Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p065459 Quercus lobata HOM05D006323 ORTHO05D007827 3.1e-184 648.3 314 100.0
QL12p038177 Quercus lobata HOM05D006323 ORTHO05D007827 3.0e-179 631.7 306 100.0
CiPaw.07G174200 Carya illinoinensis HOM05D006323 ORTHO05D007827 1.3e-129 466.8 315 74.3
Haze_22429 Corylus avellana HOM05D006323 ORTHO05D007827 2.7e-124 449.1 314 72.0
Cfa013771 Carpinus fangiana HOM05D006323 ORTHO05D007827 1.6e-119 433.3 314 70.1
ClCG08G016540 Citrullus lanatus HOM05D006323 ORTHO05D007827 2.0e-119 433.0 322 69.9
MELO3C010800.2 Cucumis melo HOM05D006323 ORTHO05D007827 9.4e-117 424.1 317 68.1
CsaV3_2G026070 Cucumis sativus L. HOM05D006323 ORTHO05D007827 9.4e-117 424.1 317 68.5
Dinv44950 Davidia involucrata HOM05D006323 ORTHO05D007827 8.0e-116 421.0 309 69.3
Hma1.2p1_0819F.1_g223630 Hydrangea macrophylla HOM05D006323 ORTHO05D007827 4.8e-113 411.8 318 67.0
RcHm_v2.0_Chr6g0309741 Rosa chinensis HOM05D006323 ORTHO05D007827 3.8e-110 402.1 315 66.0
Actinidia38108 Actinidia chinensis HOM05D006323 ORTHO05D007827 3.2e-109 399.1 312 64.7
Sed0007452 Sechium edule HOM05D006323 ORTHO05D007827 9.4e-109 397.5 318 65.4
Prupe.1G422100 Prunus persica HOM05D006323 ORTHO05D007827 1.6e-108 396.7 305 64.6
TAR381G0342 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.6e-108 396.7 306 65.4
TAR381G1608 Trochodendron aralioides HOM05D006323 ORTHO05D007827 3.6e-108 395.6 306 65.0
arahy.Tifrunner.gnm1.ann1.JK4I75 Arachis hypogaea HOM05D006323 ORTHO05D007827 6.1e-108 394.8 314 63.1
CANSAT25G0442 Cannabis sativa HOM05D006323 ORTHO05D007827 6.1e-108 394.8 315 65.4
Nn5g30609 Nelumbo nucifera HOM05D006323 ORTHO05D007827 2.0e-106 389.8 305 63.6
Duzib093G0619 Durio zibethinus HOM05D006323 ORTHO05D007827 1.8e-104 383.3 314 61.8
Eucgr.F00088 Eucalyptus grandis HOM05D006323 ORTHO05D007827 4.5e-103 378.6 304 63.5
Lj5g0017088 Lotus japonicus HOM05D006323 ORTHO05D007827 4.5e-103 378.6 306 64.1
Thecc.08G088000 Theobroma cacao HOM05D006323 ORTHO05D007827 7.7e-103 377.9 313 61.3
FAN20G1244 Fragaria x ananassa HOM05D006323 ORTHO05D007827 1.0e-102 377.5 314 63.1
FvH4_2g32960 Fragaria vesca HOM05D006323 ORTHO05D007827 1.7e-102 376.7 314 63.1
FAN24G0652 Fragaria x ananassa HOM05D006323 ORTHO05D007827 2.3e-102 376.3 314 63.1
CSS0045238 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 8.6e-102 374.4 309 63.4
FAN15G2783 Fragaria x ananassa HOM05D006323 ORTHO05D007827 1.5e-101 373.6 314 62.1
CSS0024022 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 3.3e-101 372.5 309 63.1
FAN27G3326 Fragaria x ananassa HOM05D006323 ORTHO05D007827 9.5e-101 370.9 314 62.4
