Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p077196 Quercus lobata HOM05D006759 ORTHO05D008633 5.3e-167 590.9 286 100.0
QL93p0073_1304 Quercus lobata HOM05D006759 ORTHO05D008633 2.0e-166 589.0 286 99.7
Cfa016405 Carpinus fangiana HOM05D006759 ORTHO05D008633 5.3e-151 537.7 285 89.1
Haze_06682 Corylus avellana HOM05D006759 ORTHO05D008633 2.2e-149 532.3 286 88.5
MD10G1311200 Malus domestica HOM05D006759 ORTHO05D008633 7.2e-148 527.3 286 88.5
CSS0000245 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 2.7e-147 525.4 286 87.4
CSS0002106 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 4.7e-147 524.6 286 87.4
CiPaw.09G080000 Carya illinoinensis HOM05D006759 ORTHO05D008633 4.7e-147 524.6 286 86.7
CANSAT56G4156 Cannabis sativa HOM05D006759 ORTHO05D008633 6.1e-147 524.2 286 84.3
PGR004G2806 Punica granatum HOM05D006759 ORTHO05D008633 2.2e-144 515.8 285 85.3
MELO3C002513.2 Cucumis melo HOM05D006759 ORTHO05D008633 4.8e-144 514.6 284 84.9
Duzib160G0398 Durio zibethinus HOM05D006759 ORTHO05D008633 4.8e-144 514.6 282 87.2
Rhsim02G0115500 Rhododendron simsii HOM05D006759 ORTHO05D008633 8.2e-144 513.8 285 85.3
Gohir.A10G017000 Gossypium hirsutum HOM05D006759 ORTHO05D008633 1.8e-143 512.7 282 85.5
Gorai.011G019000 Gossypium raimondii HOM05D006759 ORTHO05D008633 1.8e-143 512.7 282 85.1
vmacro15843 Vaccinium macrocarpon HOM05D006759 ORTHO05D008633 1.8e-143 512.7 286 84.3
TWI38G2336 Tripterygium wilfordii HOM05D006759 ORTHO05D008633 4.1e-143 511.5 281 84.7
CsaV3_1G011360 Cucumis sativus L. HOM05D006759 ORTHO05D008633 9.1e-143 510.4 284 84.2
ClCG03G005150 Citrullus lanatus HOM05D006759 ORTHO05D008633 3.5e-142 508.4 298 81.9
Gohir.D10G017100 Gossypium hirsutum HOM05D006759 ORTHO05D008633 4.5e-142 508.1 282 84.8
COL.COLO4_31683 Corchorus olitorius HOM05D006759 ORTHO05D008633 1.7e-141 506.1 282 83.7
Dinv17853 Davidia involucrata HOM05D006759 ORTHO05D008633 3.8e-141 505.0 272 87.1
RcHm_v2.0_Chr5g0004601 Rosa chinensis HOM05D006759 ORTHO05D008633 3.8e-141 505.0 285 84.6
Atru.chr10.2043 Acer truncatum HOM05D006759 ORTHO05D008633 1.5e-140 503.1 282 84.4
Lalb_Chr05g0218011 Lupinus albus HOM05D006759 ORTHO05D008633 4.2e-140 501.5 286 80.4
Thecc.06G208000 Theobroma cacao HOM05D006759 ORTHO05D008633 4.2e-140 501.5 282 83.7
Eucgr.D00856 Eucalyptus grandis HOM05D006759 ORTHO05D008633 5.5e-140 501.1 286 81.1
Prupe.4G029700 Prunus persica HOM05D006759 ORTHO05D008633 2.7e-139 498.8 271 87.5
Cpa.g.sc81.5 Carica papaya HOM05D006759 ORTHO05D008633 4.7e-139 498.0 281 84.3
FvH4_3g02960 Fragaria vesca HOM05D006759 ORTHO05D008633 4.7e-139 498.0 285 82.8
