Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p069683 Quercus lobata HOM05D007192 ORTHO05D009034 1.2e-104 383.3 211 100.0
Haze_08662 Corylus avellana HOM05D007192 ORTHO05D009034 6.9e-71 271.2 210 76.7
CiPaw.09G102500 Carya illinoinensis HOM05D007192 ORTHO05D009034 6.2e-64 248.1 210 65.7
Dinv07405 Davidia involucrata HOM05D007192 ORTHO05D009034 1.7e-61 240.0 215 63.3
Hma1.2p1_0657F.1_g197140 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 3.8e-61 238.8 211 64.0
Prupe.4G010200 Prunus persica HOM05D007192 ORTHO05D009034 3.5e-59 232.3 211 68.2
Thecc.06G233600 Theobroma cacao HOM05D007192 ORTHO05D009034 4.6e-59 231.9 212 68.9
Dinv13967 Davidia involucrata HOM05D001152 ORTHO05D000967 7.9e-59 231.1 207 63.3
Atru.chr1.2446 Acer truncatum HOM05D007192 ORTHO05D009034 2.3e-58 229.6 212 69.3
MD10G1331900 Malus domestica HOM05D007192 ORTHO05D009034 6.7e-58 228.0 211 67.8
GSVIVG01003334001 Vitis vinifera HOM05D007192 ORTHO05D009034 2.5e-57 226.1 210 67.6
TWI38G0802 Tripterygium wilfordii HOM05D007192 ORTHO05D009034 3.3e-57 225.7 212 66.5
Phvul.003G083700 Phaseolus vulgaris HOM05D007192 ORTHO05D009034 9.6e-57 224.2 212 64.2
MD05G1358000 Malus domestica HOM05D007192 ORTHO05D009034 1.6e-56 223.4 214 65.9
Nn1g07392 Nelumbo nucifera HOM05D007192 ORTHO05D009034 2.4e-55 219.5 213 62.9
TAR629G2173 Trochodendron aralioides HOM05D007192 ORTHO05D009034 2.4e-55 219.5 213 62.0
Gohir.D06G216300 Gossypium hirsutum HOM05D007192 ORTHO05D009034 5.3e-55 218.4 212 65.1
Gorai.010G249900 Gossypium raimondii HOM05D007192 ORTHO05D009034 5.3e-55 218.4 212 65.1
Gohir.A06G205200 Gossypium hirsutum HOM05D007192 ORTHO05D009034 1.2e-54 217.2 212 64.6
Duzib235G0907 Durio zibethinus HOM05D007192 ORTHO05D009034 2.0e-54 216.5 220 61.4
Lj4g0002454 Lotus japonicus HOM05D007192 ORTHO05D009034 4.5e-54 215.3 212 62.7
Hma1.2p1_0657F.1_g197150 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 1.0e-53 214.2 267 50.9
RcHm_v2.0_Chr5g0001481 Rosa chinensis HOM05D007192 ORTHO05D009034 1.0e-53 214.2 212 60.8
Glyma.07G265300 Glycine max HOM05D007192 ORTHO05D009034 1.7e-53 213.4 212 61.3
Potri.016G013500 Populus trichocarpa HOM05D007192 ORTHO05D009034 2.9e-53 212.6 212 62.3
Eucgr.E03926 Eucalyptus grandis HOM05D007192 ORTHO05D009034 3.8e-53 212.2 170 72.9
CANSAT56G2005 Cannabis sativa HOM05D007192 ORTHO05D009034 8.4e-53 211.1 213 64.3
FvH4_3g00960 Fragaria vesca HOM05D007192 ORTHO05D009034 4.2e-52 208.8 212 59.4
Sabra06G0008700 Salix brachista HOM05D007192 ORTHO05D009034 9.3e-52 207.6 194 65.5
Ciclev10016735m.g Citrus clementina HOM05D007192 ORTHO05D009034 2.7e-51 206.1 212 64.2
PGR042G3283 Punica granatum HOM05D007192 ORTHO05D009034 6.0e-51 204.9 211 58.8
Glyma.17G008700 Glycine max HOM05D007192 ORTHO05D009034 7.9e-51 204.5 210 61.4
Cfa000100 Carpinus fangiana HOM05D007192 ORTHO05D009034 3.9e-50 202.2 146 81.5
Sed0016386 Sechium edule HOM05D007192 ORTHO05D009034 5.1e-50 201.8 212 59.9
CsaV3_6G048500 Cucumis sativus L. HOM05D007192 ORTHO05D009034 3.3e-49 199.1 213 63.4
ClCG01G021480 Citrullus lanatus HOM05D007192 ORTHO05D009034 2.1e-48 196.4 217 57.6
