Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p068133 Quercus lobata HOM05D011684 ORTHO05D011224 6.0e-91 337.4 163 100.0
Cfa000047 Carpinus fangiana HOM05D011684 ORTHO05D011224 5.9e-54 214.5 150 70.7
Haze_07006 Corylus avellana HOM05D011684 ORTHO05D011224 1.0e-53 213.8 151 68.9
Prupe.4G005300 Prunus persica HOM05D011684 ORTHO05D011224 2.4e-39 166.0 150 57.3
Potri.006G018200 Populus trichocarpa HOM05D011684 ORTHO05D011224 5.9e-38 161.4 149 56.4
CiPaw.09G107800 Carya illinoinensis HOM05D011684 ORTHO05D011224 8.0e-35 151.0 150 54.7
Sabra06G0013200 Salix brachista HOM05D011684 ORTHO05D011224 2.0e-33 146.4 157 49.7
RcHm_v2.0_Chr5g0000641 Rosa chinensis HOM05D011684 ORTHO05D011224 2.2e-32 142.9 151 50.3
Cpa.g.sc27.244 Carica papaya HOM05D011684 ORTHO05D011224 4.1e-31 138.7 149 47.0
FvH4_3g00481 Fragaria vesca HOM05D011684 ORTHO05D011224 9.1e-31 137.5 153 49.7
Thecc.06G238700 Theobroma cacao HOM05D011684 ORTHO05D011224 1.0e-29 134.0 134 52.2
FAN21G3814 Fragaria x ananassa HOM05D002244 ORTHO05D002269 1.3e-29 133.7 151 49.0
FAN25G0603 Fragaria x ananassa HOM05D011684 ORTHO05D011224 9.5e-28 127.5 151 47.7
FAN25G1760 Fragaria x ananassa HOM05D002244 ORTHO05D002269 3.6e-27 125.6 151 47.0
Sabra16G0011700 Salix brachista HOM05D011684 ORTHO05D011224 1.8e-23 113.2 130 47.7
Lsat_1_v5_gn_4_63581 Lactuca sativa HOM05D002244 ORTHO05D002269 7.8e-22 107.8 150 42.7
Atru.chr1.2295 Acer truncatum HOM05D011684 ORTHO05D011224 3.2e-15 85.9 73 52.1
ECA234G3997 Erigeron canadensis HOM05D011684 ORTHO05D011224 2.0e-14 83.2 148 36.5
Glyma.09G013200 Glycine max HOM05D013456 ORTHO05D011224 1.7e-13 80.1 149 35.6
COL.COLO4_31926 Corchorus olitorius HOM05D027799 ORTHO05D011224 3.9e-13 79.0 149 39.6
Glyma.15G118051 Glycine max HOM05D013456 ORTHO05D011224 3.9e-13 79.0 151 36.4
Phvul.006G140200 Phaseolus vulgaris HOM05D013456 ORTHO05D011224 3.3e-12 75.9 151 34.4
FvH4_3g00440 Fragaria vesca HOM05D002244 ORTHO05D002269 8.0e-11 71.2 57 57.9
VMungo0540G0506 Vigna mungo HOM05D013456 ORTHO05D011224 1.4e-10 70.5 126 36.5
Psat1g174320 Pisum sativum HOM05D013456 ORTHO05D011224 6.8e-10 68.2 150 35.3
ClCG01G021280 Citrullus lanatus HOM05D029069 ORTHO05D011224 1.2e-09 67.4 162 29.0
Eucgr.E03881 Eucalyptus grandis HOM05D011684 ORTHO05D011224 1.2e-09 67.4 87 39.1
TPR.G10578 Trifolium pratense HOM05D013456 ORTHO05D011224 1.2e-09 67.4 151 33.1
CsaV3_6G048300 Cucumis sativus L. HOM05D029069 ORTHO05D011224 3.4e-09 65.9 161 30.4
Gohir.A05G175800 Gossypium hirsutum HOM05D027799 ORTHO05D011224 1.3e-08 63.9 151 34.4
Sed0018070 Sechium edule HOM05D029069 ORTHO05D011224 2.2e-08 63.2 151 31.1
arahy.Tifrunner.gnm1.ann1.LP2F40 Arachis hypogaea HOM05D013456 ORTHO05D011224 3.7e-08 62.4 149 31.5
arahy.Tifrunner.gnm1.ann1.PMB72Z Arachis hypogaea HOM05D013456 ORTHO05D011224 4.9e-08 62.0 149 31.5
Gohir.D05G178850 Gossypium hirsutum HOM05D027799 ORTHO05D011224 4.9e-08 62.0 151 33.8
Gorai.009G184300 Gossypium raimondii HOM05D027799 ORTHO05D011224 6.4e-08 61.6 151 34.4
PSO478G4364 Papaver somniferum HOM05D002916 ORTHO05D003152 2.7e-06 56.2 146 30.1
Sed0001048 Sechium edule HOM05D039430 ORTHO05D034713 3.5e-06 55.8 150 33.3
Lj6g0017788 Lotus japonicus HOM05D013456 ORTHO05D011224 4.6e-06 55.5 150 30.0
Medtr2g026595 Medicago truncatula HOM05D013456 ORTHO05D011224 4.6e-06 55.5 151 33.1
ClCG01G000110 Citrullus lanatus HOM05D002916 ORTHO05D003152 7.8e-06 54.7 154 28.6
ClCG01G010970 Citrullus lanatus HOM05D039430 ORTHO05D034713 7.8e-06 54.7 148 33.8


User provided reference genes

Program Settings