FAN21G1217 Fragaria x ananassa HOM05D006759 ORTHO05D008633 6.8e-138 494.2 285 82.5
FAN21G3610 Fragaria x ananassa HOM05D006759 ORTHO05D008633 6.8e-138 494.2 285 82.5
FAN25G0528 Fragaria x ananassa HOM05D006759 ORTHO05D008633 1.2e-137 493.4 285 82.1
THA.LOC104812582 Tarenaya hassleriana HOM05D006759 ORTHO05D008633 1.2e-137 493.4 286 81.5
Potri.011G031600 Populus trichocarpa HOM05D006759 ORTHO05D008633 3.4e-137 491.9 283 81.6
MSTRG.15955 Avicennia marina HOM05D006759 ORTHO05D008633 4.4e-137 491.5 286 79.0
Ciclev10016144m.g Citrus clementina HOM05D006759 ORTHO05D008633 4.4e-137 491.5 281 82.9
Medtr4g092110 Medicago truncatula HOM05D006759 ORTHO05D008633 7.5e-137 490.7 286 79.7
CARHR227890 Cardamine hirsuta HOM05D006759 ORTHO05D008633 9.8e-137 490.3 282 80.9
AL7G32800 Arabidopsis lyrata HOM05D006759 ORTHO05D008633 2.2e-136 489.2 282 81.2
Carub.0007s2012 Capsella rubella HOM05D006759 ORTHO05D008633 3.7e-136 488.4 282 81.6
AT4G21320 Arabidopsis thaliana HOM05D006759 ORTHO05D008633 4.8e-136 488.0 282 81.2
Aa31LG6G3340 Aethionema arabicum HOM05D006759 ORTHO05D008633 6.3e-136 487.6 282 81.9
Thhalv10025914m.g Eutrema salsugineum HOM05D006759 ORTHO05D008633 6.3e-136 487.6 281 81.5
SGA_v2.0_scaffold7G03895 Striga asiatica HOM05D006759 ORTHO05D008633 2.4e-135 485.7 286 77.3
Ca_18449_v3 Cicer arietinum L. HOM05D006759 ORTHO05D008633 3.1e-135 485.3 286 78.3
Cc02_g11810 Coffea canephora HOM05D006759 ORTHO05D008633 3.1e-135 485.3 293 77.1
Psat7g105480 Pisum sativum HOM05D006759 ORTHO05D008633 3.1e-135 485.3 286 78.7
Lj4g0006967 Lotus japonicus HOM05D006759 ORTHO05D008633 4.1e-135 485.0 285 77.9
Sabra11G0019100 Salix brachista HOM05D006759 ORTHO05D008633 4.1e-135 485.0 283 81.3
A03p52720 Brassica napus HOM05D006759 ORTHO05D008633 2.0e-134 482.6 283 80.2
Sabra11G0024900 Salix brachista HOM05D006759 ORTHO05D008633 2.0e-134 482.6 283 81.6
Migut.M01261 Erythranthe guttata HOM05D006759 ORTHO05D008633 3.5e-134 481.9 285 77.9
Oeu058167.4 Olea europaea HOM05D006759 ORTHO05D008633 3.5e-134 481.9 309 74.4
arahy.Tifrunner.gnm1.ann1.13LU1X Arachis hypogaea HOM05D006759 ORTHO05D008633 4.5e-134 481.5 287 79.1
BolC7t45615H Brassica oleracea HOM05D006759 ORTHO05D008633 7.7e-134 480.7 283 79.5
TAR626G1069 Trochodendron aralioides HOM05D006759 ORTHO05D008633 1.3e-133 479.9 285 81.1
arahy.Tifrunner.gnm1.ann1.6345FV Arachis hypogaea HOM05D006759 ORTHO05D008633 1.7e-133 479.6 286 79.0
SalBow8G2756 Salvia bowleyana HOM05D006759 ORTHO05D008633 3.8e-133 478.4 286 76.6
