Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p074082 Quercus lobata HOM05D005739 ORTHO05D007740 8.7e-207 723.4 362 100.0
Cfa000251 Carpinus fangiana HOM05D005739 ORTHO05D007740 1.6e-181 639.4 363 87.1
Haze_06773 Corylus avellana HOM05D005739 ORTHO05D007740 2.4e-164 582.4 328 87.8
Atru.chr10.2176 Acer truncatum HOM05D005739 ORTHO05D007740 3.1e-164 582.0 362 79.3
Potri.011G000100 Populus trichocarpa HOM05D005739 ORTHO05D007740 1.4e-161 573.2 363 77.1
MD10G1317700 Malus domestica HOM05D005739 ORTHO05D007740 5.5e-161 571.2 363 77.1
TWI38G1065 Tripterygium wilfordii HOM05D005739 ORTHO05D007740 1.2e-160 570.1 363 77.7
Ciclev10015698m.g Citrus clementina HOM05D005739 ORTHO05D007740 8.8e-159 563.9 363 76.0
Sabra11G0000600 Salix brachista HOM05D005739 ORTHO05D007740 8.8e-159 563.9 363 76.3
Dinv13869 Davidia involucrata HOM05D005739 ORTHO05D007740 3.3e-158 562.0 362 76.8
CsaV3_6G049150 Cucumis sativus L. HOM05D005739 ORTHO05D007740 1.7e-157 559.7 355 75.8
RcHm_v2.0_Chr5g0003721 Rosa chinensis HOM05D005739 ORTHO05D007740 3.7e-157 558.5 362 75.4
arahy.Tifrunner.gnm1.ann1.GPHX1M Arachis hypogaea HOM05D005739 ORTHO05D007740 1.4e-156 556.6 365 74.2
Duzib235G0413 Durio zibethinus HOM05D005739 ORTHO05D007740 1.4e-156 556.6 362 75.1
VMungo1215G0361 Vigna mungo HOM05D005739 ORTHO05D007740 2.4e-156 555.8 365 74.2
MELO3C007380.2 Cucumis melo HOM05D005739 ORTHO05D007740 3.1e-156 555.4 355 75.5
COL.COLO4_31742 Corchorus olitorius HOM05D005739 ORTHO05D007740 4.1e-156 555.1 363 75.5
GSVIVG01012654001 Vitis vinifera HOM05D005739 ORTHO05D007740 7.0e-156 554.3 363 74.7
arahy.Tifrunner.gnm1.ann1.HAY2RB Arachis hypogaea HOM05D005739 ORTHO05D007740 2.6e-155 552.4 365 74.2
FvH4_3g02490 Fragaria vesca HOM05D005739 ORTHO05D007740 2.6e-155 552.4 362 74.0
Hma1.2p1_0813F.1_g222580 Hydrangea macrophylla HOM05D005739 ORTHO05D007740 3.5e-155 552.0 360 75.6
TAR627G1089 Trochodendron aralioides HOM05D005739 ORTHO05D007740 1.3e-154 550.1 363 74.1
CSS0045804 Camellia sinensis var. sinensis HOM05D005739 ORTHO05D007740 2.2e-154 549.3 363 74.7
Psat4g007680 Pisum sativum HOM05D005739 ORTHO05D007740 2.9e-154 548.9 366 72.4
Nn1g03584 Nelumbo nucifera HOM05D005739 ORTHO05D007740 3.8e-154 548.5 362 74.0
Ca_21095_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 8.5e-154 547.4 367 72.8
Ca_30203_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 8.5e-154 547.4 367 72.8
Thecc.06G217300 Theobroma cacao HOM05D005739 ORTHO05D007740 1.1e-153 547.0 362 74.6
Actinidia11847 Actinidia chinensis HOM05D005739 ORTHO05D007740 1.5e-153 546.6 363 73.8
Gorai.010G179000 Gossypium raimondii HOM05D005739 ORTHO05D007740 2.5e-153 545.8 362 73.5
Phvul.003G077000 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 2.5e-153 545.8 365 72.6
Gohir.D06G153000 Gossypium hirsutum HOM05D005739 ORTHO05D007740 3.2e-153 545.4 362 73.5
TPR.G37091 Trifolium pratense HOM05D005739 ORTHO05D007740 7.2e-153 544.3 365 72.9
Lj6g0027190 Lotus japonicus HOM05D005739 ORTHO05D007740 2.1e-152 542.7 365 73.7
