Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p073032 Quercus lobata HOM05D007037 ORTHO05D006691 7.3e-37 156.8 82 100.0
CiPaw.09G092600 Carya illinoinensis HOM05D007037 ORTHO05D006691 6.2e-28 127.1 78 84.6
TAR624G1029 Trochodendron aralioides HOM05D007037 ORTHO05D006691 6.7e-22 107.1 84 67.9
Nitab4.5_0009030g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 8.7e-22 106.7 81 65.4
Manes.16G006400 Manihot esculenta HOM05D007037 ORTHO05D006691 1.1e-21 106.3 78 71.8
Nitab4.5_0000005g0340 Nicotiana tabacum HOM05D007037 ORTHO05D006691 1.1e-21 106.3 81 65.4
Manes.01G159201 Manihot esculenta HOM05D007037 ORTHO05D006691 5.6e-21 104.0 78 70.5
CSS0006945 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 7.4e-21 103.6 82 65.9
Prupe.4G019700 Prunus persica HOM05D007037 ORTHO05D006691 2.8e-20 101.7 79 64.6
MD10G1322200 Malus domestica HOM05D007037 ORTHO05D006691 4.8e-20 100.9 76 64.5
Potri.004G013601 Populus trichocarpa HOM05D007037 ORTHO05D006691 4.8e-20 100.9 76 68.4
RcHm_v2.0_Chr5g0002881 Rosa chinensis HOM05D007037 ORTHO05D006691 8.1e-20 100.1 81 64.2
Atru.chr10.2236 Acer truncatum HOM05D007037 ORTHO05D006691 1.1e-19 99.8 76 68.4
MD05G1347800 Malus domestica HOM05D007037 ORTHO05D006691 3.1e-19 98.2 79 62.0
Oeu025269.1 Olea europaea HOM05D007037 ORTHO05D006691 4.0e-19 97.8 80 65.0
Dinv13899 Davidia involucrata HOM05D001191 ORTHO05D000979 5.3e-19 97.4 83 67.5
Potri.011G004400 Populus trichocarpa HOM05D007037 ORTHO05D006691 6.9e-19 97.1 76 64.5
Thecc.06G221700 Theobroma cacao HOM05D007037 ORTHO05D006691 6.9e-19 97.1 79 63.3
FAN21G2981 Fragaria x ananassa HOM05D001191 ORTHO05D000979 9.0e-19 96.7 81 61.7
Duzib192G0147 Durio zibethinus HOM05D007037 ORTHO05D006691 1.2e-18 96.3 79 67.1
FAN25G2740 Fragaria x ananassa HOM05D007037 ORTHO05D006691 1.2e-18 96.3 78 65.4
Hma1.2p1_0749F.1_g212630 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 4.5e-18 94.4 81 63.0
Hma1.2p1_0749F.1_g212635 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 4.5e-18 94.4 81 63.0
DCAR_008156 Daucus carota HOM05D007037 ORTHO05D006691 1.7e-17 92.4 82 59.8
Eucgr.E04050 Eucalyptus grandis HOM05D007037 ORTHO05D006691 4.9e-17 90.9 79 60.8
Gohir.A05G170900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 4.9e-17 90.9 79 62.0
Gorai.009G179200 Gossypium raimondii HOM05D007037 ORTHO05D006691 8.4e-17 90.1 79 62.0
COL.COLO4_00342 Corchorus olitorius HOM05D007037 ORTHO05D006691 1.4e-16 89.4 80 61.2
Nitab4.5_0005074g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 3.2e-16 88.2 82 61.0
Peaxi162Scf00331g00119 Petunia axillaris HOM05D007037 ORTHO05D006691 3.2e-16 88.2 82 61.0
Cc09_g01610 Coffea canephora HOM05D007037 ORTHO05D006691 4.2e-16 87.8 80 60.0
Gohir.D05G173900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 4.2e-16 87.8 79 60.8
CSS0026389 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 5.5e-16 87.4 82 59.8
Nitab4.5_0002827g0030 Nicotiana tabacum HOM05D007037 ORTHO05D006691 2.7e-15 85.1 82 58.5
Lsat_1_v5_gn_4_60821 Lactuca sativa HOM05D007037 ORTHO05D006691 3.5e-15 84.7 82 57.3
