Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p072067 Quercus lobata HOM05D007052 ORTHO05D008871 5.3e-133 477.6 231 100.0
Haze_06850 Corylus avellana HOM05D007052 ORTHO05D008871 3.5e-68 262.3 231 62.3
Cfa000169 Carpinus fangiana HOM05D007052 ORTHO05D008871 4.6e-68 261.9 231 62.8
Potri.011G010300 Populus trichocarpa HOM05D007052 ORTHO05D008871 1.7e-62 243.4 232 57.8
Glyma.15G111400 Glycine max HOM05D007052 ORTHO05D008871 1.1e-61 240.7 231 55.4
VMungo0540G2459 Vigna mungo HOM05D007052 ORTHO05D008871 2.4e-61 239.6 231 56.3
Lj1A1235T90 Lonicera japonica HOM05D007052 ORTHO05D008871 1.3e-59 233.8 232 57.3
Sabra11G0007900 Salix brachista HOM05D007052 ORTHO05D008871 1.7e-59 233.4 232 54.7
Manes.17G028000 Manihot esculenta HOM05D007052 ORTHO05D008871 6.6e-59 231.5 233 55.8
Glyma.09G007000 Glycine max HOM05D007052 ORTHO05D008871 1.1e-58 230.7 231 53.2
Phvul.006G146300 Phaseolus vulgaris HOM05D007052 ORTHO05D008871 1.5e-58 230.3 231 55.0
TWI38G1879 Tripterygium wilfordii HOM05D007052 ORTHO05D008871 2.5e-58 229.6 228 56.1
MD10G1325900 Malus domestica HOM05D007052 ORTHO05D008871 5.6e-58 228.4 235 55.7
GSVIVG01012660001 Vitis vinifera HOM05D007052 ORTHO05D008871 1.6e-57 226.9 229 56.8
Ca_00688_v3 Cicer arietinum L. HOM05D007052 ORTHO05D008871 2.1e-57 226.5 233 54.1
MD05G1351600 Malus domestica HOM05D007052 ORTHO05D008871 4.0e-56 222.2 235 54.5
Medtr2g024300 Medicago truncatula HOM05D007052 ORTHO05D008871 4.0e-56 222.2 232 53.0
Thecc.06G227100 Theobroma cacao HOM05D007052 ORTHO05D008871 5.2e-56 221.9 231 52.8
Duzib235G0934 Durio zibethinus HOM05D007052 ORTHO05D008871 2.0e-55 219.9 232 54.3
Ciclev10016958m.g Citrus clementina HOM05D007052 ORTHO05D008871 2.6e-55 219.5 232 54.7
Aqoxy1G03011 Aquilegia oxysepala HOM05D007052 ORTHO05D008871 3.4e-55 219.2 233 54.1
CANSAT56G3240 Cannabis sativa HOM05D007052 ORTHO05D008871 3.4e-55 219.2 225 56.9
MELO3C007415.2 Cucumis melo HOM05D007052 ORTHO05D008871 5.8e-55 218.4 243 54.3
Rhsim02G0105300 Rhododendron simsii HOM05D007052 ORTHO05D008871 2.2e-54 216.5 229 55.5
Lalb_Chr18g0056571 Lupinus albus HOM05D007052 ORTHO05D008871 4.9e-54 215.3 231 52.4
arahy.Tifrunner.gnm1.ann1.LNF63F Arachis hypogaea HOM05D007052 ORTHO05D008871 1.1e-53 214.2 214 55.1
arahy.Tifrunner.gnm1.ann1.MS5PCD Arachis hypogaea HOM05D007052 ORTHO05D008871 1.1e-53 214.2 214 55.1
TAR627G0466 Trochodendron aralioides HOM05D007052 ORTHO05D008871 1.9e-53 213.4 229 53.3
EL10Ac8g20122 Beta vulgaris HOM05D007052 ORTHO05D008871 5.4e-53 211.8 229 53.7
vmacro15801 Vaccinium macrocarpon HOM05D007052 ORTHO05D008871 1.2e-52 210.7 229 52.8
TPR.G13090 Trifolium pratense HOM05D007052 ORTHO05D008871 1.6e-52 210.3 231 52.4
Sed0006602 Sechium edule HOM05D007052 ORTHO05D008871 2.1e-52 209.9 233 51.5
Lj6g0012328 Lotus japonicus HOM05D007052 ORTHO05D008871 4.6e-52 208.8 232 50.9
PGR042G3505 Punica granatum HOM05D007052 ORTHO05D008871 3.0e-51 206.1 193 58.5
Sc05g0009410 Simmondsia chinensis HOM05D007052 ORTHO05D008871 3.9e-51 205.7 228 54.4
Cc09_g01290 Coffea canephora HOM05D007052 ORTHO05D008871 1.1e-50 204.1 230 52.2