Gohir.A05G210400 Gossypium hirsutum HOM05D006323 ORTHO05D007827 1.6e-100 370.2 314 61.5
Lalb_Chr14g0368151 Lupinus albus HOM05D006323 ORTHO05D007827 2.8e-100 369.4 319 59.6
Gohir.D05G213700 Gossypium hirsutum HOM05D006323 ORTHO05D007827 4.7e-100 368.6 315 60.6
Cpa.g.sc142.31 Carica papaya HOM05D006323 ORTHO05D007827 6.1e-100 368.2 303 60.7
PGR083G0013 Punica granatum HOM05D006323 ORTHO05D007827 6.1e-100 368.2 304 60.2
Gorai.009G220400 Gossypium raimondii HOM05D006323 ORTHO05D007827 8.0e-100 367.9 315 61.3
CSS0010458 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 1.4e-99 367.1 326 61.7
THA.LOC104825780 Tarenaya hassleriana HOM05D006323 ORTHO05D007827 2.0e-98 363.2 295 61.0
Cpa.g.sc142.34 Carica papaya HOM05D006323 ORTHO05D007827 2.6e-98 362.8 303 60.4
Nitab4.5_0003725g0070 Nicotiana tabacum HOM05D006323 ORTHO05D007827 2.6e-98 362.8 316 60.4
CSS0050369 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 7.5e-98 361.3 324 61.7
TPR.G13155 Trifolium pratense HOM05D006323 ORTHO05D007827 3.7e-97 359.0 303 61.4
vmacro22049 Vaccinium macrocarpon HOM05D006323 ORTHO05D007827 1.8e-96 356.7 316 63.9
TWI56G0563 Tripterygium wilfordii HOM05D006323 ORTHO05D007827 2.4e-96 356.3 323 57.3
Nitab4.5_0000497g0170 Nicotiana tabacum HOM05D006323 ORTHO05D007827 4.1e-96 355.5 315 58.4
Sopen04g031380 Solanum pennellii HOM05D006323 ORTHO05D007827 9.2e-96 354.4 304 59.5
Ca_13213_v3 Cicer arietinum L. HOM05D006323 ORTHO05D007827 2.0e-95 353.2 300 62.7
PGSC0003DMG400010620 Solanum tuberosum HOM05D006323 ORTHO05D007827 2.0e-95 353.2 304 58.9
Psat6g018000 Pisum sativum HOM05D006323 ORTHO05D007827 3.5e-95 352.4 315 60.0
PSO675G0675 Papaver somniferum HOM05D006323 ORTHO05D007827 5.9e-95 351.7 324 56.5
PSO541G5960 Papaver somniferum HOM05D006323 ORTHO05D007827 3.9e-94 349.0 316 57.0
Aqoxy6G02596 Aquilegia oxysepala HOM05D006323 ORTHO05D007827 8.6e-94 347.8 314 58.0
Potri.002G117900 Populus trichocarpa HOM05D006323 ORTHO05D007827 3.3e-93 345.9 296 58.8
Oeu016579.1 Olea europaea HOM05D006323 ORTHO05D007827 7.3e-93 344.7 309 56.3
Medtr1g017940 Medicago truncatula HOM05D006323 ORTHO05D007827 9.5e-93 344.4 310 59.0
Manes.18G047100 Manihot esculenta HOM05D006323 ORTHO05D007827 6.2e-92 341.7 300 57.3
Sabra02G0092600 Salix brachista HOM05D006323 ORTHO05D007827 1.8e-91 340.1 296 58.1
Migut.N02786 Erythranthe guttata HOM05D006323 ORTHO05D007827 2.2e-89 333.2 305 53.8
Ciclev10001174m.g Citrus clementina HOM05D006323 ORTHO05D007827 6.4e-89 331.6 302 57.9
CAN.G724.32 Capsicum annuum HOM05D006323 ORTHO05D007827 8.3e-89 331.3 299 57.5
