Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p066158 Quercus lobata HOM05D009025 ORTHO05D011227 1.9e-220 768.8 385 100.0
CiPaw.10G085100 Carya illinoinensis HOM05D009025 ORTHO05D011227 8.9e-109 397.9 408 55.9
CiPaw.09G113300 Carya illinoinensis HOM05D009025 ORTHO05D011227 1.6e-102 377.1 398 55.5
Potri.016G000700 Populus trichocarpa HOM05D009025 ORTHO05D011227 4.0e-69 266.2 399 43.1
Glyma.15G123700 Glycine max HOM05D009025 ORTHO05D011227 2.6e-68 263.5 393 44.8
Phvul.006G134300 Phaseolus vulgaris HOM05D009025 ORTHO05D011227 2.6e-68 263.5 402 45.0
VMungo0540G2122 Vigna mungo HOM05D009025 ORTHO05D011227 7.9e-65 251.9 390 42.8
Lj6g0011463 Lotus japonicus HOM05D009025 ORTHO05D011227 3.7e-62 243.0 394 44.2
Lalb_Chr20g0119741 Lupinus albus HOM05D009025 ORTHO05D011227 1.2e-60 238.0 390 42.1
TAR626G0549 Trochodendron aralioides HOM05D009025 ORTHO05D011227 4.2e-58 229.6 392 43.1
arahy.Tifrunner.gnm1.ann1.FQL4BN Arachis hypogaea HOM05D009025 ORTHO05D011227 1.9e-55 220.7 392 41.8
arahy.Tifrunner.gnm1.ann1.W10PR0 Arachis hypogaea HOM05D009025 ORTHO05D011227 5.6e-55 219.2 393 41.7
Glyma.09G017800 Glycine max HOM05D009025 ORTHO05D011227 2.0e-52 210.7 412 37.9
Medtr2g028180 Medicago truncatula HOM05D009025 ORTHO05D011227 3.4e-52 209.9 386 40.2
TPR.G10502 Trifolium pratense HOM05D009025 ORTHO05D011227 4.5e-52 209.5 390 40.5
Nn1g07628 Nelumbo nucifera HOM05D009025 ORTHO05D011227 5.8e-52 209.1 399 37.3
Ciclev10015726m.g Citrus clementina HOM05D009025 ORTHO05D011227 1.2e-49 201.4 381 39.1
CSS0008017 Camellia sinensis var. sinensis HOM05D009025 ORTHO05D011227 1.5e-44 184.5 402 36.1
Oeu016927.1 Olea europaea HOM05D009025 ORTHO05D011227 3.2e-42 176.8 388 35.1
Rhsim13G0137900 Rhododendron simsii HOM05D009025 ORTHO05D011227 8.8e-40 168.7 337 36.5
Haze_07066 Corylus avellana HOM05D009025 ORTHO05D011227 5.7e-39 166.0 257 47.9
Oeu017916.1 Olea europaea HOM05D009025 ORTHO05D011227 2.2e-38 164.1 394 34.0
Psat1g171120 Pisum sativum HOM05D009025 ORTHO05D011227 2.8e-38 163.7 378 34.4
Ca_00784_v3 Cicer arietinum L. HOM05D009025 ORTHO05D011227 3.1e-37 160.2 383 35.8
Ca_11375_v3 Cicer arietinum L. HOM05D009025 ORTHO05D011227 3.1e-37 160.2 383 35.8
DCAR_019912 Daucus carota HOM05D009025 ORTHO05D011227 3.2e-34 150.2 384 34.1
Lj2C12T17 Lonicera japonica HOM05D009025 ORTHO05D011227 1.8e-29 134.4 398 33.4
Migut.M01483 Erythranthe guttata HOM05D009025 ORTHO05D011227 1.7e-27 127.9 375 31.2
Aqoxy2G01997 Aquilegia oxysepala HOM05D009025 ORTHO05D011227 2.0e-23 114.4 428 28.0
Eucgr.E04236 Eucalyptus grandis HOM05D009025 ORTHO05D011227 2.7e-12 77.4 156 36.5
Os08g0499000 Oryza sativa ssp. japonica HOM05D009025 ORTHO05D011227 2.7e-12 77.4 182 30.8
ATR0751G165 Amborella trichopoda HOM05D009025 ORTHO05D011227 4.5e-12 76.6 394 25.1
SalBow8G5084 Salvia bowleyana HOM05D009025 ORTHO05D011227 1.3e-11 75.1 98 40.8
HPP92_022808 Vanilla planifolia HOM05D009025 ORTHO05D011227 1.3e-11 75.1 148 33.1
Zm00001eb199500 Zea mays HOM05D009025 ORTHO05D011227 6.5e-11 72.8 120 35.0
Atru.chr1.2205 Acer truncatum HOM05D009025 ORTHO05D011227 5.7e-07 59.7 192 31.8


User provided reference genes

Program Settings