Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p065543 Quercus lobata HOM05D000595 ORTHO05D014966 4.1e-55 218.0 126 100.0
QL05p065408 Quercus lobata HOM05D000595 ORTHO05D001274 1.3e-32 143.3 101 87.1
Haze_05975 Corylus avellana HOM05D000595 ORTHO05D001274 2.3e-13 79.3 72 55.6
Haze_10399 Corylus avellana HOM05D000595 ORTHO05D001274 2.3e-13 79.3 72 55.6
Cfa000750 Carpinus fangiana HOM05D000595 ORTHO05D001274 1.5e-12 76.6 72 54.2
Dinv26337 Davidia involucrata HOM05D000595 ORTHO05D001274 7.4e-12 74.3 95 49.5
CiPaw.09G149700 Carya illinoinensis HOM05D000595 ORTHO05D001274 2.8e-11 72.4 62 59.7
GSVIVG01037959001 Vitis vinifera HOM05D000595 ORTHO05D001274 1.4e-10 70.1 72 51.4
Hma1.2p1_0410F.1_g147030 Hydrangea macrophylla HOM05D000595 ORTHO05D014966 3.1e-10 68.9 64 56.2
CiPaw.09G149600 Carya illinoinensis HOM05D000595 ORTHO05D001274 9.0e-10 67.4 61 54.1
Ciclev10014196m.g Citrus clementina HOM05D000595 ORTHO05D001274 1.5e-09 66.6 101 44.6
Ciclev10030449m.g Citrus clementina HOM05D000595 ORTHO05D001274 4.5e-09 65.1 101 43.6
Rhsim13G0126700 Rhododendron simsii HOM05D000595 ORTHO05D001274 7.6e-09 64.3 97 41.2
Sed0012254 Sechium edule HOM05D000595 ORTHO05D001274 1.7e-08 63.2 73 45.2
vmacro03478 Vaccinium macrocarpon HOM05D000595 ORTHO05D001274 1.7e-08 63.2 49 57.1
Aqoxy1G01549 Aquilegia oxysepala HOM05D000595 ORTHO05D000365 4.9e-08 61.6 55 54.5
Nitab4.5_0002444g0040 Nicotiana tabacum HOM05D000595 ORTHO05D001274 4.9e-08 61.6 92 42.4
Aqoxy1G01550 Aquilegia oxysepala HOM05D000595 ORTHO05D001274 6.4e-08 61.2 72 48.6
Prupe.4G103600 Prunus persica HOM05D000595 ORTHO05D001274 6.4e-08 61.2 90 41.1
Thecc.06G052600 Theobroma cacao HOM05D000595 ORTHO05D001274 6.4e-08 61.2 71 52.1
Duzib192G0737 Durio zibethinus HOM05D000595 ORTHO05D001274 1.1e-07 60.5 51 60.8
MBI02_g38813_MAGBIO Magnolia biondii HOM05D000595 ORTHO05D014966 1.1e-07 60.5 44 61.4
FvH4_3g11611 Fragaria vesca HOM05D000595 ORTHO05D001274 3.2e-07 58.9 51 56.9
PSO675G7306 Papaver somniferum HOM05D000595 ORTHO05D001274 4.2e-07 58.5 76 42.1
Nitab4.5_0000691g0140 Nicotiana tabacum HOM05D000595 ORTHO05D001274 7.1e-07 57.8 68 45.6
Oeu024450.1 Olea europaea HOM05D000595 ORTHO05D001274 7.1e-07 57.8 92 41.3
RcHm_v2.0_Chr5g0018581 Rosa chinensis HOM05D000595 ORTHO05D001274 7.1e-07 57.8 73 46.6
Eucgr.K01962 Eucalyptus grandis HOM05D000595 ORTHO05D001274 9.3e-07 57.4 76 36.8
Nn7g37727 Nelumbo nucifera HOM05D000595 ORTHO05D001274 9.3e-07 57.4 73 41.1
Oeu063148.5 Olea europaea HOM05D000595 ORTHO05D001274 9.3e-07 57.4 44 63.6
Ciclev10014274m.g Citrus clementina HOM05D000595 ORTHO05D001274 1.2e-06 57.0 47 61.7
FAN16G2623 Fragaria x ananassa HOM05D000595 ORTHO05D001274 1.6e-06 56.6 73 43.8
Gorai.009G115500 Gossypium raimondii HOM05D000595 ORTHO05D001274 1.6e-06 56.6 51 52.9
unitig_748.g7352 Utricularia gibba HOM05D000595 ORTHO05D001274 1.6e-06 56.6 72 43.1
Nitab4.5_0011130g0010 Nicotiana tabacum HOM05D000595 ORTHO05D001274 2.1e-06 56.2 83 42.2
FAN21G3718 Fragaria x ananassa HOM05D000595 ORTHO05D001274 2.7e-06 55.8 73 43.8
HPP92_011024 Vanilla planifolia HOM05D000595 ORTHO05D001274 2.7e-06 55.8 58 53.4
Actinidia04411 Actinidia chinensis HOM05D000595 ORTHO05D001274 3.5e-06 55.5 77 46.8
RcHm_v2.0_Chr5g0018571 Rosa chinensis HOM05D000595 ORTHO05D001274 3.5e-06 55.5 53 54.7
Gohir.D05G111200 Gossypium hirsutum HOM05D000595 ORTHO05D001274 6.0e-06 54.7 51 52.9
Potri.011G154500 Populus trichocarpa HOM05D000595 ORTHO05D001274 6.0e-06 54.7 56 55.4
Gohir.A05G110800 Gossypium hirsutum HOM05D000595 ORTHO05D001274 7.9e-06 54.3 51 51.0
Lj6g0014997 Lotus japonicus HOM05D000595 ORTHO05D001274 7.9e-06 54.3 72 40.3
MD05G1262300 Malus domestica HOM05D000595 ORTHO05D001274 7.9e-06 54.3 70 50.0
Sabra16G0299400 Salix brachista HOM05D000595 ORTHO05D001274 7.9e-06 54.3 71 39.4


User provided reference genes

Program Settings