Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p063530 Quercus lobata HOM05D000002 ORTHO05D004433 4.5e-86 321.2 163 100.0
SHI44323 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-24 115.9 241 35.3
SHI51732 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-20 104.0 297 29.6
SHI04823 Sapria himalayana HOM05D000002 ORTHO05D004433 2.1e-19 99.8 296 28.4
SHI38827 Sapria himalayana HOM05D000002 ORTHO05D004433 3.1e-18 95.9 299 28.4
MD01G1096700 Malus domestica HOM05D000002 ORTHO05D000001 1.5e-17 93.6 74 60.8
SHI32919 Sapria himalayana HOM05D000002 ORTHO05D004433 4.4e-17 92.0 72 62.5
SHI45609 Sapria himalayana HOM05D000002 ORTHO05D000001 5.8e-17 91.7 314 27.1
SHI05549 Sapria himalayana HOM05D000002 ORTHO05D004433 7.5e-17 91.3 72 61.1
SHI10489 Sapria himalayana HOM05D000002 ORTHO05D004433 1.3e-16 90.5 72 62.5
SHI18328 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-16 90.1 315 27.9
SHI14609 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-16 89.4 215 33.5
ECA233G2071 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.9e-16 88.6 283 25.8
SHI32313 Sapria himalayana HOM05D000002 ORTHO05D004433 4.9e-16 88.6 72 61.1
ECA236G5067 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.4e-16 88.2 74 55.4
MD14G1034300 Malus domestica HOM05D000038 ORTHO05D004433 6.4e-16 88.2 69 62.3
SHI43060 Sapria himalayana HOM05D000002 ORTHO05D004433 6.4e-16 88.2 72 62.5
ECA234G3440 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-15 87.0 285 27.0
Sopen00g007880 Solanum pennellii HOM05D000002 ORTHO05D004433 1.9e-15 86.7 225 28.4
ECA234G3041 Erigeron canadensis HOM05D001549 ORTHO05D003098 2.4e-15 86.3 145 38.6
ECA246G2496 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.1e-15 85.5 74 55.4
TAR610G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 5.4e-15 85.1 325 25.8
ECA233G1874 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.0e-15 84.7 74 55.4
ECA240G4274 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.0e-15 84.7 74 55.4
SHI49936 Sapria himalayana HOM05D000002 ORTHO05D000001 9.2e-15 84.3 72 59.7
Ah.04g159010 Amaranthus hybridus HOM05D000002 ORTHO05D004433 1.2e-14 84.0 69 59.4
SHI04168 Sapria himalayana HOM05D000002 ORTHO05D004433 1.6e-14 83.6 157 38.2
ECA238G4719 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.0e-14 83.2 125 41.6
ECA240G0479 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.0e-14 83.2 74 52.7
Oeu035997.1 Olea europaea HOM05D000002 ORTHO05D004433 2.0e-14 83.2 69 55.1
Ah.03g145180 Amaranthus hybridus HOM05D000002 ORTHO05D004433 2.7e-14 82.8 71 57.7
Ah.16g108610 Amaranthus hybridus HOM05D000002 ORTHO05D004433 2.7e-14 82.8 69 58.0
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.7e-14 82.8 257 26.5
Ah.01g008310 Amaranthus hybridus HOM05D000002 ORTHO05D004433 4.6e-14 82.0 69 58.0
ECA233G2777 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.6e-14 82.0 275 26.2
ECA234G1536 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.6e-14 82.0 74 54.1
SHI21269 Sapria himalayana HOM05D000002 ORTHO05D004433 6.0e-14 81.6 196 35.2
Ah.13g077590 Amaranthus hybridus HOM05D000002 ORTHO05D000001 2.3e-13 79.7 69 56.5
ECA246G3093 Erigeron canadensis HOM05D001467 ORTHO05D001214 2.3e-13 79.7 73 56.2