Glyma.07G258900 Glycine max HOM05D005739 ORTHO05D007740 1.8e-151 539.7 361 72.0
FAN25G0806 Fragaria x ananassa HOM05D005739 ORTHO05D007740 1.2e-150 537.0 361 72.0
PGR004G1404 Punica granatum HOM05D005739 ORTHO05D007740 5.7e-150 534.6 360 72.5
AL6G48370 Arabidopsis lyrata HOM05D005739 ORTHO05D007740 2.8e-149 532.3 358 73.2
Glyma.13G206500 Glycine max HOM05D005739 ORTHO05D007740 2.8e-149 532.3 360 71.9
Sed0020639 Sechium edule HOM05D005739 ORTHO05D007740 2.8e-149 532.3 355 72.4
A09p26050 Brassica napus HOM05D005739 ORTHO05D007740 8.2e-149 530.8 358 72.3
Glyma.15G106200 Glycine max HOM05D005739 ORTHO05D007740 1.1e-148 530.4 359 71.6
EL10Ac8g20019 Beta vulgaris HOM05D005739 ORTHO05D007740 2.4e-148 529.3 359 71.6
AT4G04880 Arabidopsis thaliana HOM05D005739 ORTHO05D007740 3.1e-148 528.9 358 73.2
DCAR_008137 Daucus carota HOM05D005739 ORTHO05D007740 3.1e-148 528.9 363 71.9
Carub.0006s3279 Capsella rubella HOM05D005739 ORTHO05D007740 5.3e-148 528.1 358 72.3
BraA09t38171Z Brassica rapa HOM05D005739 ORTHO05D007740 1.6e-147 526.6 358 71.8
Thhalv10028765m.g Eutrema salsugineum HOM05D005739 ORTHO05D007740 1.6e-147 526.6 359 71.3
Sp6g04100 Schrenkiella parvula HOM05D005739 ORTHO05D007740 2.7e-147 525.8 358 72.9
Lalb_Chr20g0118561 Lupinus albus HOM05D005739 ORTHO05D007740 5.9e-147 524.6 366 71.3
ClCG01G022090 Citrullus lanatus HOM05D005739 ORTHO05D007740 2.2e-146 522.7 355 72.4
BcaC04g21334 Brassica carinata HOM05D005739 ORTHO05D007740 2.9e-146 522.3 358 71.2
BolC9t56140H Brassica oleracea HOM05D005739 ORTHO05D007740 2.9e-146 522.3 358 71.2
CARHR252690 Cardamine hirsuta HOM05D005739 ORTHO05D007740 8.5e-146 520.8 358 71.5
PGSC0003DMG400011257 Solanum tuberosum HOM05D005739 ORTHO05D007740 2.5e-145 519.2 362 71.0
VMungo0540G2038 Vigna mungo HOM05D005739 ORTHO05D007740 2.5e-145 519.2 359 71.0
Cc09_g01940 Coffea canephora HOM05D005739 ORTHO05D007740 3.2e-145 518.8 354 71.2
Sed0022137 Sechium edule HOM05D005739 ORTHO05D007740 3.2e-145 518.8 355 70.7
Migut.M01296 Erythranthe guttata HOM05D005739 ORTHO05D007740 7.2e-145 517.7 355 70.4
Solyc10g005310.3 Solanum lycopersicum HOM05D005739 ORTHO05D007740 1.0e-143 513.8 362 69.9
Aa31LG9G9620 Aethionema arabicum HOM05D005739 ORTHO05D007740 1.4e-143 513.5 369 68.6
Eucgr.D01304 Eucalyptus grandis HOM05D005739 ORTHO05D007740 1.4e-143 513.5 354 70.9
MSTRG.15974 Avicennia marina HOM05D005739 ORTHO05D007740 2.3e-143 512.7 354 70.6
Phvul.006G151100 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 4.0e-143 511.9 359 69.9
SalBow8G1417 Salvia bowleyana HOM05D005739 ORTHO05D007740 4.0e-143 511.9 364 69.8
BcaB01g01842 Brassica carinata HOM05D005739 ORTHO05D007740 5.2e-143 511.5 358 70.1
CDE11G0579 Ceratophyllum demersum HOM05D005739 ORTHO05D007740 2.6e-142 509.2 358 69.6
Peaxi162Scf00203g01110 Petunia axillaris HOM05D005739 ORTHO05D007740 4.4e-142 508.4 356 71.3
HanXRQChr16g0515931 Helianthus annuus HOM05D005739 ORTHO05D007740 7.5e-142 507.7 358 69.0