Medtr2g023440 Medicago truncatula HOM05D007037 ORTHO05D006691 6.0e-15 84.0 81 58.0
Aqoxy1G02111 Aquilegia oxysepala HOM05D007037 ORTHO05D006691 1.8e-14 82.4 74 59.5
ClCG01G021940 Citrullus lanatus HOM05D007037 ORTHO05D006691 5.1e-14 80.9 80 57.5
CsaV3_6G049020 Cucumis sativus L. HOM05D007037 ORTHO05D006691 5.1e-14 80.9 77 57.1
Sopen02g011150 Solanum pennellii HOM05D007037 ORTHO05D006691 8.7e-14 80.1 81 56.8
CiPaw.10G071700 Carya illinoinensis HOM05D007037 ORTHO05D006691 1.9e-13 79.0 79 54.4
ECA234G0681 Erigeron canadensis HOM05D007037 ORTHO05D006691 4.3e-13 77.8 80 53.8
TPR.G13436 Trifolium pratense HOM05D007037 ORTHO05D006691 4.3e-13 77.8 80 56.2
FvH4_3g01970 Fragaria vesca HOM05D007037 ORTHO05D006691 5.7e-13 77.4 81 53.1
Sed0008683 Sechium edule HOM05D007037 ORTHO05D006691 7.4e-13 77.0 77 51.9
Lj4g0019440 Lotus japonicus HOM05D007037 ORTHO05D006691 9.6e-13 76.6 79 58.2
vmacro23211 Vaccinium macrocarpon HOM05D007037 ORTHO05D006691 9.6e-13 76.6 78 51.3
Phvul.003G079400 Phaseolus vulgaris HOM05D007037 ORTHO05D006691 2.8e-12 75.1 79 55.7
Ca_26471_v3 Cicer arietinum L. HOM05D007037 ORTHO05D006691 6.2e-12 73.9 90 48.9
PGSC0003DMG400016450 Solanum tuberosum HOM05D007037 ORTHO05D006691 8.2e-12 73.6 84 51.2
PGSC0003DMG400019869 Solanum tuberosum HOM05D007037 ORTHO05D006691 1.1e-11 73.2 78 56.4
Ca_21080_v3 Cicer arietinum L. HOM05D007037 ORTHO05D006691 1.8e-11 72.4 82 52.4
Haze_06807 Corylus avellana HOM05D007037 ORTHO05D006691 1.8e-11 72.4 79 51.9
Cfa000214 Carpinus fangiana HOM05D007037 ORTHO05D006691 3.1e-11 71.6 78 51.3
Glyma.17G012900 Glycine max HOM05D007037 ORTHO05D006691 3.1e-11 71.6 79 53.2
Actinidia09718 Actinidia chinensis HOM05D007037 ORTHO05D006691 4.0e-11 71.2 84 51.2
Ciclev10018055m.g Citrus clementina HOM05D007037 ORTHO05D006691 4.0e-11 71.2 78 55.1
Sabra04G0006400 Salix brachista HOM05D007037 ORTHO05D006691 4.0e-11 71.2 76 52.6
Sed0010286 Sechium edule HOM05D007037 ORTHO05D006691 4.0e-11 71.2 78 56.4
Glyma.07G261100 Glycine max HOM05D007037 ORTHO05D006691 5.3e-11 70.9 79 53.2
Lj6g0006723 Lotus japonicus HOM05D007037 ORTHO05D006691 6.9e-11 70.5 76 52.6
TPR.G37004 Trifolium pratense HOM05D007037 ORTHO05D006691 6.9e-11 70.5 82 51.2
Sopen02g025300 Solanum pennellii HOM05D007037 ORTHO05D006691 1.2e-10 69.7 84 50.0
SalBow8G3366 Salvia bowleyana HOM05D007037 ORTHO05D006691 1.5e-10 69.3 67 55.2
Sabra11G0003500 Salix brachista HOM05D007037 ORTHO05D006691 5.8e-10 67.4 77 46.8
Peaxi162Scf01204g00120 Petunia axillaris HOM05D007037 ORTHO05D006691 1.0e-09 66.6 81 50.6
Carub.0001s1138 Capsella rubella HOM05D007037 ORTHO05D006691 2.9e-09 65.1 80 43.8
Gohir.D13G171150 Gossypium hirsutum HOM05D007037 ORTHO05D006691 5.0e-09 64.3 78 51.3
Medtr4g132230 Medicago truncatula HOM05D007037 ORTHO05D006691 6.5e-09 63.9 79 49.4
Gorai.013G189700 Gossypium raimondii HOM05D007037 ORTHO05D006691 8.4e-09 63.5 78 51.3
Aqoxy4G01827 Aquilegia oxysepala HOM05D009550 ORTHO05D006691 1.1e-08 63.2 84 48.8