Gohir.A10G011300 Gossypium hirsutum HOM05D007052 ORTHO05D008871 1.5e-50 203.8 235 51.1
Dinv20100 Davidia involucrata HOM05D007052 ORTHO05D008871 1.9e-50 203.4 245 51.0
Gorai.011G012000 Gossypium raimondii HOM05D007052 ORTHO05D008871 3.3e-50 202.6 235 51.1
Lsat_1_v5_gn_1_129560 Lactuca sativa HOM05D007052 ORTHO05D008871 8.1e-49 198.0 226 51.8
Hund21433 Selenicereus undatus HOM05D007052 ORTHO05D008871 1.1e-48 197.6 229 51.5
SGA_v2.0_scaffold7G03781 Striga asiatica HOM05D007052 ORTHO05D008871 3.4e-47 192.6 226 50.0
Eucgr.E03993 Eucalyptus grandis HOM05D007052 ORTHO05D008871 5.8e-47 191.8 233 49.4
AUR62012751 Chenopodium quinoa HOM05D007052 ORTHO05D008871 1.7e-46 190.3 229 50.7
CsaV3_6G048750 Cucumis sativus L. HOM05D007052 ORTHO05D008871 2.2e-46 189.9 210 53.8
CiPaw.09G097200 Carya illinoinensis HOM05D007052 ORTHO05D008871 4.9e-46 188.7 146 66.4
A09p26390 Brassica napus HOM05D007052 ORTHO05D008871 8.4e-46 188.0 229 49.3
BraA09t38213Z Brassica rapa HOM05D007052 ORTHO05D008871 8.4e-46 188.0 229 49.3
PSO675G2240 Papaver somniferum HOM05D007052 ORTHO05D008871 1.9e-45 186.8 231 49.4
C09p33580 Brassica napus HOM05D007052 ORTHO05D008871 2.4e-45 186.4 229 48.9
BolC9t56192H Brassica oleracea HOM05D007052 ORTHO05D008871 2.4e-45 186.4 229 48.9
Actinidia11870 Actinidia chinensis HOM05D007052 ORTHO05D008871 5.4e-45 185.3 185 55.7
BcaC04g21282 Brassica carinata HOM05D007052 ORTHO05D008871 7.1e-45 184.9 229 48.5
Sopen02g025730 Solanum pennellii HOM05D007052 ORTHO05D008871 1.2e-44 184.1 225 48.4
Gohir.D06G156800 Gossypium hirsutum HOM05D007052 ORTHO05D008871 2.1e-44 183.3 232 49.1
ClCG01G021710 Citrullus lanatus HOM05D007052 ORTHO05D008871 3.5e-44 182.6 190 55.8
AT4G04330 Arabidopsis thaliana HOM05D007052 ORTHO05D008871 6.0e-44 181.8 229 48.0
BcaB01g01799 Brassica carinata HOM05D007052 ORTHO05D008871 1.0e-43 181.0 229 48.0
PSO541G4001 Papaver somniferum HOM05D007052 ORTHO05D008871 1.3e-43 180.6 232 48.7
Carub.0006s3216 Capsella rubella HOM05D007052 ORTHO05D008871 3.9e-43 179.1 229 47.2
CARHR253150 Cardamine hirsuta HOM05D007052 ORTHO05D008871 3.9e-43 179.1 229 47.2
Gohir.A06G150600 Gossypium hirsutum HOM05D007052 ORTHO05D008871 6.6e-43 178.3 230 47.8
ECA248G2484 Erigeron canadensis HOM05D007052 ORTHO05D008871 8.7e-43 177.9 185 53.0
CSS0050367 Camellia sinensis var. sinensis HOM05D007052 ORTHO05D008871 1.5e-42 177.2 182 56.0
HanXRQChr01g0006501 Helianthus annuus HOM05D007052 ORTHO05D008871 1.9e-42 176.8 233 47.6
Sp6g04520 Schrenkiella parvula HOM05D007052 ORTHO05D008871 5.6e-42 175.3 228 46.5
THA.LOC104812978 Tarenaya hassleriana HOM05D007052 ORTHO05D008871 7.3e-42 174.9 232 44.8
CAN.G1014.43 Capsicum annuum HOM05D007052 ORTHO05D008871 9.6e-42 174.5 228 46.5
Aa31LG9G9870 Aethionema arabicum HOM05D007052 ORTHO05D008871 1.2e-41 174.1 223 47.5
RcHm_v2.0_Chr5g0002341 Rosa chinensis HOM05D007052 ORTHO05D008871 1.2e-41 174.1 148 64.2
CDE07G0375 Ceratophyllum demersum HOM05D000570 ORTHO05D001174 1.6e-41 173.7 196 50.0
Migut.M01374 Erythranthe guttata HOM05D007052 ORTHO05D008871 6.2e-41 171.8 227 46.3
