Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p065797 Quercus lobata HOM05D000641 ORTHO05D007351 7.4e-146 520.8 313 100.0
QL05p066137 Quercus lobata HOM05D000641 ORTHO05D007351 3.7e-137 491.9 349 88.3
Haze_07064 Corylus avellana HOM05D000641 ORTHO05D007351 1.5e-45 187.6 365 48.5
Haze_19388 Corylus avellana HOM05D000641 ORTHO05D007351 5.8e-42 175.6 365 46.6
CiPaw.10G085300 Carya illinoinensis HOM05D000641 ORTHO05D007351 1.3e-36 157.9 362 40.9
Prupe.4G000100 Prunus persica HOM05D000641 ORTHO05D007351 1.5e-29 134.4 382 35.3
MD10G1342500 Malus domestica HOM05D000641 ORTHO05D007351 5.8e-26 122.5 337 35.6
RcHm_v2.0_Chr5g0000021 Rosa chinensis HOM05D000641 ORTHO05D007351 5.8e-26 122.5 341 36.7
Ciclev10014837m.g Citrus clementina HOM05D000641 ORTHO05D007351 5.1e-22 109.4 348 39.7
Manes.10G068200 Manihot esculenta HOM05D000641 ORTHO05D007351 3.3e-21 106.7 354 35.3
Phvul.006G134011 Phaseolus vulgaris HOM05D000641 ORTHO05D007351 1.1e-19 101.7 362 32.9
TWI63G1332 Tripterygium wilfordii HOM05D000641 ORTHO05D007351 4.1e-19 99.8 312 33.3
Thecc.06G244800 Theobroma cacao HOM05D000641 ORTHO05D007351 9.0e-19 98.6 335 33.4
VMungo0540G1063 Vigna mungo HOM05D000641 ORTHO05D007351 4.5e-18 96.3 329 32.5
arahy.Tifrunner.gnm1.ann1.J86N0J Arachis hypogaea HOM05D000641 ORTHO05D007351 5.0e-17 92.8 364 32.4
arahy.Tifrunner.gnm1.ann1.IFG75D Arachis hypogaea HOM05D000641 ORTHO05D007351 1.4e-16 91.3 364 32.4
FvH4_3g00020 Fragaria vesca HOM05D000641 ORTHO05D007351 1.4e-16 91.3 296 34.1
Lalb_Chr20g0119771 Lupinus albus HOM05D000641 ORTHO05D007351 5.5e-16 89.4 364 30.8
FAN21G1917 Fragaria x ananassa HOM05D000641 ORTHO05D007351 9.4e-16 88.6 295 33.2
FAN25G1388 Fragaria x ananassa HOM05D000641 ORTHO05D007351 9.4e-16 88.6 295 34.6
Sabra16G0008000 Salix brachista HOM05D000641 ORTHO05D007351 1.2e-15 88.2 298 34.2
CSS0037478 Camellia sinensis var. sinensis HOM05D000641 ORTHO05D007351 1.6e-15 87.8 446 31.4
PSO063G1593 Papaver somniferum HOM05D000641 ORTHO05D007351 6.1e-15 85.9 363 32.2
PSO782G1815 Papaver somniferum HOM05D000641 ORTHO05D007351 7.9e-15 85.5 363 34.2
Atru.chr1.2252 Acer truncatum HOM05D000641 ORTHO05D007351 1.4e-14 84.7 292 33.6
Lalb_Chr15g0088501 Lupinus albus HOM05D000641 ORTHO05D007351 1.8e-14 84.3 371 34.2
TAR623G1040 Trochodendron aralioides HOM05D000641 ORTHO05D007351 1.8e-14 84.3 430 29.8
Cpa.g.sc27.175 Carica papaya HOM05D000641 ORTHO05D007351 5.1e-14 82.8 289 35.6
Gohir.D12G267300 Gossypium hirsutum HOM05D000641 ORTHO05D007351 6.7e-14 82.4 310 34.2
Gorai.008G287300 Gossypium raimondii HOM05D000641 ORTHO05D007351 6.7e-14 82.4 310 34.2
MSTRG.13094 Avicennia marina HOM05D000641 ORTHO05D007351 8.8e-14 82.0 317 31.2
