Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p080818 Quercus lobata HOM05D000678 ORTHO05D007637 3.1e-53 211.5 103 100.0
QL05p080866 Quercus lobata HOM05D000678 ORTHO05D007637 9.5e-26 120.2 88 69.3
Hma1.2p1_1515F.1_g288190 Hydrangea macrophylla HOM05D000678 ORTHO05D007637 2.5e-10 68.9 84 47.6
FAN21G1949 Fragaria x ananassa HOM05D000678 ORTHO05D007637 3.3e-10 68.6 84 48.8
FAN25G0180 Fragaria x ananassa HOM05D000678 ORTHO05D007637 3.3e-10 68.6 83 45.8
CSS0013225 Camellia sinensis var. sinensis HOM05D000678 ORTHO05D007637 5.6e-10 67.8 81 48.1
CSS0047061 Camellia sinensis var. sinensis HOM05D000678 ORTHO05D007637 5.6e-10 67.8 81 48.1
Dinv40465 Davidia involucrata HOM05D000678 ORTHO05D007637 9.6e-10 67.0 85 45.9
Gohir.D05G169500 Gossypium hirsutum HOM05D000678 ORTHO05D007637 1.6e-09 66.2 84 44.0
Gohir.A05G166500 Gossypium hirsutum HOM05D000678 ORTHO05D007637 2.8e-09 65.5 84 44.0
Prupe.4G034500 Prunus persica HOM05D000678 ORTHO05D007637 3.6e-09 65.1 82 47.6
Sabra11G0027900 Salix brachista HOM05D000678 ORTHO05D007637 6.2e-09 64.3 85 41.2
FvH4_3g03730 Fragaria vesca HOM05D000678 ORTHO05D007637 1.1e-08 63.5 84 48.8
FAN11G0235 Fragaria x ananassa HOM05D000678 ORTHO05D007637 1.1e-08 63.5 84 48.8
Manes.17G034100 Manihot esculenta HOM05D000678 ORTHO05D007637 1.4e-08 63.2 85 40.0
Phvul.002G220700 Phaseolus vulgaris HOM05D000678 ORTHO05D007637 2.4e-08 62.4 88 39.8
Ciclev10015301m.g Citrus clementina HOM05D000678 ORTHO05D007637 3.1e-08 62.0 87 44.8
Sabra04G0018400 Salix brachista HOM05D000678 ORTHO05D007637 3.1e-08 62.0 80 46.2
COL.COLO4_31629 Corchorus olitorius HOM05D000678 ORTHO05D007637 4.0e-08 61.6 85 43.5
MD10G1305100 Malus domestica HOM05D000678 ORTHO05D007637 4.0e-08 61.6 85 44.7
TAR626G0669 Trochodendron aralioides HOM05D000678 ORTHO05D007637 5.3e-08 61.2 92 41.3
TAR627G1079 Trochodendron aralioides HOM05D000678 ORTHO05D007637 5.3e-08 61.2 83 43.4
TWI38G0501 Tripterygium wilfordii HOM05D000678 ORTHO05D007637 6.9e-08 60.8 85 41.2
Nn1g03837 Nelumbo nucifera HOM05D000678 ORTHO05D007637 9.0e-08 60.5 84 41.7
Potri.004G032200 Populus trichocarpa HOM05D000678 ORTHO05D007637 9.0e-08 60.5 80 43.8
Actinidia05564 Actinidia chinensis HOM05D000678 ORTHO05D007637 1.5e-07 59.7 83 42.2
Rhsim13G0168900 Rhododendron simsii HOM05D000678 ORTHO05D007637 1.5e-07 59.7 76 47.4
arahy.Tifrunner.gnm1.ann1.15NCRR Arachis hypogaea HOM05D000678 ORTHO05D007637 2.0e-07 59.3 88 43.2
CsaV3_6G049580 Cucumis sativus L. HOM05D000678 ORTHO05D007637 2.6e-07 58.9 83 41.0
FAN16G2688 Fragaria x ananassa HOM05D000678 ORTHO05D007637 2.6e-07 58.9 84 46.4
MD05G1327000 Malus domestica HOM05D000678 ORTHO05D007637 2.6e-07 58.9 85 41.2
Duzib235G1172 Durio zibethinus HOM05D000678 ORTHO05D007637 3.4e-07 58.5 76 46.1
Gohir.D06G127300 Gossypium hirsutum HOM05D000678 ORTHO05D007637 4.5e-07 58.2 82 43.9
Thecc.06G202100 Theobroma cacao HOM05D000678 ORTHO05D007637 4.5e-07 58.2 74 45.9
Rhsim02G0118800 Rhododendron simsii HOM05D000678 ORTHO05D007637 5.8e-07 57.8 84 40.5
Gorai.010G148800 Gossypium raimondii HOM05D000678 ORTHO05D007637 1.3e-06 56.6 82 42.7
arahy.Tifrunner.gnm1.ann1.VDG15V Arachis hypogaea HOM05D000678 ORTHO05D007637 1.7e-06 56.2 88 42.0
Gohir.A06G114900 Gossypium hirsutum HOM05D000678 ORTHO05D007637 1.7e-06 56.2 80 42.5
Gohir.A06G132102 Gossypium hirsutum HOM05D000678 ORTHO05D007637 1.7e-06 56.2 80 42.5
Lalb_Chr16g0383361 Lupinus albus HOM05D000678 ORTHO05D007637 2.9e-06 55.5 85 43.5
PGR004G1075 Punica granatum HOM05D000678 ORTHO05D007637 2.9e-06 55.5 87 37.9
PSO541G6463 Papaver somniferum HOM05D000678 ORTHO05D007637 3.8e-06 55.1 78 43.6


User provided reference genes

Program Settings