Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p070921 Quercus lobata HOM05D000097 ORTHO05D000041 9.9e-87 323.6 180 100.0
QL05p071327 Quercus lobata HOM05D000097 ORTHO05D000041 6.7e-43 177.9 135 69.6
QL05p034733 Quercus lobata HOM05D000097 ORTHO05D000041 7.2e-37 157.9 136 65.4
Cfa000150 Carpinus fangiana HOM05D000097 ORTHO05D000041 9.8e-34 147.5 148 58.8
Haze_06869 Corylus avellana HOM05D000097 ORTHO05D000041 2.8e-33 146.0 160 64.4
QL05p070833 Quercus lobata HOM05D000097 ORTHO05D000041 1.0e-30 137.5 148 52.7
Haze_06873 Corylus avellana HOM05D000097 ORTHO05D000041 3.8e-30 135.6 166 51.2
QL05p070510 Quercus lobata HOM05D000097 ORTHO05D000041 6.5e-30 134.8 137 56.2
QL05p070873 Quercus lobata HOM05D000097 ORTHO05D000041 6.5e-30 134.8 137 56.2
Cfa000149 Carpinus fangiana HOM05D000097 ORTHO05D000041 8.6e-30 134.4 136 55.1
Haze_06875 Corylus avellana HOM05D000097 ORTHO05D000041 8.8e-27 124.4 148 56.8
CiPaw.10G075200 Carya illinoinensis HOM05D000097 ORTHO05D000041 1.2e-26 124.0 140 52.1
QL05p070490 Quercus lobata HOM05D000097 ORTHO05D000041 2.6e-26 122.9 136 51.5
Ciclev10029847m.g Citrus clementina HOM05D000097 ORTHO05D000041 5.4e-24 115.2 139 47.5
CiPaw.09G099300 Carya illinoinensis HOM05D000097 ORTHO05D000041 1.2e-23 114.0 141 46.1
Ciclev10028400m.g Citrus clementina HOM05D000097 ORTHO05D000041 2.0e-23 113.2 139 47.5
Cfa000147 Carpinus fangiana HOM05D000097 ORTHO05D000041 3.5e-23 112.5 142 47.9
Manes.15G116900 Manihot esculenta HOM05D000097 ORTHO05D000041 3.5e-23 112.5 148 43.2
Cfa000152 Carpinus fangiana HOM05D000097 ORTHO05D000041 4.5e-23 112.1 140 47.9
Ciclev10030399m.g Citrus clementina HOM05D000097 ORTHO05D000041 4.5e-23 112.1 133 46.6
CiPaw.09G099000 Carya illinoinensis HOM05D000097 ORTHO05D000041 1.3e-22 110.5 135 45.2
CiPaw.09G099200 Carya illinoinensis HOM05D000097 ORTHO05D000041 1.7e-22 110.2 136 49.3
Potri.006G281600 Populus trichocarpa HOM05D000097 ORTHO05D000041 1.7e-22 110.2 132 44.7
Potri.011G016300 Populus trichocarpa HOM05D000097 ORTHO05D000041 1.7e-22 110.2 132 44.7
Potri.011G015801 Populus trichocarpa HOM05D000097 ORTHO05D000041 2.3e-22 109.8 132 44.7
Potri.006G281700 Populus trichocarpa HOM05D000097 ORTHO05D000041 1.1e-21 107.5 148 40.5
Potri.011G016200 Populus trichocarpa HOM05D000097 ORTHO05D000041 1.1e-21 107.5 148 40.5
Cfa000912 Carpinus fangiana HOM05D000097 ORTHO05D000041 2.5e-21 106.3 131 46.6
QL05p071177 Quercus lobata HOM05D000097 ORTHO05D000041 2.5e-21 106.3 136 44.9
Rhsim06G0147500 Rhododendron simsii HOM05D000097 ORTHO05D000041 3.3e-21 105.9 132 47.0
vmacro12236 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 4.3e-21 105.5 134 47.0
Potri.011G016100 Populus trichocarpa HOM05D000097 ORTHO05D000041 5.6e-21 105.1 132 44.7
QL05p071436 Quercus lobata HOM05D000097 ORTHO05D000041 7.3e-21 104.8 136 44.9
QL05p070420 Quercus lobata HOM05D000097 ORTHO05D000041 9.5e-21 104.4 107 57.9
Dinv20111 Davidia involucrata HOM05D000097 ORTHO05D000041 1.2e-20 104.0 130 56.2
Dinv20112 Davidia involucrata HOM05D000097 ORTHO05D000041 1.2e-20 104.0 161 43.5
Potri.006G281800 Populus trichocarpa HOM05D000097 ORTHO05D000041 1.6e-20 103.6 132 43.9
QL05p071478 Quercus lobata HOM05D000097 ORTHO05D000041 1.6e-20 103.6 136 43.4
Dinv13946 Davidia involucrata HOM05D000097 ORTHO05D000041 2.1e-20 103.2 140 45.0
CSS0005780 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D000041 2.8e-20 102.8 134 44.0