DCAR_022840 Daucus carota HOM05D000641 ORTHO05D007351 8.8e-14 82.0 315 31.7
MD00G1208400 Malus domestica HOM05D000641 ORTHO05D007351 8.8e-14 82.0 194 38.7
Dinv04374 Davidia involucrata HOM05D000641 ORTHO05D007351 1.1e-13 81.6 454 33.5
Oeu031376.1 Olea europaea HOM05D000040 ORTHO05D007351 2.5e-13 80.5 331 31.1
Actinidia02270 Actinidia chinensis HOM05D000641 ORTHO05D007351 1.7e-12 77.8 392 31.4
Glyma.15G124000 Glycine max HOM05D000641 ORTHO05D007351 2.2e-12 77.4 213 32.9
Ca_00787_v3 Cicer arietinum L. HOM05D000641 ORTHO05D007351 3.7e-12 76.6 300 33.3
Glyma.09G018100 Glycine max HOM05D000641 ORTHO05D007351 1.1e-11 75.1 337 30.3
Migut.H01644 Erythranthe guttata HOM05D000641 ORTHO05D007351 4.1e-11 73.2 321 29.0
Potri.006G000400 Populus trichocarpa HOM05D000641 ORTHO05D007351 1.2e-10 71.6 305 32.5
THA.LOC104827569 Tarenaya hassleriana HOM05D000641 ORTHO05D007351 1.2e-10 71.6 300 33.3
MSTRG.14577 Avicennia marina HOM05D000641 ORTHO05D007351 4.5e-10 69.7 318 29.2
Oeu025984.1 Olea europaea HOM05D000641 ORTHO05D007351 4.5e-10 69.7 332 31.3
Oeu025985.1 Olea europaea HOM05D000641 ORTHO05D007351 1.0e-09 68.6 332 31.0
SGA_v2.0_scaffold186G40163 Striga asiatica HOM05D000641 ORTHO05D007351 1.3e-09 68.2 303 28.4
TPR.G10485 Trifolium pratense HOM05D000641 ORTHO05D007351 1.3e-09 68.2 333 31.2
HanXRQChr16g0515301 Helianthus annuus HOM05D000641 ORTHO05D007351 1.7e-09 67.8 333 27.0
Nn1g08378 Nelumbo nucifera HOM05D000641 ORTHO05D007351 8.5e-09 65.5 377 30.5
Hund04725 Selenicereus undatus HOM05D000641 ORTHO05D007351 8.5e-09 65.5 359 27.6
Ca_11372_v3 Cicer arietinum L. HOM05D000641 ORTHO05D007351 1.4e-08 64.7 239 34.3
PGR004G1652 Punica granatum HOM05D000641 ORTHO05D007351 1.9e-08 64.3 349 28.7
Psat1g170840 Pisum sativum HOM05D000641 ORTHO05D007351 4.2e-08 63.2 306 31.7
Aqoxy3G02597 Aquilegia oxysepala HOM05D000641 ORTHO05D007351 5.5e-08 62.8 382 29.3
Aa31LG1G25850 Aethionema arabicum HOM05D000641 ORTHO05D007351 7.2e-08 62.4 287 36.9
Oeu031373.1 Olea europaea HOM05D000641 ORTHO05D007351 9.4e-08 62.0 288 29.2
Rhsim13G0137700 Rhododendron simsii HOM05D000641 ORTHO05D007351 9.4e-08 62.0 424 27.8
AT2G44190 Arabidopsis thaliana HOM05D000641 ORTHO05D007351 1.6e-07 61.2 292 34.6
unitig_0.g969 Utricularia gibba HOM05D000641 ORTHO05D007351 1.6e-07 61.2 313 29.7
Eucgr.D00975 Eucalyptus grandis HOM05D000641 ORTHO05D007351 2.1e-07 60.8 283 31.4
THA.LOC104804470 Tarenaya hassleriana HOM05D000641 ORTHO05D007351 2.1e-07 60.8 315 28.9
Medtr2g028220 Medicago truncatula HOM05D000641 ORTHO05D007351 6.1e-07 59.3 240 29.6
AL5G42180 Arabidopsis lyrata HOM05D000641 ORTHO05D007351 2.3e-06 57.4 290 29.0


User provided reference genes

Program Settings