Gohir.D10G094150 Gossypium hirsutum HOM05D000002 ORTHO05D004433 3.0e-13 79.3 77 51.9
Oeu003015.1 Olea europaea HOM05D000002 ORTHO05D004433 3.0e-13 79.3 67 50.7
Ah.13g069620 Amaranthus hybridus HOM05D000002 ORTHO05D004433 5.0e-13 78.6 69 55.1
ECA246G0537 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.0e-13 78.6 141 37.6
Glyma.07G117100 Glycine max HOM05D000002 ORTHO05D004433 6.6e-13 78.2 67 53.7
Nn2g13681 Nelumbo nucifera HOM05D000002 ORTHO05D004433 6.6e-13 78.2 70 54.3
SHI45691 Sapria himalayana HOM05D000002 ORTHO05D004433 8.6e-13 77.8 69 58.0
Oeu001115.1 Olea europaea HOM05D000002 ORTHO05D004433 1.1e-12 77.4 69 52.2
PGSC0003DMG400033163 Solanum tuberosum HOM05D000002 ORTHO05D004433 1.1e-12 77.4 69 47.8
ECA238G3349 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-12 77.0 73 52.1
ECA247G3536 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-12 77.0 73 54.8
ECA248G0687 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-12 77.0 72 51.4
Oeu034209.1 Olea europaea HOM05D000002 ORTHO05D004433 3.3e-12 75.9 69 49.3
CSS0046023 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 5.6e-12 75.1 155 32.3
CSS0046925 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 5.6e-12 75.1 236 25.8
Oeu012846.1 Olea europaea HOM05D003971 ORTHO05D004433 5.6e-12 75.1 69 49.3
Ah.16g106880 Amaranthus hybridus HOM05D000002 ORTHO05D004433 9.5e-12 74.3 69 52.2
ECA238G4301 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.8e-11 72.8 74 47.3
ECA248G0669 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.8e-11 72.8 158 34.2
ECA248G3794 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.8e-11 72.8 73 49.3
Sopen11g022850 Solanum pennellii HOM05D000002 ORTHO05D004433 3.6e-11 72.4 69 42.0
PGSC0003DMG400023646 Solanum tuberosum HOM05D000002 ORTHO05D004433 6.2e-11 71.6 71 45.1
Oeu022773.1 Olea europaea HOM05D000002 ORTHO05D004433 8.0e-11 71.2 69 50.7
Nn4g23986 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.1e-10 70.9 71 42.3
Oeu050054.1 Olea europaea HOM05D000002 ORTHO05D004433 1.1e-10 70.9 69 49.3
Thecc.03G106900 Theobroma cacao HOM05D000002 ORTHO05D004433 1.1e-10 70.9 155 29.7
Oeu055579.1 Olea europaea HOM05D000002 ORTHO05D004433 3.1e-10 69.3 69 47.8
PSO675G3339 Papaver somniferum HOM05D000002 ORTHO05D004433 3.1e-10 69.3 71 46.5
SHI22389 Sapria himalayana HOM05D000002 ORTHO05D004433 6.8e-10 68.2 72 50.0
Nn1g06847 Nelumbo nucifera HOM05D000002 ORTHO05D004433 8.9e-10 67.8 69 44.9
SHI06746 Sapria himalayana HOM05D000002 ORTHO05D004433 8.9e-10 67.8 311 23.8
SHI10029 Sapria himalayana HOM05D000002 ORTHO05D004433 8.9e-10 67.8 59 59.3
SHI09919 Sapria himalayana HOM05D000002 ORTHO05D004433 2.0e-09 66.6 45 66.7
SHI16256 Sapria himalayana HOM05D000002 ORTHO05D004433 2.0e-09 66.6 297 23.9
CSS0020823 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.6e-09 66.2 157 32.5
Nn5g27722 Nelumbo nucifera HOM05D000002 ORTHO05D004433 2.6e-09 66.2 71 43.7
Dinv02026 Davidia involucrata HOM05D028709 ORTHO05D004433 3.4e-09 65.9 71 43.7
Nn8g39416 Nelumbo nucifera HOM05D000002 ORTHO05D000001 4.4e-09 65.5 73 41.1
Gohir.D08G274150 Gossypium hirsutum HOM05D000002 ORTHO05D004433 5.8e-09 65.1 71 42.3
Gorai.004G292700 Gossypium raimondii HOM05D000002 ORTHO05D004433 5.8e-09 65.1 71 42.3