Aqoxy2G00603 Aquilegia oxysepala HOM05D007192 ORTHO05D009034 9.0e-47 191.0 216 54.2
arahy.Tifrunner.gnm1.ann1.E8J80R Arachis hypogaea HOM05D007192 ORTHO05D009034 1.5e-46 190.3 212 57.1
THA.LOC104799643 Tarenaya hassleriana HOM05D007192 ORTHO05D009034 1.7e-45 186.8 181 63.0
MELO3C007436.2 Cucumis melo HOM05D007192 ORTHO05D009034 2.2e-45 186.4 212 56.1
Oeu016820.1 Olea europaea HOM05D007192 ORTHO05D009034 6.5e-45 184.9 223 52.9
PSO541G1889 Papaver somniferum HOM05D007192 ORTHO05D009034 6.5e-45 184.9 220 57.7
PSO675G6515 Papaver somniferum HOM05D007192 ORTHO05D009034 1.4e-44 183.7 222 58.1
Medtr4g133070 Medicago truncatula HOM05D007192 ORTHO05D009034 7.1e-44 181.4 186 61.8
SalBow8G5140 Salvia bowleyana HOM05D007192 ORTHO05D009034 1.0e-42 177.6 173 57.8
TPR.G37116 Trifolium pratense HOM05D007192 ORTHO05D009034 1.0e-42 177.6 198 58.1
MSTRG.14611 Avicennia marina HOM05D007192 ORTHO05D009034 3.0e-42 176.0 187 53.5
Cc09_g00850 Coffea canephora HOM05D007192 ORTHO05D009034 6.7e-42 174.9 217 55.8
PGSC0003DMG400013349 Solanum tuberosum HOM05D007192 ORTHO05D009034 6.7e-42 174.9 213 51.2
Nitab4.5_0000143g0180 Nicotiana tabacum HOM05D007192 ORTHO05D009034 1.1e-41 174.1 213 52.6
Solyc11g012280.2 Solanum lycopersicum HOM05D007192 ORTHO05D009034 4.3e-41 172.2 215 50.7
Sopen11g007060 Solanum pennellii HOM05D007192 ORTHO05D009034 2.2e-40 169.9 213 50.7
Ah.14g087620 Amaranthus hybridus HOM05D007192 ORTHO05D009034 2.8e-40 169.5 211 54.5
Sc24g0000280 Simmondsia chinensis HOM05D007192 ORTHO05D009034 8.2e-40 167.9 158 66.5
Nitab4.5_0011595g0010 Nicotiana tabacum HOM05D007192 ORTHO05D009034 1.8e-39 166.8 213 50.7
Peaxi162Scf00352g00210 Petunia axillaris HOM05D007192 ORTHO05D009034 4.1e-39 165.6 212 50.0
Actinidia26860 Actinidia chinensis HOM05D007192 ORTHO05D009034 5.3e-39 165.2 166 63.9
HanXRQChr10g0285171 Helianthus annuus HOM05D007192 ORTHO05D009034 6.9e-39 164.9 210 48.1
FAN21G0227 Fragaria x ananassa HOM05D007192 ORTHO05D009034 1.2e-38 164.1 146 64.4
Sp6g24270 Schrenkiella parvula HOM05D007192 ORTHO05D009034 2.6e-38 162.9 175 57.1
CDE08G0359 Ceratophyllum demersum HOM05D007192 ORTHO05D009034 3.4e-38 162.5 215 52.6
VMungo1215G1962 Vigna mungo HOM05D007192 ORTHO05D009034 4.5e-38 162.2 147 66.0
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 7.7e-38 161.4 167 56.3
Lalb_Chr07g0176981 Lupinus albus HOM05D007192 ORTHO05D009034 1.7e-37 160.2 175 54.3
Duzib192G0317 Durio zibethinus HOM05D007192 ORTHO05D009034 1.4e-36 157.1 149 58.4
Hund23406 Selenicereus undatus HOM05D007192 ORTHO05D009034 2.5e-36 156.4 213 51.6
Manes.09G076800 Manihot esculenta HOM05D007192 ORTHO05D009034 6.1e-35 151.8 184 58.7
CARHR192700 Cardamine hirsuta HOM05D007192 ORTHO05D009034 2.3e-34 149.8 176 55.7
BcaB05g22869 Brassica carinata HOM05D007192 ORTHO05D009034 6.7e-34 148.3 174 54.0
Thhalv10014703m.g Eutrema salsugineum HOM05D007192 ORTHO05D009034 8.8e-34 147.9 173 55.5
Lsat_1_v5_gn_0_23500 Lactuca sativa HOM05D007192 ORTHO05D009034 1.3e-32 144.1 213 46.5
AT5G20130 Arabidopsis thaliana HOM05D007192 ORTHO05D009034 1.7e-32 143.7 172 55.2
DCAR_004888 Daucus carota HOM05D007192 ORTHO05D009034 2.8e-32 142.9 211 51.7