Ah.09g234570 Amaranthus hybridus HOM05D007052 ORTHO05D008871 1.4e-40 170.6 220 47.7
DCAR_024989 Daucus carota HOM05D007052 ORTHO05D008871 6.9e-40 168.3 179 51.4
AL6G47870 Arabidopsis lyrata HOM05D007052 ORTHO05D008871 1.5e-39 167.2 184 51.1
ATR0624G054 Amborella trichopoda HOM05D007052 ORTHO05D008871 2.6e-39 166.4 231 45.5
COL.COLO4_31826 Corchorus olitorius HOM05D007052 ORTHO05D008871 3.8e-38 162.5 185 50.3
Psat1g177840 Pisum sativum HOM05D007052 ORTHO05D008871 2.4e-37 159.8 143 58.0
Os08g0425200 Oryza sativa ssp. japonica HOM05D007052 ORTHO05D008871 3.2e-37 159.5 195 46.7
Prupe.4G016000 Prunus persica HOM05D007052 ORTHO05D008871 3.2e-37 159.5 145 61.4
AUR62021907 Chenopodium quinoa HOM05D007052 ORTHO05D008871 7.1e-37 158.3 230 45.2
Solyc02g081060.4 Solanum lycopersicum HOM05D007052 ORTHO05D008871 2.7e-36 156.4 179 49.7
PGSC0003DMG400016462 Solanum tuberosum HOM05D007052 ORTHO05D008871 3.5e-36 156.0 210 47.1
Peaxi162Scf00178g00039 Petunia axillaris HOM05D007052 ORTHO05D008871 1.0e-35 154.5 179 49.2
Hund23440 Selenicereus undatus HOM05D007052 ORTHO05D008871 3.9e-35 152.5 179 46.9
AagrBONN_evm.TU.Sc2ySwM_117.3173 Anthoceros agrestis HOM05D007052 ORTHO05D008871 1.3e-33 147.5 184 44.0
Pp3c25_6660 Physcomitrium patens HOM05D007052 ORTHO05D008871 6.2e-33 145.2 183 44.8
Atru.chr10.2273 Acer truncatum HOM05D007052 ORTHO05D008871 2.4e-32 143.3 141 52.5
Nn1g07250 Nelumbo nucifera HOM05D007052 ORTHO05D008871 2.0e-31 140.2 136 56.6
RcHm_v2.0_Chr7g0236991 Rosa chinensis HOM05D007052 ORTHO05D008871 1.3e-30 137.5 224 41.1
SMO118G0387 Selaginella moellendorffii HOM05D007052 ORTHO05D008871 2.2e-30 136.7 180 41.1
Thhalv10029002m.g Eutrema salsugineum HOM05D007052 ORTHO05D008871 8.4e-30 134.8 195 43.6
SalBow8G1921 Salvia bowleyana HOM05D007052 ORTHO05D008871 2.5e-26 123.2 138 48.6
FAN21G0414 Fragaria x ananassa HOM05D007052 ORTHO05D008871 1.2e-23 114.4 85 71.8
BcaC04g21271 Brassica carinata HOM05D004489 ORTHO05D039740 1.9e-21 107.1 117 49.6
arahy.Tifrunner.gnm1.ann1.ZUMJ7A Arachis hypogaea HOM05D007052 ORTHO05D008871 7.9e-20 101.7 180 38.9
Zm00001eb179210 Zea mays HOM05D007052 ORTHO05D008871 3.0e-19 99.8 99 55.6
Gorai.010G183200 Gossypium raimondii HOM05D007052 ORTHO05D008871 3.7e-17 92.8 232 32.3
RcHm_v2.0_Chr5g0002331 Rosa chinensis HOM05D007052 ORTHO05D008871 9.0e-16 88.2 50 82.0
Nitab4.5_0001409g0190 Nicotiana tabacum HOM05D007052 ORTHO05D008871 8.4e-14 81.6 85 58.8
Cre07.g339000 Chlamydomonas reinhardtii HOM05D007052 ORTHO05D008871 4.2e-13 79.3 176 33.0
FAN25G3667 Fragaria x ananassa HOM05D007052 ORTHO05D008871 7.1e-13 78.6 44 81.8
MSTRG.7177 Avicennia marina HOM05D007052 ORTHO05D008871 8.7e-11 71.6 52 61.5
Nitab4.5_0007209g0010 Nicotiana tabacum HOM05D007052 ORTHO05D008871 3.7e-09 66.2 51 62.7
PRCOL_00003846 Prasinoderma coloniale HOM05D007052 ORTHO05D008871 6.3e-09 65.5 175 29.1
Cre01.g030350 Chlamydomonas reinhardtii HOM05D007052 ORTHO05D008871 4.1e-08 62.8 184 27.7


User provided reference genes

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