Sopen09g028980 Solanum pennellii HOM05D000002 ORTHO05D004433 5.8e-09 65.1 69 34.8
Nn1g02075 Nelumbo nucifera HOM05D000002 ORTHO05D004433 7.5e-09 64.7 72 41.7
SHI18425 Sapria himalayana HOM05D000002 ORTHO05D004433 1.3e-08 63.9 59 55.9
SHI00406 Sapria himalayana HOM05D000002 ORTHO05D004433 1.7e-08 63.5 59 55.9
Sopen09g027930 Solanum pennellii HOM05D000002 ORTHO05D004433 1.7e-08 63.5 72 40.3
ECA233G2147 Erigeron canadensis HOM05D000509 ORTHO05D004433 2.9e-08 62.8 49 55.1
Oeu026048.1 Olea europaea HOM05D000002 ORTHO05D000001 2.9e-08 62.8 43 60.5
CAN.G401.9 Capsicum annuum HOM05D000002 ORTHO05D004433 3.7e-08 62.4 67 46.3
MD01G1222200 Malus domestica HOM05D000002 ORTHO05D004433 3.7e-08 62.4 92 39.1
SHI07649 Sapria himalayana HOM05D000002 ORTHO05D004433 6.4e-08 61.6 296 23.0
Cpa.g.sc11.103 Carica papaya HOM05D000002 ORTHO05D004433 1.4e-07 60.5 71 36.6
Lsat_1_v5_gn_4_123500 Lactuca sativa HOM05D000002 ORTHO05D004433 1.9e-07 60.1 140 31.4
Nn8g40511 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.9e-07 60.1 72 37.5
Nn3g20324 Nelumbo nucifera HOM05D000002 ORTHO05D004433 2.4e-07 59.7 75 40.0
GSVIVG01017482001 Vitis vinifera HOM05D000002 ORTHO05D004433 2.4e-07 59.7 44 52.3
Nn1g07613 Nelumbo nucifera HOM05D000002 ORTHO05D000001 3.2e-07 59.3 85 40.0
Nn1g09492 Nelumbo nucifera HOM05D000002 ORTHO05D004433 3.2e-07 59.3 70 37.1
Prupe.7G032100 Prunus persica HOM05D000002 ORTHO05D004433 4.1e-07 58.9 56 50.0
SHI47859 Sapria himalayana HOM05D000002 ORTHO05D004433 4.1e-07 58.9 43 55.8
SHI27796 Sapria himalayana HOM05D000002 ORTHO05D000001 5.4e-07 58.5 65 41.5
ECA232G4651 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.1e-07 58.2 58 44.8
SHI10030 Sapria himalayana HOM05D000002 ORTHO05D000001 7.1e-07 58.2 65 40.0
SHI10488 Sapria himalayana HOM05D000002 ORTHO05D000001 7.1e-07 58.2 65 41.5
CAN.G492.33 Capsicum annuum HOM05D000002 ORTHO05D004433 9.2e-07 57.8 58 44.8
Nn4g25779 Nelumbo nucifera HOM05D000002 ORTHO05D004433 9.2e-07 57.8 72 37.5
Oeu032225.1 Olea europaea HOM05D000002 ORTHO05D004433 9.2e-07 57.8 81 39.5
SHI02070 Sapria himalayana HOM05D000002 ORTHO05D000001 9.2e-07 57.8 43 55.8
PGSC0003DMG400010694 Solanum tuberosum HOM05D000002 ORTHO05D004433 9.2e-07 57.8 64 45.3
Oeu033717.1 Olea europaea HOM05D000002 ORTHO05D004433 1.2e-06 57.4 47 51.1
Sopen05g027370 Solanum pennellii HOM05D000002 ORTHO05D004433 1.2e-06 57.4 103 35.0
CANSAT80G0509 Cannabis sativa HOM05D000054 ORTHO05D000286 1.6e-06 57.0 43 55.8
CsaV3_6G015590 Cucumis sativus L. HOM05D000002 ORTHO05D004433 1.6e-06 57.0 163 30.1
Dinv02177 Davidia involucrata HOM05D000002 ORTHO05D004433 1.6e-06 57.0 44 54.5
SHI32918 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-06 57.0 65 40.0
Nn1g02545 Nelumbo nucifera HOM05D000002 ORTHO05D004433 2.7e-06 56.2 47 48.9
SHI12756 Sapria himalayana HOM05D000002 ORTHO05D004433 3.5e-06 55.8 72 45.8
SHI45690 Sapria himalayana HOM05D000002 ORTHO05D000001 6.0e-06 55.1 86 33.7
SHI47495 Sapria himalayana HOM05D000002 ORTHO05D000001 6.0e-06 55.1 86 33.7
SHI37106 Sapria himalayana HOM05D000002 ORTHO05D000001 7.8e-06 54.7 65 38.5


User provided reference genes

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