Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p074156 Quercus lobata HOM05D001729 ORTHO05D001155 3.0e-201 704.9 336 100.0
QL05p074174 Quercus lobata HOM05D001729 ORTHO05D001155 5.2e-198 694.1 336 98.5
QL05p074143 Quercus lobata HOM05D000981 ORTHO05D001155 9.2e-70 268.1 226 58.8
QL05p074214 Quercus lobata HOM05D001729 ORTHO05D001155 1.6e-58 230.7 357 42.3
QL05p052800 Quercus lobata HOM05D001729 ORTHO05D001155 6.5e-47 192.2 382 36.6
QL05p014501 Quercus lobata HOM05D001729 ORTHO05D001155 1.9e-46 190.7 363 38.0
QL05p065010 Quercus lobata HOM05D001729 ORTHO05D001155 9.3e-46 188.3 356 36.2
QL02p054283 Quercus lobata HOM05D001729 ORTHO05D001155 1.3e-36 157.9 323 36.5
QL05p012608 Quercus lobata HOM05D001729 ORTHO05D001155 8.7e-36 155.2 343 33.5
QL05p012589 Quercus lobata HOM05D001729 ORTHO05D001155 1.1e-35 154.8 348 31.9
QL05p012667 Quercus lobata HOM05D001729 ORTHO05D001155 7.4e-35 152.1 343 33.2
MD14G1026900 Malus domestica HOM05D001729 ORTHO05D001155 2.2e-26 124.0 324 29.3
QL07p036300 Quercus lobata HOM05D001729 ORTHO05D001155 2.4e-25 120.6 333 31.8
TAR625G1137 Trochodendron aralioides HOM05D001729 ORTHO05D001155 6.9e-25 119.0 320 29.7
QL05p074178 Quercus lobata HOM05D001729 ORTHO05D001155 1.2e-24 118.2 187 40.6
QL07p036320 Quercus lobata HOM05D001729 ORTHO05D001155 1.2e-24 118.2 331 32.0
FAN02G0048 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.9e-23 113.6 340 27.9
FAN14G5781 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.1e-22 111.7 363 26.7
AUR62006002 Chenopodium quinoa HOM05D001729 ORTHO05D001155 1.9e-22 110.9 339 28.3
FAN14G0866 Fragaria x ananassa HOM05D001729 ORTHO05D001155 7.2e-22 109.0 339 27.4
AUR62035624 Chenopodium quinoa HOM05D001729 ORTHO05D001155 1.2e-21 108.2 339 28.0
RcHm_v2.0_Chr3g0449911 Rosa chinensis HOM05D001729 ORTHO05D001155 2.1e-21 107.5 336 28.0
Thecc.03G222100 Theobroma cacao HOM05D001729 ORTHO05D001155 2.1e-21 107.5 333 27.9
AUR62006003 Chenopodium quinoa HOM05D001729 ORTHO05D001155 1.0e-20 105.1 316 28.5
AUR62035623 Chenopodium quinoa HOM05D001729 ORTHO05D001155 1.0e-20 105.1 315 27.6
QL01p006048 Quercus lobata HOM05D001729 ORTHO05D001155 5.1e-20 102.8 356 28.1
QL07p036134 Quercus lobata HOM05D001729 ORTHO05D001155 8.8e-20 102.1 308 29.9
FvH4_6g01541 Fragaria vesca HOM05D001729 ORTHO05D001155 2.0e-19 100.9 350 25.4
QL05p008973 Quercus lobata HOM05D002270 ORTHO05D001155 4.4e-19 99.8 172 37.8
FAN14G3807 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.3e-18 98.2 338 26.0
Sabra11G0003700 Salix brachista HOM05D001729 ORTHO05D001155 2.8e-18 97.1 351 25.4
Potri.011G000700 Populus trichocarpa HOM05D001729 ORTHO05D001155 4.8e-18 96.3 324 29.3
QL07p019801 Quercus lobata HOM05D001729 ORTHO05D001155 4.8e-18 96.3 350 27.4