vmacro15817 Vaccinium macrocarpon HOM05D005739 ORTHO05D007740 2.8e-141 505.8 379 68.1
ATR0752G010 Amborella trichopoda HOM05D005739 ORTHO05D007740 4.8e-141 505.0 354 70.3
Cpa.g.sc198.24 Carica papaya HOM05D005739 ORTHO05D007740 6.3e-141 504.6 339 75.2
THA.LOC104812968 Tarenaya hassleriana HOM05D005739 ORTHO05D007740 1.4e-140 503.4 337 73.0
Rhsim02G0110500 Rhododendron simsii HOM05D005739 ORTHO05D007740 2.4e-140 502.7 379 67.0
PSO832G4144 Papaver somniferum HOM05D005739 ORTHO05D007740 4.1e-140 501.9 360 68.1
CiPaw.10G069300 Carya illinoinensis HOM05D005739 ORTHO05D007740 2.0e-139 499.6 287 86.8
Nitab4.5_0007448g0040 Nicotiana tabacum HOM05D005739 ORTHO05D007740 1.3e-138 496.9 347 71.8
Ca_00625_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.7e-138 496.5 363 68.9
PSO210G3635 Papaver somniferum HOM05D005739 ORTHO05D007740 6.5e-138 494.6 360 67.2
Gohir.A06G147200 Gossypium hirsutum HOM05D005739 ORTHO05D007740 1.1e-137 493.8 337 72.7
Oeu063902.1 Olea europaea HOM05D005739 ORTHO05D007740 1.1e-137 493.8 362 67.4
Lj1C1227G9 Lonicera japonica HOM05D005739 ORTHO05D007740 1.9e-137 493.0 363 70.2
Psat1g181440 Pisum sativum HOM05D005739 ORTHO05D007740 1.9e-137 493.0 364 68.1
ECA234G0122 Erigeron canadensis HOM05D005739 ORTHO05D007740 3.2e-137 492.3 359 66.9
Lsat_1_v5_gn_4_60101 Lactuca sativa HOM05D005739 ORTHO05D007740 4.2e-137 491.9 345 68.7
SGA_v2.0_scaffold4G01929 Striga asiatica HOM05D005739 ORTHO05D007740 2.8e-136 489.2 370 67.8
Medtr2g022780 Medicago truncatula HOM05D005739 ORTHO05D007740 4.7e-136 488.4 363 68.3
Ah.14g088100 Amaranthus hybridus HOM05D005739 ORTHO05D007740 8.8e-135 484.2 438 59.1
C09p33050 Brassica napus HOM05D005739 ORTHO05D007740 8.8e-135 484.2 324 72.2
Medtr4g131840 Medicago truncatula HOM05D005739 ORTHO05D007740 1.2e-134 483.8 337 70.3
TPR.G7643 Trifolium pratense HOM05D005739 ORTHO05D007740 2.0e-134 483.0 364 67.0
Zm00001eb110820 Zea mays HOM05D005739 ORTHO05D007740 3.4e-134 482.3 358 65.6
Os07g0661000 Oryza sativa ssp. japonica HOM05D005739 ORTHO05D007740 7.5e-134 481.1 359 65.2
HPP92_016316 Vanilla planifolia HOM05D005739 ORTHO05D007740 8.3e-133 477.6 358 64.5
AUR62012674 Chenopodium quinoa HOM05D005739 ORTHO05D007740 1.4e-132 476.9 359 68.2
Manes.16G010200 Manihot esculenta HOM05D005739 ORTHO05D007740 1.8e-132 476.5 314 74.2
Nitab4.5_0002155g0060 Nicotiana tabacum HOM05D005739 ORTHO05D007740 7.3e-129 464.5 402 62.2
AUR62021982 Chenopodium quinoa HOM05D005739 ORTHO05D007740 3.0e-127 459.1 421 58.9
MBI18_g35070_MAGBIO Magnolia biondii HOM05D005739 ORTHO05D007740 1.2e-126 457.2 316 71.5
SEGI_12484 Sequoiadendron giganteum HOM05D005739 ORTHO05D007740 2.2e-125 453.0 358 63.1
Prupe.4G024100 Prunus persica HOM05D005739 ORTHO05D007740 3.2e-124 449.1 275 79.6
CANSAT56G1696 Cannabis sativa HOM05D005739 ORTHO05D007740 6.2e-120 434.9 302 72.2
Sc06g0010750 Simmondsia chinensis HOM05D005739 ORTHO05D007740 8.9e-119 431.0 288 74.7
Dinv17816 Davidia involucrata HOM05D005739 ORTHO05D007740 1.0e-114 417.5 282 73.8
