Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p074160 Quercus lobata HOM05D001729 ORTHO05D001155 1.6e-128 462.6 211 100.0
QL05p074178 Quercus lobata HOM05D001729 ORTHO05D001155 2.8e-72 275.8 174 76.4
QL05p074214 Quercus lobata HOM05D001729 ORTHO05D001155 1.1e-60 237.3 271 49.8
QL05p012589 Quercus lobata HOM05D001729 ORTHO05D001155 7.7e-38 161.4 250 39.2
QL05p074174 Quercus lobata HOM05D001729 ORTHO05D001155 5.1e-34 148.7 284 38.4
QL05p052800 Quercus lobata HOM05D001729 ORTHO05D001155 5.3e-31 138.7 291 32.3
QL05p065010 Quercus lobata HOM05D001729 ORTHO05D001155 1.0e-29 134.4 283 32.9
QL05p012608 Quercus lobata HOM05D001729 ORTHO05D001155 7.2e-28 128.3 283 33.2
QL05p014501 Quercus lobata HOM05D001729 ORTHO05D001155 1.1e-25 120.9 274 30.3
QL05p012667 Quercus lobata HOM05D001729 ORTHO05D001155 1.3e-21 107.5 266 31.6
QL05p074156 Quercus lobata HOM05D001729 ORTHO05D001155 6.3e-16 88.6 185 37.3
FvH4_2g24261 Fragaria vesca HOM05D001729 ORTHO05D001155 1.1e-15 87.8 276 27.9
RcHm_v2.0_Chr6g0292271 Rosa chinensis HOM05D001729 ORTHO05D001155 2.4e-15 86.7 281 26.7
FAN14G5781 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.5e-12 76.6 254 26.8
HanXRQChr15g0474391 Helianthus annuus HOM05D008898 ORTHO05D001155 2.1e-11 73.6 266 27.8
FAN02G2750 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.7e-11 73.2 231 27.3
RcHm_v2.0_Chr7g0221261 Rosa chinensis HOM05D001729 ORTHO05D001155 3.6e-11 72.8 299 27.4
TAR625G1137 Trochodendron aralioides HOM05D001729 ORTHO05D001155 8.0e-11 71.6 245 27.8
FAN14G3624 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.0e-10 69.7 231 26.8
Migut.L01260 Erythranthe guttata HOM05D001729 ORTHO05D001155 5.2e-10 68.9 240 26.2
QL01p006048 Quercus lobata HOM05D001729 ORTHO05D001155 5.2e-10 68.9 64 53.1
QL05p012650 Quercus lobata HOM05D001729 ORTHO05D001155 6.8e-10 68.6 157 35.0
QL05p074143 Quercus lobata HOM05D000981 ORTHO05D001155 6.8e-10 68.6 95 47.4
FAN14G3807 Fragaria x ananassa HOM05D001729 ORTHO05D001155 8.8e-10 68.2 317 24.0
QL07p036110 Quercus lobata HOM05D001729 ORTHO05D001155 8.8e-10 68.2 116 37.1
FvH4_6g03380 Fragaria vesca HOM05D001729 ORTHO05D001155 1.2e-09 67.8 231 26.8
Dinv35017 Davidia involucrata HOM05D008898 ORTHO05D001155 1.5e-09 67.4 268 25.4
PSO210G1832 Papaver somniferum HOM05D008326 ORTHO05D001155 1.5e-09 67.4 271 25.8
AUR62006002 Chenopodium quinoa HOM05D001729 ORTHO05D001155 2.0e-09 67.0 286 25.2
HanXRQChr15g0474341 Helianthus annuus HOM05D008898 ORTHO05D001155 2.6e-09 66.6 277 25.3
CSS0028413 Camellia sinensis var. sinensis HOM05D008898 ORTHO05D001155 4.4e-09 65.9 276 25.4
HanXRQChr01g0029461 Helianthus annuus HOM05D008898 ORTHO05D001155 4.4e-09 65.9 267 24.7
QL05p008000 Quercus lobata HOM05D001729 ORTHO05D001155 4.4e-09 65.9 308 23.7
QL05p009518 Quercus lobata HOM05D001729 ORTHO05D001155 4.4e-09 65.9 262 26.7
QL07p019801 Quercus lobata HOM05D001729 ORTHO05D001155 5.7e-09 65.5 298 25.2
Sabra15G0014700 Salix brachista HOM05D001729 ORTHO05D001155 5.7e-09 65.5 254 26.4
CSS0020895 Camellia sinensis var. sinensis HOM05D008898 ORTHO05D001155 9.8e-09 64.7 276 25.0
RcHm_v2.0_Chr6g0292091 Rosa chinensis HOM05D001729 ORTHO05D001155 9.8e-09 64.7 275 24.4
QL02p054283 Quercus lobata HOM05D001729 ORTHO05D001155 2.2e-08 63.5 153 32.0
FAN05G5452 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.8e-08 63.2 231 26.0