BcaC06g30660 Brassica carinata HOM05D006759 ORTHO05D008633 1.1e-132 476.9 283 79.9
Sp7g19390 Schrenkiella parvula HOM05D006759 ORTHO05D008633 1.1e-132 476.9 283 78.8
Nn1g03732 Nelumbo nucifera HOM05D006759 ORTHO05D008633 1.5e-132 476.5 285 79.3
Manes.16G016600 Manihot esculenta HOM05D006759 ORTHO05D008633 5.5e-132 474.6 279 81.7
Nitab4.5_0002345g0080 Nicotiana tabacum HOM05D006759 ORTHO05D008633 7.2e-132 474.2 286 75.5
Glyma.08G062300 Glycine max HOM05D006759 ORTHO05D008633 9.4e-132 473.8 286 77.3
Nitab4.5_0006475g0040 Nicotiana tabacum HOM05D006759 ORTHO05D008633 1.2e-131 473.4 286 74.8
Sc05g0008410 Simmondsia chinensis HOM05D006759 ORTHO05D008633 1.2e-131 473.4 283 76.3
PSO170G0831 Papaver somniferum HOM05D006759 ORTHO05D008633 1.4e-130 469.9 288 76.4
Peaxi162Scf00082g01114 Petunia axillaris HOM05D006759 ORTHO05D008633 6.8e-130 467.6 277 76.9
Lsat_1_v5_gn_7_18360 Lactuca sativa HOM05D006759 ORTHO05D008633 1.2e-129 466.8 286 75.9
HanXRQChr05g0130811 Helianthus annuus HOM05D006759 ORTHO05D008633 1.5e-129 466.5 286 77.6
MBI02_g02472_MAGBIO Magnolia biondii HOM05D006759 ORTHO05D008633 4.4e-129 464.9 323 70.6
CAN.G424.100 Capsicum annuum HOM05D006759 ORTHO05D008633 5.7e-129 464.5 285 72.6
AUR62014623 Chenopodium quinoa HOM05D006759 ORTHO05D008633 2.2e-128 462.6 282 74.1
PGSC0003DMG400021726 Solanum tuberosum HOM05D006759 ORTHO05D008633 6.3e-128 461.1 285 72.3
TPR.G13912 Trifolium pratense HOM05D006759 ORTHO05D008633 1.1e-127 460.3 287 75.3
BraA03t14346Z Brassica rapa HOM05D006759 ORTHO05D008633 1.8e-127 459.5 268 80.2
ECA236G1815 Erigeron canadensis HOM05D006759 ORTHO05D008633 2.4e-127 459.1 282 76.2
AUR62012578 Chenopodium quinoa HOM05D006759 ORTHO05D008633 3.1e-127 458.8 282 73.8
BcaNung00862 Brassica carinata HOM05D006759 ORTHO05D008633 1.2e-126 456.8 268 79.5
C07p51160 Brassica napus HOM05D006759 ORTHO05D008633 1.2e-126 456.8 268 79.5
Sopen02g024680 Solanum pennellii HOM05D006759 ORTHO05D008633 4.5e-126 454.9 285 71.9
Ah.14g088500 Amaranthus hybridus HOM05D006759 ORTHO05D008633 1.3e-125 453.4 277 75.1
Solyc02g079930.3 Solanum lycopersicum HOM05D006759 ORTHO05D008633 1.9e-124 449.5 285 71.2
EL10As6g23697 Beta vulgaris HOM05D006759 ORTHO05D008633 1.2e-123 446.8 282 73.4
Sed0013464 Sechium edule HOM05D006759 ORTHO05D008633 2.3e-122 442.6 246 85.8
ATR0073G021 Amborella trichopoda HOM05D006759 ORTHO05D008633 1.7e-120 436.4 268 75.0
CDE05G1382 Ceratophyllum demersum HOM05D006759 ORTHO05D008633 6.4e-120 434.5 285 69.5
DCAR_028150 Daucus carota HOM05D006759 ORTHO05D008633 4.6e-118 428.3 268 72.4
