Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p061562 Quercus lobata HOM05D000041 ORTHO05D337864 6.3e-88 327.4 166 100.0
QL05p053152 Quercus lobata HOM05D000041 ORTHO05D004120 1.9e-20 103.2 264 31.8
QL05p053159 Quercus lobata HOM05D000041 ORTHO05D004120 1.7e-16 90.1 72 63.9
QL05p061617 Quercus lobata HOM05D000041 ORTHO05D004120 8.5e-16 87.8 60 76.7
QL05p053111 Quercus lobata HOM05D000041 ORTHO05D004120 1.4e-15 87.0 70 60.0
QL93p1903_0039 Quercus lobata HOM05D000041 ORTHO05D004120 1.4e-15 87.0 70 60.0
QL05p053228 Quercus lobata HOM05D000041 ORTHO05D004120 4.6e-14 82.0 70 58.6
QL05p053182 Quercus lobata HOM05D000041 ORTHO05D004120 1.8e-13 80.1 86 52.3
QL05p061169 Quercus lobata HOM05D000041 ORTHO05D000061 2.3e-13 79.7 76 51.3
QL05p061588 Quercus lobata HOM05D000041 ORTHO05D004120 2.3e-13 79.7 76 51.3
QL05p053128 Quercus lobata HOM05D000041 ORTHO05D004120 6.7e-13 78.2 67 59.7
QL05p061130 Quercus lobata HOM05D000041 ORTHO05D004120 1.5e-12 77.0 88 50.0
QL10p058460 Quercus lobata HOM05D000041 ORTHO05D004120 2.0e-12 76.6 259 28.2
QL05p061267 Quercus lobata HOM05D000041 ORTHO05D004120 4.3e-12 75.5 73 57.5
QL05p061396 Quercus lobata HOM05D000041 ORTHO05D004120 4.3e-12 75.5 79 55.7
QL05p061166 Quercus lobata HOM05D000041 ORTHO05D004120 1.8e-10 70.1 64 54.7
QL05p061144 Quercus lobata HOM05D000041 ORTHO05D004120 2.4e-10 69.7 76 59.2
QL04p094184 Quercus lobata HOM05D000041 ORTHO05D004120 1.2e-09 67.4 59 62.7
QL05p061252 Quercus lobata HOM05D000041 ORTHO05D004120 1.2e-09 67.4 59 62.7
QL05p061306 Quercus lobata HOM05D000041 ORTHO05D004120 1.2e-09 67.4 59 62.7
QL05p061458 Quercus lobata HOM05D000041 ORTHO05D000452 1.2e-09 67.4 76 50.0
QL05p061348 Quercus lobata HOM05D000041 ORTHO05D004120 1.5e-09 67.0 61 59.0
QL05p061384 Quercus lobata HOM05D000041 ORTHO05D004120 2.0e-09 66.6 59 62.7
QL93p1903_0059 Quercus lobata HOM05D000041 ORTHO05D337363 3.4e-09 65.9 50 70.0
QL05p061274 Quercus lobata HOM05D000041 ORTHO05D004120 7.7e-09 64.7 61 59.0
QL05p061532 Quercus lobata HOM05D000041 ORTHO05D004120 7.7e-09 64.7 64 53.1
QL93p1903_0048 Quercus lobata HOM05D000041 ORTHO05D004120 1.0e-08 64.3 59 61.0
QL93p1903_0017 Quercus lobata HOM05D000041 ORTHO05D000452 1.7e-08 63.5 59 55.9
QL05p061657 Quercus lobata HOM05D000041 ORTHO05D004120 3.8e-08 62.4 88 47.7
BcaNung01722 Brassica carinata HOM05D000041 ORTHO05D000061 1.9e-07 60.1 136 32.4
QL05p061070 Quercus lobata HOM05D000041 ORTHO05D004120 2.5e-07 59.7 49 63.3
QL05p061220 Quercus lobata HOM05D000041 ORTHO05D004120 4.2e-07 58.9 73 52.1
QL05p061584 Quercus lobata HOM05D000041 ORTHO05D004120 4.2e-07 58.9 62 51.6
QL05p061629 Quercus lobata HOM05D000041 ORTHO05D004120 4.2e-07 58.9 73 52.1
Lju1225A2G66 Lonicera japonica HOM05D000041 ORTHO05D000452 5.5e-07 58.5 63 47.6
QL02p067055 Quercus lobata HOM05D000041 ORTHO05D000061 5.5e-07 58.5 71 45.1
Lj9A85T83 Lonicera japonica HOM05D000041 ORTHO05D000452 7.2e-07 58.2 63 47.6
Lj9A87T102 Lonicera japonica HOM05D000041 ORTHO05D000452 7.2e-07 58.2 63 47.6
BcaNung00378 Brassica carinata HOM05D000041 ORTHO05D000061 9.4e-07 57.8 91 40.7