Duzib170G0599 Durio zibethinus HOM05D001729 ORTHO05D001155 8.3e-08 61.6 62 48.4
Gohir.A09G096401 Gossypium hirsutum HOM05D001729 ORTHO05D001155 8.3e-08 61.6 60 51.7
Gohir.D09G096101 Gossypium hirsutum HOM05D001729 ORTHO05D001155 8.3e-08 61.6 60 51.7
Lalb_Chr04g0264551 Lupinus albus HOM05D012242 ORTHO05D001155 8.3e-08 61.6 246 23.6
Dinv42745 Davidia involucrata HOM05D000007 ORTHO05D000039 1.1e-07 61.2 191 26.7
Dinv43356 Davidia involucrata HOM05D000007 ORTHO05D000039 1.1e-07 61.2 191 26.7
FAN14G0866 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.1e-07 61.2 119 35.3
MD15G1018100 Malus domestica HOM05D001729 ORTHO05D001155 1.1e-07 61.2 112 33.9
PSO384G0370 Papaver somniferum HOM05D001729 ORTHO05D001155 1.1e-07 61.2 194 24.2
RcHm_v2.0_Chr6g0291931 Rosa chinensis HOM05D001729 ORTHO05D001155 2.4e-07 60.1 99 32.3
FAN20G2561 Fragaria x ananassa HOM05D000205 ORTHO05D000438 3.1e-07 59.7 221 25.3
Gorai.006G112800 Gossypium raimondii HOM05D001729 ORTHO05D001155 3.1e-07 59.7 60 50.0
Lsat_1_v5_gn_5_31100 Lactuca sativa HOM05D001729 ORTHO05D001155 3.1e-07 59.7 88 40.9
Sabra01G0178200 Salix brachista HOM05D000664 ORTHO05D000491 5.4e-07 58.9 129 35.7
Sc19g0001870 Simmondsia chinensis HOM05D001729 ORTHO05D001155 5.4e-07 58.9 140 28.6
CiPaw.15G154900 Carya illinoinensis HOM05D000664 ORTHO05D000491 7.0e-07 58.5 133 33.1
HanXRQChr17g0547181 Helianthus annuus HOM05D008898 ORTHO05D001155 7.0e-07 58.5 259 25.1
ECA232G3527 Erigeron canadensis HOM05D000664 ORTHO05D000491 9.1e-07 58.2 201 28.4
FvH4_6g46241 Fragaria vesca HOM05D001729 ORTHO05D001155 9.1e-07 58.2 315 24.4
HanXRQChr04g0121411 Helianthus annuus HOM05D001729 ORTHO05D001155 1.6e-06 57.4 59 49.2
QL07p036320 Quercus lobata HOM05D001729 ORTHO05D001155 1.6e-06 57.4 64 42.2
Migut.G00030 Erythranthe guttata HOM05D007162 ORTHO05D007631 2.0e-06 57.0 128 32.8
QL07p036300 Quercus lobata HOM05D001729 ORTHO05D001155 2.0e-06 57.0 64 42.2
Rhsim08G0220200 Rhododendron simsii HOM05D001729 ORTHO05D001155 2.0e-06 57.0 62 41.9
SGA_v2.0_scaffold60G20808 Striga asiatica HOM05D000664 ORTHO05D000491 2.0e-06 57.0 185 29.2
COL.COLO4_34020 Corchorus olitorius HOM05D001729 ORTHO05D001155 2.7e-06 56.6 64 46.9
Duzib177G1102 Durio zibethinus HOM05D000664 ORTHO05D000491 2.7e-06 56.6 152 30.9
RcHm_v2.0_Chr3g0450211 Rosa chinensis HOM05D001729 ORTHO05D001155 2.7e-06 56.6 63 42.9
Hund23305 Selenicereus undatus HOM05D001340 ORTHO05D011069 3.5e-06 56.2 46 50.0
Haze_13295 Corylus avellana HOM05D000007 ORTHO05D000039 4.5e-06 55.8 80 36.2
Dinv34857 Davidia involucrata HOM05D001729 ORTHO05D001155 4.5e-06 55.8 194 24.7
FAN09G2508 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.5e-06 55.8 63 46.0
RcHm_v2.0_Chr2g0163051 Rosa chinensis HOM05D001729 ORTHO05D001155 4.5e-06 55.8 46 47.8
CAN.G1339.20 Capsicum annuum HOM05D000007 ORTHO05D000039 5.9e-06 55.5 80 35.0
FAN05G3901 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.9e-06 55.5 63 47.6
Lsat_1_v5_gn_6_92061 Lactuca sativa HOM05D001729 ORTHO05D001155 5.9e-06 55.5 59 50.8
Prupe.3G265100 Prunus persica HOM05D001729 ORTHO05D001155 5.9e-06 55.5 75 40.0
Thecc.09G280100 Theobroma cacao HOM05D008898 ORTHO05D036882 5.9e-06 55.5 59 47.5
Cfa020730 Carpinus fangiana HOM05D000664 ORTHO05D000491 7.7e-06 55.1 133 32.3
COL.COLO4_31760 Corchorus olitorius HOM05D000664 ORTHO05D000491 7.7e-06 55.1 274 23.7


User provided reference genes

Program Settings