Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p071877 Quercus lobata HOM05D008262 ORTHO05D010389 8.0e-72 273.9 160 100.0
Cfa000160 Carpinus fangiana HOM05D008262 ORTHO05D010389 6.8e-47 191.0 168 70.2
Haze_06858 Corylus avellana HOM05D008262 ORTHO05D010389 1.1e-39 167.2 153 68.6
Dinv20108 Davidia involucrata HOM05D008262 ORTHO05D010389 8.7e-34 147.5 165 56.4
GSVIVG01004813001 Vitis vinifera HOM05D008262 ORTHO05D010389 7.3e-33 144.4 163 58.9
CiPaw.09G098200 Carya illinoinensis HOM05D008262 ORTHO05D010389 2.8e-32 142.5 170 59.4
Hma1.2p1_1358F.1_g278000 Hydrangea macrophylla HOM05D008262 ORTHO05D010389 3.6e-32 142.1 164 54.3
Thecc.06G228300 Theobroma cacao HOM05D008262 ORTHO05D010389 1.4e-31 140.2 167 54.5
GSVIVG01004816001 Vitis vinifera HOM05D008262 ORTHO05D010389 3.8e-29 132.1 156 57.7
Gohir.D06G157400 Gossypium hirsutum HOM05D008262 ORTHO05D010389 1.1e-28 130.6 166 50.6
MD10G1326900 Malus domestica HOM05D008262 ORTHO05D010389 1.1e-28 130.6 167 55.1
Duzib160G0751 Durio zibethinus HOM05D008262 ORTHO05D010389 5.4e-28 128.3 165 50.9
Potri.004G004100 Populus trichocarpa HOM05D008262 ORTHO05D010389 9.3e-28 127.5 161 51.6
Prupe.4G015100 Prunus persica HOM05D008262 ORTHO05D010389 1.2e-27 127.1 174 54.0
Actinidia39261 Actinidia chinensis HOM05D008262 ORTHO05D010389 1.6e-27 126.7 160 53.1
Gorai.010G183900 Gossypium raimondii HOM05D008262 ORTHO05D010389 2.1e-27 126.3 166 49.4
Potri.006G270200 Populus trichocarpa HOM05D008262 ORTHO05D010389 1.3e-26 123.6 163 54.0
Potri.011G011400 Populus trichocarpa HOM05D008262 ORTHO05D010389 1.3e-26 123.6 163 54.0
CANSAT56G3510 Cannabis sativa HOM05D008262 ORTHO05D010389 1.8e-26 123.2 173 50.3
CANSAT56G4204 Cannabis sativa HOM05D008262 ORTHO05D010389 1.8e-26 123.2 173 50.3
Gohir.A06G151200 Gossypium hirsutum HOM05D008262 ORTHO05D010389 3.9e-26 122.1 166 48.2
TAR626G1083 Trochodendron aralioides HOM05D008262 ORTHO05D010389 4.3e-25 118.6 161 52.2
Ciclev10017034m.g Citrus clementina HOM05D008262 ORTHO05D010389 1.2e-22 110.5 160 48.8
RcHm_v2.0_Chr5g0002091 Rosa chinensis HOM05D008262 ORTHO05D010389 5.8e-22 108.2 169 49.1
Sabra11G0011600 Salix brachista HOM05D001288 ORTHO05D010389 1.7e-21 106.7 156 51.3
Sed0027045 Sechium edule HOM05D008262 ORTHO05D010389 2.9e-21 105.9 161 44.7
vmacro15804 Vaccinium macrocarpon HOM05D008262 ORTHO05D010389 3.8e-21 105.5 163 46.6
ClCG01G021670 Citrullus lanatus HOM05D008262 ORTHO05D010389 2.1e-19 99.8 173 45.7
PSO832G2202 Papaver somniferum HOM05D008262 ORTHO05D010389 3.5e-19 99.0 152 47.4
PSO210G6064 Papaver somniferum HOM05D008262 ORTHO05D010389 1.3e-18 97.1 152 45.4
Rhsim02G0104900 Rhododendron simsii HOM05D008262 ORTHO05D010389 1.8e-18 96.7 164 42.1
FAN08G2823 Fragaria x ananassa HOM05D008262 ORTHO05D010389 2.3e-18 96.3 135 49.6
Sabra11G0010100 Salix brachista HOM05D008262 ORTHO05D010389 1.9e-17 93.2 153 48.4
CsaV3_6G048720 Cucumis sativus L. HOM05D008262 ORTHO05D010389 2.5e-17 92.8 169 44.4
FAN04G2856 Fragaria x ananassa HOM05D008262 ORTHO05D010389 2.8e-16 89.4 134 47.8
Nn1g07277 Nelumbo nucifera HOM05D008262 ORTHO05D010389 2.8e-16 89.4 170 44.1
Cpa.g.c34179.2 Carica papaya HOM05D008262 ORTHO05D010389 4.0e-15 85.5 125 45.6
FvH4_5g10500 Fragaria vesca HOM05D008262 ORTHO05D010389 2.0e-14 83.2 138 44.9
FAN13G3130 Fragaria x ananassa HOM05D008262 ORTHO05D010389 3.4e-14 82.4 136 46.3
FAN18G3649 Fragaria x ananassa HOM05D008262 ORTHO05D010389 3.4e-14 82.4 138 44.9
MELO3C007418.2 Cucumis melo HOM05D008262 ORTHO05D010389 4.5e-14 82.0 170 41.8
Lsat_1_v5_gn_7_14921 Lactuca sativa HOM05D008262 ORTHO05D010389 7.1e-12 74.7 116 48.3
Eucgr.E03985 Eucalyptus grandis HOM05D008262 ORTHO05D010389 3.9e-10 68.9 165 37.0
A01p13510 Brassica napus HOM05D008262 ORTHO05D010389 5.7e-09 65.1 131 42.0
BraA01t01292Z Brassica rapa HOM05D008262 ORTHO05D010389 5.7e-09 65.1 131 42.0
C01p16340 Brassica napus HOM05D008262 ORTHO05D010389 1.3e-08 63.9 131 41.2
BolC1t01585H Brassica oleracea HOM05D008262 ORTHO05D010389 1.3e-08 63.9 131 41.2
AL7G31530 Arabidopsis lyrata HOM05D008262 ORTHO05D010389 1.6e-08 63.5 139 38.8
BcaNung03758 Brassica carinata HOM05D008262 ORTHO05D010389 3.7e-08 62.4 138 43.5
AT4G22160 Arabidopsis thaliana HOM05D008262 ORTHO05D010389 6.9e-07 58.2 137 36.5
Sp7g20320 Schrenkiella parvula HOM05D008262 ORTHO05D010389 2.0e-06 56.6 142 40.1
CARHR228990 Cardamine hirsuta HOM05D008262 ORTHO05D010389 3.4e-06 55.8 127 44.9
HanXRQChr15g0470801 Helianthus annuus HOM05D008262 ORTHO05D010389 4.5e-06 55.5 95 42.1
BcaC09g51156 Brassica carinata HOM05D008262 ORTHO05D010389 1.0e-05 54.3 84 44.0


User provided reference genes

Program Settings