HPP92_016297 Vanilla planifolia HOM05D005739 ORTHO05D007740 2.6e-110 402.9 358 57.8
unitig_92.g28118 Utricularia gibba HOM05D005739 ORTHO05D007740 4.4e-110 402.1 313 64.9
Dinv20033 Davidia involucrata HOM05D005739 ORTHO05D007740 1.4e-108 397.1 311 66.9
SMO343G0036 Selaginella moellendorffii HOM05D005739 ORTHO05D007740 5.1e-106 388.7 356 56.5
Mapoly0023s0135 Marchantia polymorpha HOM05D005739 ORTHO05D007740 2.2e-101 373.2 349 56.4
Aqoxy1G03635 Aquilegia oxysepala HOM05D005739 ORTHO05D007740 6.2e-96 355.1 267 66.7
Hund23487 Selenicereus undatus HOM05D005739 ORTHO05D007740 1.2e-94 350.9 327 58.7
Sopen10g001300 Solanum pennellii HOM05D005739 ORTHO05D007740 2.6e-94 349.7 256 66.4
CAN.G105.13 Capsicum annuum HOM05D005739 ORTHO05D007740 2.4e-92 343.2 264 66.3
AagrBONN_evm.TU.Sc2ySwM_368.535 Anthoceros agrestis HOM05D005739 ORTHO05D007740 5.3e-87 325.5 357 49.6
Pp3c11_7970 Physcomitrium patens HOM05D005739 ORTHO05D007740 8.1e-80 301.6 310 51.0
Cre03.g161000 Chlamydomonas reinhardtii HOM05D005739 ORTHO05D007740 5.1e-74 282.3 453 38.2
arahy.Tifrunner.gnm1.ann1.H0U1UD Arachis hypogaea HOM05D005739 ORTHO05D007740 7.1e-68 261.9 358 46.9
arahy.Tifrunner.gnm1.ann1.53BRPK Arachis hypogaea HOM05D005739 ORTHO05D007740 6.1e-59 232.3 175 70.9
arahy.Tifrunner.gnm1.ann1.FSQL8E Arachis hypogaea HOM05D005739 ORTHO05D007740 1.8e-58 230.7 271 51.7
MCO11G903 Micromonas commoda HOM05D005739 ORTHO05D007740 6.7e-58 228.8 353 40.5
arahy.Tifrunner.gnm1.ann1.Q9UH73 Arachis hypogaea HOM05D005739 ORTHO05D007740 1.3e-56 224.6 358 39.9
arahy.Tifrunner.gnm1.ann1.KZ0328 Arachis hypogaea HOM05D005739 ORTHO05D007740 5.9e-54 215.7 240 54.2
arahy.Tifrunner.gnm1.ann1.7V36PE Arachis hypogaea HOM05D005739 ORTHO05D007740 5.5e-52 209.1 210 57.6
arahy.Tifrunner.gnm1.ann1.0E5R4V Arachis hypogaea HOM05D005739 ORTHO05D007740 5.1e-50 202.6 184 63.0
arahy.Tifrunner.gnm1.ann1.B9PES8 Arachis hypogaea HOM05D005739 ORTHO05D007740 3.3e-49 199.9 184 62.0
arahy.Tifrunner.gnm1.ann1.AD56MI Arachis hypogaea HOM05D005739 ORTHO05D083983 3.4e-46 189.9 244 49.2
CANSAT64G1767 Cannabis sativa HOM05D005739 ORTHO05D033954 2.2e-40 170.6 113 70.8
CANSAT56G0563 Cannabis sativa HOM05D005739 ORTHO05D113818 1.0e-26 125.2 107 60.7
arahy.Tifrunner.gnm1.ann1.39644B Arachis hypogaea HOM05D005739 ORTHO05D007740 4.5e-22 109.8 203 39.4
RcHm_v2.0_Chr5g0051251 Rosa chinensis HOM05D005739 ORTHO05D033954 5.5e-20 102.8 68 69.1
SEGI_28449 Sequoiadendron giganteum HOM05D005739 ORTHO05D033954 2.0e-17 94.4 72 61.1
Ca_29425_v3 Cicer arietinum L. HOM05D005739 ORTHO05D044167 5.4e-15 86.3 221 28.5
arahy.Tifrunner.gnm1.ann1.3ZZ8UM Arachis hypogaea HOM05D000187 ORTHO05D000230 9.2e-15 85.5 49 81.6
arahy.Tifrunner.gnm1.ann1.ZUJ3H1 Arachis hypogaea HOM05D005739 ORTHO05D083715 3.4e-09 67.0 35 85.7
Nn1g07096 Nelumbo nucifera HOM05D005739 ORTHO05D007740 6.4e-08 62.8 83 41.0


User provided reference genes

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