOM05D000336 ORTHO05D000593 2.9e-12 75.9 93 51.6
Gorai.009G158600 Gossypium raimondii HOM05D000336 ORTHO05D000593 3.8e-12 75.5 93 51.6
Ciclev10014673m.g Citrus clementina HOM05D000336 ORTHO05D000593 5.0e-12 75.1 91 53.8
Cc09_g09970 Coffea canephora HOM05D000336 ORTHO05D000593 6.5e-12 74.7 105 52.4
Lalb_Chr20g0117661 Lupinus albus HOM05D000336 ORTHO05D000593 6.5e-12 74.7 109 47.7
Sabra16G0233800 Salix brachista HOM05D000336 ORTHO05D000593 6.5e-12 74.7 118 49.2
SalBow8G5153 Salvia bowleyana HOM05D000336 ORTHO05D000593 1.1e-11 73.9 106 47.2
Cfa010551 Carpinus fangiana HOM05D000336 ORTHO05D000593 1.5e-11 73.6 106 51.9
Haze_03479 Corylus avellana HOM05D000336 ORTHO05D000593 1.5e-11 73.6 106 51.9
Duzib235G1112 Durio zibethinus HOM05D000336 ORTHO05D000593 1.9e-11 73.2 94 50.0
SalBow8G0784 Salvia bowleyana HOM05D000336 ORTHO05D000593 2.5e-11 72.8 104 47.1
Duzib160G0793 Durio zibethinus HOM05D000336 ORTHO05D000593 5.5e-11 71.6 81 56.8
CSS0024579 Camellia sinensis var. sinensis HOM05D000336 ORTHO05D000593 7.2e-11 71.2 125 47.2
Glyma.13G222500 Glycine max HOM05D000336 ORTHO05D000593 1.2e-10 70.5 122 45.9
Prupe.4G072500 Prunus persica HOM05D000336 ORTHO05D000593 1.2e-10 70.5 118 45.8
DCAR_007916 Daucus carota HOM05D000336 ORTHO05D000593 1.6e-10 70.1 115 47.8
Migut.M00969 Erythranthe guttata HOM05D000336 ORTHO05D000593 1.6e-10 70.1 116 48.3
Cpa.g.sc17.161 Carica papaya HOM05D000336 ORTHO05D000593 2.1e-10 69.7 90 53.3
TPR.G20632 Trifolium pratense HOM05D000336 ORTHO05D000593 3.6e-10 68.9 126 44.4
Lalb_Chr13g0295421 Lupinus albus HOM05D000336 ORTHO05D000593 6.1e-10 68.2 117 47.9
Atru.chr10.1457 Acer truncatum HOM05D000336 ORTHO05D000593 8.0e-10 67.8 79 51.9
DCAR_003954 Daucus carota HOM05D000336 ORTHO05D000593 1.0e-09 67.4 110 49.1
Rhsim02G0151700 Rhododendron simsii HOM05D000336 ORTHO05D000593 1.8e-09 66.6 125 41.6
TAR629G3391 Trochodendron aralioides HOM05D000336 ORTHO05D000593 1.8e-09 66.6 121 44.6
CsaV3_6G051270 Cucumis sativus L. HOM05D000336 ORTHO05D000593 2.3e-09 66.2 116 44.8
Oeu035034.1 Olea europaea HOM05D000336 ORTHO05D000593 2.3e-09 66.2 127 41.7
Dinv01258 Davidia involucrata HOM05D000336 ORTHO05D000593 6.7e-09 64.7 122 45.9
Aqoxy1G03221 Aquilegia oxysepala HOM05D017237 ORTHO05D015325 8.8e-09 64.3 78 56.4
Zm00001eb156390 Zea mays HOM05D009386 ORTHO05D011419 1.2e-08 63.9 125 44.8
MELO3C007177.2 Cucumis melo HOM05D000336 ORTHO05D000593 1.5e-08 63.5 115 44.3
Phvul.006G168500 Phaseolus vulgaris HOM05D000336 ORTHO05D000593 1.5e-08 63.5 121 43.0
Glyma.15G089700 Glycine max HOM05D000336 ORTHO05D000593 2.0e-08 63.2 122 43.4
Hma1.2p1_0015F.1_g010490 Hydrangea macrophylla HOM05D000336 ORTHO05D000593 2.0e-08 63.2 125 43.2
arahy.Tifrunner.gnm1.ann1.73019P Arachis hypogaea HOM05D000336 ORTHO05D000593 3.3e-08 62.4 121 43.8
arahy.Tifrunner.gnm1.ann1.973ZBX Arachis hypogaea HOM05D000336 ORTHO05D000593 3.3e-08 62.4 121 43.8
Hma1.2p1_0015F.1_g010540 Hydrangea macrophylla HOM05D000336 ORTHO05D000593 4.4e-08 62.0 125 43.2
Aqoxy4G03222 Aquilegia oxysepala HOM05D000336 ORTHO05D000593 5.7e-08 61.6 96 50.0
Aqoxy4G00167 Aquilegia oxysepala HOM05D000336 ORTHO05D000593 9.7e-08 60.8 95 49.5
Lj6g0004648 Lotus japonicus HOM05D000336 ORTHO05D000593 1.7e-07 60.1 119 42.0
VMungo0540G0396 Vigna mungo HOM05D000336 ORTHO05D000593 1.7e-07 60.1 121 40.5
AUR62035822 Chenopodium quinoa HOM05D000336 ORTHO05D000593 2.2e-07 59.7 121 37.2
Oeu063203.1 Olea europaea HOM05D000336 ORTHO05D015325 2.2e-07 59.7 91 51.6
Gohir.D10G033100 Gossypium hirsutum HOM05D000336 ORTHO05D000593 4.8e-07 58.5 128 39.8
Gohir.A10G032300 Gossypium hirsutum HOM05D000336 ORTHO05D000593 8.2e-07 57.8 128 39.1
MD10G1268800 Malus domestica HOM05D000336 ORTHO05D000593 8.2e-07 57.8 118 41.5
Thecc.06G159500 Theobroma cacao HOM05D000336 ORTHO05D000593 8.2e-07 57.8 79 51.9
MD05G1292900 Malus domestica HOM05D000336 ORTHO05D000593 1.4e-06 57.0 120 41.7
RcHm_v2.0_Chr5g0012791 Rosa chinensis HOM05D000336 ORTHO05D000593 1.4e-06 57.0 103 44.7
Hund17848 Selenicereus undatus HOM05D000336 ORTHO05D000593 2.4e-06 56.2 124 41.1
Zm00001eb173380 Zea mays HOM05D000336 ORTHO05D002301 4.1e-06 55.5 120 43.3
FAN06G0798 Fragaria x ananassa HOM05D017237 ORTHO05D015325 5.3e-06 55.1 79 48.1
FAN06G1615 Fragaria x ananassa HOM05D017237 ORTHO05D015325 7.0e-06 54.7 82 47.6
FAN06G5056 Fragaria x ananassa HOM05D017237 ORTHO05D015325 7.0e-06 54.7 82 47.6
FvH4_7g09881 Fragaria vesca HOM05D017237 ORTHO05D015325 9.1e-06 54.3 82 47.6


User provided reference genes

Program Settings