FvH4_6g02171 Fragaria vesca HOM05D001729 ORTHO05D001155 6.3e-18 95.9 319 27.6
FAN08G2539 Fragaria x ananassa HOM05D001729 ORTHO05D001155 6.3e-18 95.9 318 28.3
Rhsim08G0219900 Rhododendron simsii HOM05D001729 ORTHO05D001155 8.2e-18 95.5 335 27.2
FAN05G1447 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.4e-17 94.7 325 28.6
Rhsim08G0238800 Rhododendron simsii HOM05D001729 ORTHO05D001155 1.4e-17 94.7 304 27.3
Lsat_1_v5_gn_6_92061 Lactuca sativa HOM05D001729 ORTHO05D001155 2.4e-17 94.0 319 29.2
RcHm_v2.0_Chr6g0292271 Rosa chinensis HOM05D001729 ORTHO05D001155 3.1e-17 93.6 322 27.0
Ah.07g204710 Amaranthus hybridus HOM05D001729 ORTHO05D001155 4.1e-17 93.2 348 24.1
Prupe.3G059500 Prunus persica HOM05D001729 ORTHO05D001155 4.1e-17 93.2 351 26.8
QL05p008950 Quercus lobata HOM05D001729 ORTHO05D001155 4.1e-17 93.2 120 44.2
Lsat_1_v5_gn_5_31100 Lactuca sativa HOM05D001729 ORTHO05D001155 5.3e-17 92.8 333 29.4
Medtr4g007240 Medicago truncatula HOM05D012242 ORTHO05D001155 5.3e-17 92.8 268 28.4
FAN19G1216 Fragaria x ananassa HOM05D001729 ORTHO05D001155 9.1e-17 92.0 329 24.9
Potri.011G004800 Populus trichocarpa HOM05D001729 ORTHO05D001155 9.1e-17 92.0 356 24.7
Rhsim08G0237800 Rhododendron simsii HOM05D001729 ORTHO05D001155 9.1e-17 92.0 306 27.5
FvH4_6g02041 Fragaria vesca HOM05D001729 ORTHO05D001155 1.2e-16 91.7 340 26.8
MD05G1324200 Malus domestica HOM05D001729 ORTHO05D001155 2.0e-16 90.9 319 26.6
MD10G1000600 Malus domestica HOM05D001729 ORTHO05D001155 2.0e-16 90.9 342 27.5
RcHm_v2.0_Chr6g0291931 Rosa chinensis HOM05D001729 ORTHO05D001155 4.5e-16 89.7 338 27.5
FAN19G1733 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.9e-16 89.4 324 25.9
QL05p074160 Quercus lobata HOM05D001729 ORTHO05D001155 1.3e-15 88.2 185 37.3
HanXRQChr04g0121411 Helianthus annuus HOM05D001729 ORTHO05D001155 2.2e-15 87.4 330 29.4
MD15G1018100 Malus domestica HOM05D001729 ORTHO05D001155 2.2e-15 87.4 261 28.7
DCAR_004585 Daucus carota HOM05D001729 ORTHO05D001155 3.8e-15 86.7 338 25.4
QL08p043324 Quercus lobata HOM05D001729 ORTHO05D001155 1.5e-14 84.7 334 26.9
Sc19g0000590 Simmondsia chinensis HOM05D001729 ORTHO05D001155 7.2e-14 82.4 339 25.4
Gohir.D09G096101 Gossypium hirsutum HOM05D001729 ORTHO05D001155 9.4e-14 82.0 295 25.1
RcHm_v2.0_Chr6g0292091 Rosa chinensis HOM05D001729 ORTHO05D001155 1.2e-13 81.6 323 25.7
COL.COLO4_34020 Corchorus olitorius HOM05D001729 ORTHO05D001155 1.6e-13 81.3 306 25.5
FvH4_6g39371 Fragaria vesca HOM05D001729 ORTHO05D001155 1.6e-13 81.3 332 24.7
FAN09G2757 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.6e-13 81.3 332 24.7
TPR.G3336 Trifolium pratense HOM05D012242 ORTHO05D001155 1.6e-13 81.3 248 27.0
FAN14G1727 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.1e-13 80.9 332 24.7
Gorai.006G112800 Gossypium raimondii HOM05D001729 ORTHO05D001155 2.1e-13 80.9 293 24.6