CSS0026601 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D000041 6.1e-20 101.7 139 43.2
Rhsim06G0147800 Rhododendron simsii HOM05D000097 ORTHO05D000041 6.1e-20 101.7 132 45.5
Rhsim06G0147700 Rhododendron simsii HOM05D000097 ORTHO05D000041 1.8e-19 100.1 132 45.5
vmacro12277 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 2.3e-19 99.8 132 43.9
Lsat_1_v5_gn_4_61781 Lactuca sativa HOM05D000097 ORTHO05D000041 3.0e-19 99.4 138 44.9
Dinv13944 Davidia involucrata HOM05D000097 ORTHO05D000041 4.0e-19 99.0 133 43.6
CSS0025841 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D000041 5.2e-19 98.6 127 44.1
CSS0041661 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D000041 1.2e-18 97.4 129 44.2
QL05p071390 Quercus lobata HOM05D000097 ORTHO05D000041 1.2e-18 97.4 126 44.4
GSVIVG01005100001 Vitis vinifera HOM05D000097 ORTHO05D000041 1.2e-18 97.4 135 41.5
PGSC0003DMG400023040 Solanum tuberosum HOM05D000097 ORTHO05D000041 4.4e-18 95.5 133 42.1
Dinv13945 Davidia involucrata HOM05D000097 ORTHO05D000041 5.7e-18 95.1 137 43.1
ECA234G2414 Erigeron canadensis HOM05D000097 ORTHO05D000041 7.5e-18 94.7 130 43.8
Ciclev10030033m.g Citrus clementina HOM05D000097 ORTHO05D000041 1.3e-17 94.0 134 41.8
Dinv23672 Davidia involucrata HOM05D000097 ORTHO05D000041 2.2e-17 93.2 131 42.0
Sopen05g013970 Solanum pennellii HOM05D000097 ORTHO05D000041 2.2e-17 93.2 134 40.3
Haze_06865 Corylus avellana HOM05D000097 ORTHO05D000041 2.9e-17 92.8 139 38.1
Lsat_1_v5_gn_4_61881 Lactuca sativa HOM05D000097 ORTHO05D000041 3.7e-17 92.4 136 38.2
HanXRQChr17g0558831 Helianthus annuus HOM05D000097 ORTHO05D000041 4.9e-17 92.0 139 38.1
Hma1.2p1_0875F.1_g231350 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 4.9e-17 92.0 129 41.1
Dinv23674 Davidia involucrata HOM05D000097 ORTHO05D000041 6.4e-17 91.7 129 38.8
Rhsim06G0148000 Rhododendron simsii HOM05D000097 ORTHO05D000041 8.3e-17 91.3 107 47.7
GSVIVG01028837001 Vitis vinifera HOM05D000097 ORTHO05D000041 1.8e-16 90.1 131 38.2
Hma1.2p1_1475F.1_g285780 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 2.4e-16 89.7 135 40.0
AUR62031540 Chenopodium quinoa HOM05D000097 ORTHO05D000041 3.2e-16 89.4 135 37.0
AUR62012416 Chenopodium quinoa HOM05D000097 ORTHO05D000041 4.1e-16 89.0 135 37.0
Hma1.2p1_0875F.1_g231340 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 4.1e-16 89.0 129 38.8
Lsat_1_v5_gn_7_14780 Lactuca sativa HOM05D000097 ORTHO05D000041 4.1e-16 89.0 131 40.5
Lsat_1_v5_gn_7_14820 Lactuca sativa HOM05D000097 ORTHO05D000041 4.1e-16 89.0 131 40.5
QL05p070608 Quercus lobata HOM05D000097 ORTHO05D000041 4.1e-16 89.0 78 64.1
Dinv23668 Davidia involucrata HOM05D000097 ORTHO05D000041 5.4e-16 88.6 127 40.9
Lsat_1_v5_gn_7_14680 Lactuca sativa HOM05D000097 ORTHO05D000041 9.2e-16 87.8 130 40.0
DCAR_001142 Daucus carota HOM05D000097 ORTHO05D000041 1.2e-15 87.4 136 41.2
HanXRQChr17g0558921 Helianthus annuus HOM05D000097 ORTHO05D000041 1.2e-15 87.4 141 41.1
ECA234G0931 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.7e-15 86.3 132 37.9
HanXRQChr17g0558911 Helianthus annuus HOM05D000097 ORTHO05D000041 3.5e-15 85.9 139 36.7
Hma1.2p1_1176F.1_g264290 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 3.5e-15 85.9 129 37.2
Lsat_1_v5_gn_7_15241 Lactuca sativa HOM05D000097 ORTHO05D000041 1.3e-14 84.0 130 37.7
vmacro12272 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 1.3e-14 84.0 131 38.2