CARHR012050 Cardamine hirsuta HOM05D007037 ORTHO05D006691 1.1e-08 63.2 81 42.0
Zm00001eb048920 Zea mays HOM05D007037 ORTHO05D006691 1.1e-08 63.2 78 52.6
Migut.M01325 Erythranthe guttata HOM05D007037 ORTHO05D006691 1.4e-08 62.8 80 46.2
Thhalv10009555m.g Eutrema salsugineum HOM05D001191 ORTHO05D000979 1.4e-08 62.8 82 43.9
vmacro15807 Vaccinium macrocarpon HOM05D007037 ORTHO05D006691 1.4e-08 62.8 88 43.2
Glyma.09G004000 Glycine max HOM05D007037 ORTHO05D006691 1.9e-08 62.4 79 46.8
THA.LOC104823525 Tarenaya hassleriana HOM05D007037 ORTHO05D006691 1.9e-08 62.4 85 47.1
Gohir.D11G101450 Gossypium hirsutum HOM05D007037 ORTHO05D006691 2.5e-08 62.0 78 47.4
Gorai.007G108200 Gossypium raimondii HOM05D007037 ORTHO05D006691 2.5e-08 62.0 78 47.4
TAR626G0921 Trochodendron aralioides HOM05D007037 ORTHO05D006691 2.5e-08 62.0 62 58.1
Rhsim13G0153300 Rhododendron simsii HOM05D007037 ORTHO05D006691 3.2e-08 61.6 79 45.6
Psat4g006560 Pisum sativum HOM05D007037 ORTHO05D006691 4.2e-08 61.2 77 49.4
Lalb_Chr13g0304241 Lupinus albus HOM05D007037 ORTHO05D006691 5.5e-08 60.8 81 49.4
arahy.Tifrunner.gnm1.ann1.98H95S Arachis hypogaea HOM05D007037 ORTHO05D006691 7.1e-08 60.5 80 47.5
Rhsim02G0106600 Rhododendron simsii HOM05D007037 ORTHO05D006691 7.1e-08 60.5 90 40.0
AT1G11740 Arabidopsis thaliana HOM05D001191 ORTHO05D000979 9.3e-08 60.1 81 40.7
arahy.Tifrunner.gnm1.ann1.CZMF37 Arachis hypogaea HOM05D007037 ORTHO05D006691 9.3e-08 60.1 79 48.1
AL1G22910 Arabidopsis lyrata HOM05D001191 ORTHO05D000979 2.1e-07 58.9 81 39.5
Gohir.D13G171533 Gossypium hirsutum HOM05D007037 ORTHO05D006691 2.1e-07 58.9 79 48.1
Sp1g10350 Schrenkiella parvula HOM05D001191 ORTHO05D000979 2.7e-07 58.5 81 42.0
unitig_32.g11533 Utricularia gibba HOM05D007037 ORTHO05D006691 2.7e-07 58.5 81 43.2
Aa31LG1G3030 Aethionema arabicum HOM05D007037 ORTHO05D006691 3.5e-07 58.2 82 41.5
Gohir.A11G096766 Gossypium hirsutum HOM05D007037 ORTHO05D006691 4.6e-07 57.8 78 44.9
Potri.014G153900 Populus trichocarpa HOM05D009550 ORTHO05D006691 4.6e-07 57.8 86 45.3
EL10Ac8g20067 Beta vulgaris HOM05D007037 ORTHO05D006691 1.0e-06 56.6 77 46.8
Cc05_g04380 Coffea canephora HOM05D007037 ORTHO05D006691 1.8e-06 55.8 83 44.6
CSS0005463 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 3.0e-06 55.1 89 42.7
Os03g0574600 Oryza sativa ssp. japonica HOM05D007037 ORTHO05D006691 3.9e-06 54.7 81 46.9
C05p09860 Brassica napus HOM05D007037 ORTHO05D006691 5.1e-06 54.3 82 39.0
HanXRQChr16g0506491 Helianthus annuus HOM05D007037 ORTHO05D006691 5.1e-06 54.3 87 42.5
AT1G62045 Arabidopsis thaliana HOM05D007037 ORTHO05D006691 6.7e-06 53.9 80 43.8
Lalb_Chr07g0177181 Lupinus albus HOM05D007037 ORTHO05D006691 6.7e-06 53.9 80 43.8
Nn1g07147 Nelumbo nucifera HOM05D009550 ORTHO05D006691 6.7e-06 53.9 86 43.0
unitig_748.g7588 Utricularia gibba HOM05D007037 ORTHO05D006691 6.7e-06 53.9 82 40.2
BcaC05g25043 Brassica carinata HOM05D001191 ORTHO05D000979 8.7e-06 53.5 82 39.0


User provided reference genes

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