Lj9A87T100 Lonicera japonica HOM05D000041 ORTHO05D000452 9.4e-07 57.8 63 46.0
Lj1g0024749 Lotus japonicus HOM05D000041 ORTHO05D004120 9.4e-07 57.8 58 53.4
Lj9C87G11 Lonicera japonica HOM05D000041 ORTHO05D000452 1.2e-06 57.4 63 47.6
Lj1g0012124 Lotus japonicus HOM05D000041 ORTHO05D004120 1.2e-06 57.4 71 46.5
Psat1g069240 Pisum sativum HOM05D000041 ORTHO05D000061 1.2e-06 57.4 153 28.8
QL05p086240 Quercus lobata HOM05D000041 ORTHO05D000061 1.2e-06 57.4 59 47.5
QL05p086522 Quercus lobata HOM05D000041 ORTHO05D000061 1.2e-06 57.4 59 47.5
QL05p087243 Quercus lobata HOM05D000041 ORTHO05D000061 1.2e-06 57.4 59 47.5
Rhsim10G0055200 Rhododendron simsii HOM05D000041 ORTHO05D000061 1.2e-06 57.4 43 60.5
Ah.16g101140 Amaranthus hybridus HOM05D000041 ORTHO05D000061 1.6e-06 57.0 61 45.9
Lj6A594G80 Lonicera japonica HOM05D000041 ORTHO05D000452 1.6e-06 57.0 48 60.4
Lju1225A2T67 Lonicera japonica HOM05D000041 ORTHO05D000452 1.6e-06 57.0 63 46.0
CiPaw.03G086400 Carya illinoinensis HOM05D000041 ORTHO05D000061 2.1e-06 56.6 62 51.6
Duzib211G0147 Durio zibethinus HOM05D000041 ORTHO05D000061 2.1e-06 56.6 50 54.0
Lj9A83G55 Lonicera japonica HOM05D000041 ORTHO05D000452 2.1e-06 56.6 63 46.0
Lj9A88G66 Lonicera japonica HOM05D000041 ORTHO05D000452 2.1e-06 56.6 63 46.0
QL04p094187 Quercus lobata HOM05D000041 ORTHO05D004120 2.1e-06 56.6 57 56.1
QL05p061260 Quercus lobata HOM05D000041 ORTHO05D337694 2.1e-06 56.6 57 56.1
Glyma.08G249200 Glycine max HOM05D000041 ORTHO05D000061 2.7e-06 56.2 142 31.7
Lju50A31G15 Lonicera japonica HOM05D000041 ORTHO05D000452 2.7e-06 56.2 63 46.0
Manes.01G093700 Manihot esculenta HOM05D000041 ORTHO05D000061 2.7e-06 56.2 62 51.6
Manes.01G093901 Manihot esculenta HOM05D000041 ORTHO05D000061 2.7e-06 56.2 62 51.6
QL05p061668 Quercus lobata HOM05D000041 ORTHO05D004120 2.7e-06 56.2 47 59.6
Rhsim10G0055100 Rhododendron simsii HOM05D000041 ORTHO05D000061 3.6e-06 55.8 62 50.0
Ah.08g215010 Amaranthus hybridus HOM05D000041 ORTHO05D000061 4.7e-06 55.5 132 32.6
CSS0013317 Camellia sinensis var. sinensis HOM05D000041 ORTHO05D000061 4.7e-06 55.5 53 54.7
CSS0025794 Camellia sinensis var. sinensis HOM05D000041 ORTHO05D000061 4.7e-06 55.5 53 54.7
Gohir.A11G156766 Gossypium hirsutum HOM05D000041 ORTHO05D004120 4.7e-06 55.5 61 50.8
Dinv34927 Davidia involucrata HOM05D000041 ORTHO05D000061 6.1e-06 55.1 52 51.9
ECA236G2983 Erigeron canadensis HOM05D000041 ORTHO05D000452 6.1e-06 55.1 79 39.2
Lj3C741T8 Lonicera japonica HOM05D000041 ORTHO05D000452 6.1e-06 55.1 53 50.9
Phvul.008G028300 Phaseolus vulgaris HOM05D000041 ORTHO05D004120 6.1e-06 55.1 69 40.6
EL10Ac2g04464 Beta vulgaris HOM05D000041 ORTHO05D000061 7.9e-06 54.7 62 41.9
CANSAT64G3022 Cannabis sativa HOM05D000041 ORTHO05D000061 7.9e-06 54.7 60 38.3
Haze_14407 Corylus avellana HOM05D000041 ORTHO05D000061 7.9e-06 54.7 53 47.2
Lsat_1_v5_gn_4_173140 Lactuca sativa HOM05D000041 ORTHO05D000061 7.9e-06 54.7 60 45.0
Lj9C82G3 Lonicera japonica HOM05D000041 ORTHO05D000452 7.9e-06 54.7 63 44.4
VMungo0464G0781 Vigna mungo HOM05D000041 ORTHO05D000061 7.9e-06 54.7 64 43.8


User provided reference genes

Program Settings