unitig_37.g12139 Utricularia gibba HOM05D006759 ORTHO05D008633 5.0e-117 424.9 283 67.8
Hund21315 Selenicereus undatus HOM05D006759 ORTHO05D008633 1.8e-114 416.4 262 72.9
Os06g0682900 Oryza sativa ssp. japonica HOM05D006759 ORTHO05D008633 1.3e-112 410.2 278 70.1
Phvul.002G218300 Phaseolus vulgaris HOM05D006759 ORTHO05D008633 1.7e-112 409.8 283 68.2
Zm00001eb225360 Zea mays HOM05D006759 ORTHO05D008633 1.9e-111 406.4 278 69.8
HPP92_027153 Vanilla planifolia HOM05D006759 ORTHO05D008633 3.9e-109 398.7 246 74.4
VMungo0251G0437 Vigna mungo HOM05D006759 ORTHO05D008633 3.9e-109 398.7 285 66.7
Lj1C1222T1 Lonicera japonica HOM05D006759 ORTHO05D008633 1.5e-105 386.7 239 77.4
GSVIVG01004352001 Vitis vinifera HOM05D006759 ORTHO05D008633 2.6e-105 386.0 212 85.4
SEGI_30514 Sequoiadendron giganteum HOM05D006759 ORTHO05D008633 1.2e-89 334.0 263 59.7
Actinidia36908 Actinidia chinensis HOM05D006759 ORTHO05D008633 3.6e-83 312.4 175 82.3
AagrBONN_evm.TU.Sc2ySwM_117.529 Anthoceros agrestis HOM05D006759 ORTHO05D008633 8.7e-77 291.2 260 50.0
Mapoly0122s0010 Marchantia polymorpha HOM05D006759 ORTHO05D008633 1.3e-72 277.3 259 51.0
Pp3c22_820 Physcomitrium patens HOM05D006759 ORTHO05D008633 3.8e-72 275.8 253 50.6
Pp3c18_19780 Physcomitrium patens HOM05D006759 ORTHO05D008633 7.1e-71 271.6 261 49.0
Nn2g12529 Nelumbo nucifera HOM05D006759 ORTHO05D008633 5.3e-58 228.8 152 73.0
GSVIVG01002901001 Vitis vinifera HOM05D006759 ORTHO05D008633 3.7e-51 206.1 109 90.8
SMO327G0040 Selaginella moellendorffii HOM05D006759 ORTHO05D008633 7.9e-46 188.3 253 39.5
CANSAT21G1109 Cannabis sativa HOM05D006759 ORTHO05D008633 5.7e-44 182.2 105 79.0
Potri.004G031100 Populus trichocarpa HOM05D006759 ORTHO05D008633 1.3e-43 181.0 193 50.8
Hund21313 Selenicereus undatus HOM05D006759 ORTHO05D008633 1.8e-42 177.2 303 39.6
RcHm_v2.0_Chr5g0004571 Rosa chinensis HOM05D006759 ORTHO05D008633 5.3e-42 175.6 163 58.9
Nn7g36203 Nelumbo nucifera HOM05D006759 ORTHO05D008633 3.3e-36 156.4 95 75.8
Glyma.07G186901 Glycine max HOM05D006759 ORTHO05D008633 4.8e-35 152.5 94 72.3
Aqoxy1G03825 Aquilegia oxysepala HOM05D006759 ORTHO05D008633 2.4e-34 150.2 88 78.4
GSVIVG01004471001 Vitis vinifera HOM05D006759 ORTHO05D008633 1.1e-31 141.4 76 86.8
COL.COLO4_11824 Corchorus olitorius HOM05D000068 ORTHO05D000084 4.2e-23 112.8 67 77.6
COL.COLO4_37489 Corchorus olitorius HOM05D006759 ORTHO05D161314 4.2e-23 112.8 66 78.8
Hund21314 Selenicereus undatus HOM05D006759 ORTHO05D381616 7.0e-10 68.9 41 68.3
Nn1g06940 Nelumbo nucifera HOM05D006759 ORTHO05D008633 1.6e-06 57.8 48 62.5


User provided reference genes

Program Settings