ATR0776G058 Amborella trichopoda HOM05D007192 ORTHO05D009034 4.8e-32 142.1 206 48.1
C03p11420 Brassica napus HOM05D007192 ORTHO05D009034 4.8e-32 142.1 163 56.4
BcaC03g13735 Brassica carinata HOM05D007192 ORTHO05D009034 1.1e-31 141.0 173 55.5
BolC2t07017H Brassica oleracea HOM05D007192 ORTHO05D009034 1.1e-31 141.0 173 55.5
HPP92_000005 Vanilla planifolia HOM05D007192 ORTHO05D009034 4.1e-31 139.0 178 44.9
A03p09840 Brassica napus HOM05D007192 ORTHO05D009034 9.1e-31 137.9 162 55.6
BraA03t10299Z Brassica rapa HOM05D007192 ORTHO05D009034 9.1e-31 137.9 162 55.6
Psat4g005120 Pisum sativum HOM05D007192 ORTHO05D009034 9.1e-31 137.9 169 55.6
Aa31LG2G11450 Aethionema arabicum HOM05D007192 ORTHO05D009034 1.2e-30 137.5 148 58.8
BNapus_Darmor_BZH_scaffold_38p01780 Brassica napus HOM05D007192 ORTHO05D009034 1.2e-30 137.5 192 51.6
BraA02t05557Z Brassica rapa HOM05D007192 ORTHO05D009034 1.2e-30 137.5 192 51.6
Carub.0006s1851 Capsella rubella HOM05D007192 ORTHO05D009034 2.6e-30 136.3 216 49.1
CAN.G1186.41 Capsicum annuum HOM05D007192 ORTHO05D009034 3.4e-30 136.0 149 55.0
AL6G31680 Arabidopsis lyrata HOM05D007192 ORTHO05D009034 4.5e-30 135.6 205 49.3
unitig_37.g12189 Utricularia gibba HOM05D007192 ORTHO05D009034 4.5e-30 135.6 216 41.7
Rhsim02G0145900 Rhododendron simsii HOM05D007192 ORTHO05D009034 3.8e-29 132.5 212 43.4
ECA248G2945 Erigeron canadensis HOM05D007192 ORTHO05D009034 6.5e-29 131.7 184 50.5
Potri.006G010600 Populus trichocarpa HOM05D007192 ORTHO05D009034 8.5e-29 131.3 125 67.2
FAN25G1082 Fragaria x ananassa HOM05D007192 ORTHO05D009034 4.2e-28 129.0 124 62.9
Migut.M01397 Erythranthe guttata HOM05D007192 ORTHO05D009034 8.8e-26 121.3 142 57.0
vmacro03641 Vaccinium macrocarpon HOM05D007192 ORTHO05D009034 6.3e-24 115.2 151 44.4
Lj2A261T34 Lonicera japonica HOM05D007192 ORTHO05D009034 2.0e-22 110.2 158 50.0
EL10Ac8g20192 Beta vulgaris HOM05D007192 ORTHO05D009034 4.5e-22 109.0 131 58.8
COL.COLO4_31887 Corchorus olitorius HOM05D007192 ORTHO05D009034 7.7e-22 108.2 211 37.9
BcaB01g04802 Brassica carinata HOM05D007192 ORTHO05D009034 7.2e-20 101.7 96 52.1
BolC3t13616H Brassica oleracea HOM05D007192 ORTHO05D009034 7.2e-20 101.7 96 52.1
BcaB01g04801 Brassica carinata HOM05D007192 ORTHO05D009034 3.0e-18 96.3 160 38.8
SGA_v2.0_scaffold4G01874 Striga asiatica HOM05D007192 ORTHO05D009034 8.8e-18 94.7 143 50.3
SEGI_14587 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 8.2e-16 88.2 188 41.5
Pp3c14_17130 Physcomitrium patens HOM05D007192 ORTHO05D009034 2.0e-14 83.6 227 35.7
SEGI_15910 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 1.7e-13 80.5 150 46.7
AUR62021857 Chenopodium quinoa HOM05D007192 ORTHO05D009034 1.4e-10 70.9 211 28.0
Mapoly0007s0283 Marchantia polymorpha HOM05D007192 ORTHO05D009034 4.8e-08 62.4 180 39.4
Mapoly0252s0005 Marchantia polymorpha HOM05D007192 ORTHO05D009034 4.8e-08 62.4 180 39.4
AagrBONN_evm.TU.Sc2ySwM_362.1438 Anthoceros agrestis HOM05D007192 ORTHO05D009034 1.4e-07 60.8 133 42.9
GSVIVG01003341001 Vitis vinifera HOM05D007192 ORTHO05D009034 4.5e-06 55.8 65 49.2


User provided reference genes

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