Lsat_1_v5_gn_5_30901 Lactuca sativa HOM05D001729 ORTHO05D001155 2.1e-13 80.9 324 29.3
Prupe.6G075500 Prunus persica HOM05D001729 ORTHO05D001155 2.7e-13 80.5 280 27.1
Gohir.A09G096401 Gossypium hirsutum HOM05D001729 ORTHO05D001155 6.1e-13 79.3 295 24.4
MD14G1187900 Malus domestica HOM05D001729 ORTHO05D001155 6.1e-13 79.3 322 25.5
RcHm_v2.0_Chr2g0151111 Rosa chinensis HOM05D001729 ORTHO05D001155 6.1e-13 79.3 336 25.3
QL05p009518 Quercus lobata HOM05D001729 ORTHO05D001155 1.4e-12 78.2 264 28.8
MD05G1244200 Malus domestica HOM05D001729 ORTHO05D001155 1.8e-12 77.8 364 25.8
QL05p008000 Quercus lobata HOM05D001729 ORTHO05D001155 1.8e-12 77.8 178 31.5
RcHm_v2.0_Chr6g0275871 Rosa chinensis HOM05D001729 ORTHO05D001155 2.3e-12 77.4 337 24.9
FAN02G3094 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.0e-12 77.0 347 25.1
Prupe.1G509300 Prunus persica HOM05D001729 ORTHO05D001155 3.0e-12 77.0 333 24.9
CSS0028413 Camellia sinensis var. sinensis HOM05D008898 ORTHO05D001155 3.9e-12 76.6 291 25.8
Psat7g263120 Pisum sativum HOM05D012242 ORTHO05D001155 3.9e-12 76.6 253 28.5
RcHm_v2.0_Chr3g0450211 Rosa chinensis HOM05D001729 ORTHO05D001155 5.2e-12 76.3 374 26.7
Prupe.5G070600 Prunus persica HOM05D001729 ORTHO05D001155 8.8e-12 75.5 332 23.8
PGSC0003DMG400005639 Solanum tuberosum HOM05D001729 ORTHO05D001155 8.8e-12 75.5 319 24.5
FAN07G1354 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.5e-11 74.7 352 25.6
Hund15878 Selenicereus undatus HOM05D001729 ORTHO05D001155 2.0e-11 74.3 346 25.1
FvH4_6g46280 Fragaria vesca HOM05D001729 ORTHO05D001155 3.3e-11 73.6 369 25.7
FAN14G4082 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.3e-11 73.6 289 26.6
FvH4_4g18120 Fragaria vesca HOM05D001729 ORTHO05D001155 4.4e-11 73.2 348 25.0
Potri.009G132400 Populus trichocarpa HOM05D001729 ORTHO05D001155 4.4e-11 73.2 342 23.7
FAN07G0163 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.7e-11 72.8 352 25.6
TWI36G0117 Tripterygium wilfordii HOM05D001729 ORTHO05D001155 5.7e-11 72.8 345 24.6
FAN24G2446 Fragaria x ananassa HOM05D001729 ORTHO05D001155 7.4e-11 72.4 235 26.0
PSO782G2276 Papaver somniferum HOM05D008326 ORTHO05D001155 7.4e-11 72.4 256 25.4
FvH4_6g46242 Fragaria vesca HOM05D001729 ORTHO05D001155 1.3e-10 71.6 334 26.3
PSO063G7044 Papaver somniferum HOM05D008326 ORTHO05D001155 2.8e-10 70.5 295 24.4
Hund23305 Selenicereus undatus HOM05D001340 ORTHO05D011069 2.8e-10 70.5 271 25.1
Aqoxy5G01770 Aquilegia oxysepala HOM05D000664 ORTHO05D009863 6.3e-10 69.3 294 23.5
FvH4_6g03181 Fragaria vesca HOM05D001729 ORTHO05D001155 8.2e-10 68.9 313 25.6
FvH4_7g12841 Fragaria vesca HOM05D001729 ORTHO05D001155 8.2e-10 68.9 327 24.5
FAN09G4011 Fragaria x ananassa HOM05D001729 ORTHO05D001155 8.2e-10 68.9 229 27.1