ECA248G1433 Erigeron canadensis HOM05D000097 ORTHO05D000041 2.3e-14 83.2 135 40.0
Ah.16g104570 Amaranthus hybridus HOM05D000097 ORTHO05D000041 3.9e-14 82.4 134 35.8
ECA246G4976 Erigeron canadensis HOM05D000097 ORTHO05D000041 3.9e-14 82.4 132 35.6
Lsat_1_v5_gn_7_14740 Lactuca sativa HOM05D000097 ORTHO05D000041 6.6e-14 81.6 132 37.9
GSVIVG01012268001 Vitis vinifera HOM05D000097 ORTHO05D000041 2.5e-13 79.7 138 32.6
DCAR_027551 Daucus carota HOM05D000097 ORTHO05D000041 4.3e-13 79.0 127 37.0
Dinv23673 Davidia involucrata HOM05D000097 ORTHO05D000041 7.3e-13 78.2 140 37.9
Rhsim06G0147300 Rhododendron simsii HOM05D000097 ORTHO05D000041 1.2e-12 77.4 127 37.0
TAR627G0755 Trochodendron aralioides HOM05D000097 ORTHO05D000041 1.6e-12 77.0 128 36.7
Dinv13948 Davidia involucrata HOM05D000097 ORTHO05D000041 3.6e-12 75.9 129 37.2
HanXRQChr14g0433251 Helianthus annuus HOM05D000097 ORTHO05D000041 8.0e-12 74.7 135 37.8
vmacro12278 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 1.1e-11 74.3 134 37.3
Potri.011G015725 Populus trichocarpa HOM05D000097 ORTHO05D000041 4.0e-11 72.4 96 37.5
Atru.chr10.2324 Acer truncatum HOM05D000097 ORTHO05D000041 2.6e-10 69.7 132 34.1
Haze_06867 Corylus avellana HOM05D000097 ORTHO05D000041 5.8e-10 68.6 139 31.7
Ciclev10030237m.g Citrus clementina HOM05D000097 ORTHO05D000041 9.8e-10 67.8 86 41.9
Atru.chr10.2319 Acer truncatum HOM05D000097 ORTHO05D000041 4.9e-09 65.5 136 30.9
Duzib235G0681 Durio zibethinus HOM05D000097 ORTHO05D000041 6.4e-09 65.1 154 27.3
CiPaw.10G075100 Carya illinoinensis HOM05D000097 ORTHO05D000041 1.1e-08 64.3 144 30.6
Gorai.010G184500 Gossypium raimondii HOM05D000097 ORTHO05D000041 1.9e-08 63.5 137 32.8
Atru.chr10.2322 Acer truncatum HOM05D000097 ORTHO05D000041 4.1e-08 62.4 134 32.8
COL.COLO4_31842 Corchorus olitorius HOM05D000097 ORTHO05D000041 4.1e-08 62.4 135 27.4
Cfa000146 Carpinus fangiana HOM05D000097 ORTHO05D000041 7.0e-08 61.6 123 32.5
EL10Ac3g06765 Beta vulgaris HOM05D000097 ORTHO05D000041 9.2e-08 61.2 119 32.8
QL05p071163 Quercus lobata HOM05D000097 ORTHO05D000041 9.2e-08 61.2 93 41.9
CiPaw.10G075000 Carya illinoinensis HOM05D000097 ORTHO05D000041 1.2e-07 60.8 144 29.9
EL10Ac3g06766 Beta vulgaris HOM05D000097 ORTHO05D000041 3.5e-07 59.3 125 31.2
DCAR_009741 Daucus carota HOM05D000097 ORTHO05D000041 3.5e-07 59.3 135 32.6
Thecc.06G229300 Theobroma cacao HOM05D000097 ORTHO05D000041 3.5e-07 59.3 142 25.4
Aqoxy1G02931 Aquilegia oxysepala HOM05D000097 ORTHO05D000041 4.6e-07 58.9 144 32.6
QL05p070665 Quercus lobata HOM05D000097 ORTHO05D000041 6.0e-07 58.5 61 44.3
Gohir.D06G158000 Gossypium hirsutum HOM05D000097 ORTHO05D000041 1.0e-06 57.8 149 28.2
Gohir.D10G010400 Gossypium hirsutum HOM05D000097 ORTHO05D000041 1.0e-06 57.8 152 27.0
QL05p070576 Quercus lobata HOM05D000097 ORTHO05D000041 1.0e-06 57.8 54 59.3
DCAR_009740 Daucus carota HOM05D000097 ORTHO05D000041 2.3e-06 56.6 133 30.8
Atru.chr10.2320 Acer truncatum HOM05D000097 ORTHO05D000041 3.9e-06 55.8 109 31.2
AUR62031538 Chenopodium quinoa HOM05D000097 ORTHO05D000041 3.9e-06 55.8 145 27.6
Gohir.A10G010700 Gossypium hirsutum HOM05D000097 ORTHO05D000041 3.9e-06 55.8 153 27.5
Dinv23670 Davidia involucrata HOM05D000097 ORTHO05D000041 5.0e-06 55.5 89 42.7
Duzib235G1060 Durio zibethinus HOM05D000097 ORTHO05D000041 5.0e-06 55.5 163 27.0


User provided reference genes

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