Phvul.001G028300 Phaseolus vulgaris HOM05D006323 ORTHO05D007827 1.4e-88 330.5 308 55.5
Rhsim07G0219300 Rhododendron simsii HOM05D006323 ORTHO05D007827 3.0e-86 322.8 324 56.5
VMungo0647G1220 Vigna mungo HOM05D006323 ORTHO05D007827 3.0e-86 322.8 300 55.0
Hund05295 Selenicereus undatus HOM05D006323 ORTHO05D007827 5.6e-85 318.5 307 54.7
Atru.chr13.839 Acer truncatum HOM05D006323 ORTHO05D007827 1.6e-84 317.0 306 55.9
EL10Ac1g02373 Beta vulgaris HOM05D006323 ORTHO05D007827 3.6e-84 315.8 305 57.4
SGA_v2.0_scaffold28G11834 Striga asiatica HOM05D006323 ORTHO05D007827 4.7e-84 315.5 305 54.4
CDE04G3275 Ceratophyllum demersum HOM05D006323 ORTHO05D007827 3.1e-83 312.8 304 54.9
HanXRQChr10g0298611 Helianthus annuus HOM05D006323 ORTHO05D007827 6.8e-83 311.6 308 53.9
Glyma.17G234600 Glycine max HOM05D006323 ORTHO05D007827 8.9e-83 311.2 313 53.4
Aa31LG5G21510 Aethionema arabicum HOM05D006323 ORTHO05D007827 1.5e-82 310.5 292 52.7
arahy.Tifrunner.gnm1.ann1.694GR7 Arachis hypogaea HOM05D006323 ORTHO05D007827 5.8e-82 308.5 259 60.6
Thhalv10028685m.g Eutrema salsugineum HOM05D006323 ORTHO05D007827 1.3e-81 307.4 296 54.7
Sp6g10510 Schrenkiella parvula HOM05D006323 ORTHO05D007827 2.9e-81 306.2 297 56.6
Carub.0003s1171 Capsella rubella HOM05D006323 ORTHO05D007827 1.4e-80 303.9 299 54.5
SalBow2G0555 Salvia bowleyana HOM05D006323 ORTHO05D007827 1.4e-80 303.9 301 51.2
Glyma.14G089027 Glycine max HOM05D006323 ORTHO05D007827 2.4e-80 303.1 312 53.2
Lsat_1_v5_gn_1_1301 Lactuca sativa HOM05D006323 ORTHO05D007827 2.4e-80 303.1 309 52.1
AL3G24000 Arabidopsis lyrata HOM05D006323 ORTHO05D007827 4.1e-80 302.4 298 55.4
COL.COLO4_28496 Corchorus olitorius HOM05D006323 ORTHO05D007827 5.1e-78 295.4 257 58.0
TAR628G0857 Trochodendron aralioides HOM05D006323 ORTHO05D007827 4.3e-77 292.4 289 56.4
Ah.05g167080 Amaranthus hybridus HOM05D006323 ORTHO05D007827 2.1e-76 290.0 300 53.3
C03p33680 Brassica napus HOM05D006323 ORTHO05D007827 3.6e-76 289.3 297 53.5
BolC3t15688H Brassica oleracea HOM05D006323 ORTHO05D007827 3.6e-76 289.3 297 53.5
TAR625G0711 Trochodendron aralioides HOM05D006323 ORTHO05D007827 3.6e-76 289.3 218 66.1
AT3G12350 Arabidopsis thaliana HOM05D006323 ORTHO05D007827 6.2e-76 288.5 298 53.4
BcaC01g04786 Brassica carinata HOM05D006323 ORTHO05D007827 4.0e-75 285.8 297 51.9
GSVIVG01009337001 Vitis vinifera HOM05D006323 ORTHO05D007827 2.0e-74 283.5 315 51.4
CARHR287100 Cardamine hirsuta HOM05D006323 ORTHO05D007827 7.6e-74 281.6 296 50.7
A03p27900 Brassica napus HOM05D006323 ORTHO05D007827 9.9e-74 281.2 295 50.5