FAN06G3932 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.1e-09 68.6 327 24.5
PSO801G0801 Papaver somniferum HOM05D008326 ORTHO05D001155 1.4e-09 68.2 348 23.3
RcHm_v2.0_Chr2g0123691 Rosa chinensis HOM05D001729 ORTHO05D001155 1.4e-09 68.2 367 23.7
FAN06G0177 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.8e-09 67.8 335 24.5
Nitab4.5_0002383g0130 Nicotiana tabacum HOM05D008898 ORTHO05D001155 2.4e-09 67.4 260 26.5
Prupe.1G510700 Prunus persica HOM05D001729 ORTHO05D001155 2.4e-09 67.4 332 23.8
Sabra09G0102700 Salix brachista HOM05D001729 ORTHO05D001155 2.4e-09 67.4 339 22.7
FAN11G3238 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.1e-09 67.0 340 25.9
PSO407G0006 Papaver somniferum HOM05D008326 ORTHO05D001155 3.1e-09 67.0 301 24.3
FvH4_6g03221 Fragaria vesca HOM05D001729 ORTHO05D001155 1.2e-08 65.1 228 28.9
Nitab4.5_0010853g0020 Nicotiana tabacum HOM05D001729 ORTHO05D001155 1.2e-08 65.1 241 28.6
QL07p036147 Quercus lobata HOM05D001729 ORTHO05D001155 1.2e-08 65.1 106 32.1
FAN26G2860 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.6e-08 64.7 216 25.9
Hund23304 Selenicereus undatus HOM05D009075 ORTHO05D011069 2.0e-08 64.3 212 25.5
PSO782G1123 Papaver somniferum HOM05D008326 ORTHO05D001155 2.6e-08 63.9 209 28.2
FAN09G4239 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.5e-08 63.2 257 28.0
FvH4_6g31981 Fragaria vesca HOM05D001729 ORTHO05D001155 5.9e-08 62.8 323 25.1
PSO210G7271 Papaver somniferum HOM05D008326 ORTHO05D001155 5.9e-08 62.8 283 25.4
FAN21G0135 Fragaria x ananassa HOM05D005271 ORTHO05D006072 1.3e-07 61.6 320 26.2
QL05p009042 Quercus lobata HOM05D001729 ORTHO05D001155 1.7e-07 61.2 120 31.7
Prupe.5G068800 Prunus persica HOM05D001729 ORTHO05D001155 2.9e-07 60.5 280 25.4
FvH4_4g17783 Fragaria vesca HOM05D001729 ORTHO05D001155 8.5e-07 58.9 198 29.8
RcHm_v2.0_Chr5g0021011 Rosa chinensis HOM05D001729 ORTHO05D001155 1.5e-06 58.2 343 23.3
PSO210G3857 Papaver somniferum HOM05D008326 ORTHO05D001155 2.5e-06 57.4 269 24.2
FAN15G0828 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.2e-06 57.0 231 27.7
PSO063G2324 Papaver somniferum HOM05D008326 ORTHO05D001155 3.2e-06 57.0 262 22.1
RcHm_v2.0_Chr7g0221261 Rosa chinensis HOM05D001729 ORTHO05D001155 3.2e-06 57.0 145 31.7
CiPaw.01G207700 Carya illinoinensis HOM05D000664 ORTHO05D000491 4.2e-06 56.6 157 31.2
RcHm_v2.0_Chr4g0398061 Rosa chinensis HOM05D000664 ORTHO05D000491 7.2e-06 55.8 184 25.5
AUR62015660 Chenopodium quinoa HOM05D001340 ORTHO05D005342 9.4e-06 55.5 282 23.0
FAN14G5949 Fragaria x ananassa HOM05D001729 ORTHO05D001155 9.4e-06 55.5 130 31.5
PSO541G4053 Papaver somniferum HOM05D008326 ORTHO05D001155 9.4e-06 55.5 154 27.3


User provided reference genes

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