BcaB01g02882 Brassica carinata HOM05D006323 ORTHO05D007827 1.9e-72 276.9 297 49.8
AUR62022472 Chenopodium quinoa HOM05D006323 ORTHO05D007827 3.2e-72 276.2 305 51.8
BraA03t12002Z Brassica rapa HOM05D006323 ORTHO05D007827 4.1e-72 275.8 295 48.8
HPP92_013407 Vanilla planifolia HOM05D006323 ORTHO05D007827 5.6e-69 265.4 294 49.0
ATR0739G201 Amborella trichopoda HOM05D006323 ORTHO05D007827 1.2e-68 264.2 340 45.9
HPP92_013383 Vanilla planifolia HOM05D006323 ORTHO05D007827 1.8e-67 260.4 294 48.3
CAN.G724.31 Capsicum annuum HOM05D006323 ORTHO05D007827 3.8e-65 252.7 308 44.5
SEGI_30290 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 7.1e-64 248.4 328 44.5
Sc26g0004210 Simmondsia chinensis HOM05D006323 ORTHO05D007827 1.3e-62 244.2 253 51.4
BcaC01g04794 Brassica carinata HOM05D006323 ORTHO05D007827 1.7e-62 243.8 297 47.1
AUR62037416 Chenopodium quinoa HOM05D006323 ORTHO05D007827 2.9e-57 226.5 191 58.1
unitig_8.g4874 Utricularia gibba HOM05D006323 ORTHO05D007827 4.6e-55 219.2 236 54.2
Mapoly0007s0129 Marchantia polymorpha HOM05D006323 ORTHO05D007827 1.5e-45 187.6 343 35.3
Lj4A71T64 Lonicera japonica HOM05D006323 ORTHO05D007827 1.5e-42 177.6 171 59.1
HPP92_013381 Vanilla planifolia HOM05D006323 ORTHO05D007827 1.3e-38 164.5 197 45.7
Pp3c15_12240 Physcomitrium patens HOM05D006323 ORTHO05D007827 9.6e-37 158.3 366 31.1
QL04p027551 Quercus lobata HOM05D006323 ORTHO05D007827 2.8e-36 156.8 90 83.3
TAR623G1714 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.4e-35 154.5 115 61.7
AagrBONN_evm.TU.Sc2ySwM_362.2944 Anthoceros agrestis HOM05D006323 ORTHO05D007827 9.0e-35 151.8 311 32.8
FvH4_3g44630 Fragaria vesca HOM05D006323 ORTHO05D007827 3.8e-33 146.4 114 59.6
CBR_g25752 Chara braunii HOM05D006323 ORTHO05D007827 3.6e-23 113.2 376 28.2
Cc10_g05020 Coffea canephora HOM05D006323 ORTHO05D007827 3.0e-22 110.2 122 57.4
ECA247G3150 Erigeron canadensis HOM05D006323 ORTHO05D007827 1.3e-20 104.8 168 42.9
Zm00001eb264620 Zea mays HOM05D006323 ORTHO05D007827 4.8e-20 102.8 231 34.6
TAR623G1335 Trochodendron aralioides HOM05D006323 ORTHO05D007827 2.4e-19 100.5 65 66.2
Lj5P501T7 Lonicera japonica HOM05D006323 ORTHO05D007827 2.6e-18 97.1 96 62.5
Lj1P1160T24 Lonicera japonica HOM05D006323 ORTHO05D007827 2.2e-17 94.0 84 64.3
Os12g0511000 Oryza sativa ssp. japonica HOM05D006323 ORTHO05D007827 6.1e-15 85.9 232 32.3
Oeu037483.1 Olea europaea HOM05D006323 ORTHO05D007827 1.6e-07 61.2 137 36.5
HPP92_006886 Vanilla planifolia HOM05D003519 ORTHO05D004443 2.3e-06 57.4 138 29.0


User provided reference genes

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