Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p059335 Quercus lobata HOM05D008090 ORTHO05D010156 4.5e-132 474.6 234 100.0
Cfa000975 Carpinus fangiana HOM05D008090 ORTHO05D010156 1.5e-63 246.9 245 62.4
Haze_05542 Corylus avellana HOM05D008090 ORTHO05D010156 4.5e-63 245.4 245 62.0
Prupe.4G076400 Prunus persica HOM05D008090 ORTHO05D010156 6.9e-48 194.9 249 51.0
RcHm_v2.0_Chr5g0013271 Rosa chinensis HOM05D008090 ORTHO05D010156 1.0e-46 191.0 238 50.8
RcHm_v2.0_Chr5g0013301 Rosa chinensis HOM05D008090 ORTHO05D010156 1.3e-46 190.7 238 50.4
MD05G1289100 Malus domestica HOM05D008090 ORTHO05D010156 6.5e-46 188.3 247 50.6
FAN25G1154 Fragaria x ananassa HOM05D008090 ORTHO05D010156 2.5e-45 186.4 238 50.4
FAN16G3306 Fragaria x ananassa HOM05D008090 ORTHO05D010156 4.2e-45 185.7 238 50.4
Lalb_Chr03g0037351 Lupinus albus HOM05D008090 ORTHO05D010156 2.3e-43 179.9 239 46.4
Lj1P1184T52 Lonicera japonica HOM05D008090 ORTHO05D010156 1.1e-42 177.6 255 48.2
Manes.17G067400 Manihot esculenta HOM05D008090 ORTHO05D010156 2.6e-42 176.4 245 43.7
Potri.004G065500 Populus trichocarpa HOM05D008090 ORTHO05D010156 1.3e-41 174.1 246 47.6
Dinv30710 Davidia involucrata HOM05D000133 ORTHO05D010156 2.2e-41 173.3 260 47.3
ClCG03G006940 Citrullus lanatus HOM05D008090 ORTHO05D010156 3.7e-41 172.6 252 47.2
FAN11G2783 Fragaria x ananassa HOM05D000133 ORTHO05D010156 3.7e-41 172.6 241 47.7
Sabra04G0043800 Salix brachista HOM05D008090 ORTHO05D010156 6.3e-41 171.8 246 48.8
TAR629G2487 Trochodendron aralioides HOM05D008090 ORTHO05D010156 1.1e-40 171.0 237 48.5
Sed0014565 Sechium edule HOM05D008090 ORTHO05D010156 1.8e-40 170.2 257 46.7
MELO3C002726.2 Cucumis melo HOM05D008090 ORTHO05D010156 2.4e-40 169.9 238 49.2
CsaV3_1G032520 Cucumis sativus L. HOM05D008090 ORTHO05D010156 4.1e-40 169.1 249 47.0
CANSAT35G0881 Cannabis sativa HOM05D008090 ORTHO05D010156 2.2e-38 163.3 244 45.1
Medtr4g094608 Medicago truncatula HOM05D008090 ORTHO05D010156 3.2e-37 159.5 231 45.9
Thecc.06G154700 Theobroma cacao HOM05D008090 ORTHO05D010156 3.2e-37 159.5 241 45.2
Sc17g0005080 Simmondsia chinensis HOM05D008090 ORTHO05D010156 4.2e-37 159.1 242 44.6
AUR62035141 Chenopodium quinoa HOM05D008090 ORTHO05D010156 1.6e-36 157.1 242 45.5
Lj4g0014733 Lotus japonicus HOM05D008090 ORTHO05D010156 1.6e-36 157.1 250 43.6
Solyc02g070900.1 Solanum lycopersicum HOM05D008090 ORTHO05D010156 2.1e-36 156.8 241 43.6
Gohir.D06G141600 Gossypium hirsutum HOM05D008090 ORTHO05D010156 7.9e-36 154.8 238 45.0
Gorai.010G165200 Gossypium raimondii HOM05D008090 ORTHO05D010156 7.9e-36 154.8 238 45.0
Gohir.A06G136400 Gossypium hirsutum HOM05D008090 ORTHO05D010156 1.0e-35 154.5 237 45.6
Cc09_g09530 Coffea canephora HOM05D008090 ORTHO05D010156 1.4e-35 154.1 242 43.8
COL.COLO4_06066 Corchorus olitorius HOM05D008090 ORTHO05D010156 3.0e-35 152.9 241 45.6
Sopen02g019980 Solanum pennellii HOM05D008090 ORTHO05D010156 3.9e-35 152.5 241 42.3
Hund17789 Selenicereus undatus HOM05D008090 ORTHO05D010156 5.2e-35 152.1 244 41.0
MBI07_g21779_MAGBIO Magnolia biondii HOM05D008090 ORTHO05D010156 1.5e-34 150.6 246 45.5
Nn3g17305 Nelumbo nucifera HOM05D008090 ORTHO05D010156 1.5e-34 150.6 238 41.6
Rhsim13G0192500 Rhododendron simsii HOM05D008090 ORTHO05D010156 1.5e-34 150.6 246 43.9
Psat7g091840 Pisum sativum HOM05D008090 ORTHO05D010156 2.0e-34 150.2 240 41.7
PGSC0003DMG400008320 Solanum tuberosum HOM05D008090 ORTHO05D010156 3.3e-34 149.4 241 41.9
TPR.G4884 Trifolium pratense HOM05D000133 ORTHO05D000259 4.4e-34 149.1 229 43.7
arahy.Tifrunner.gnm1.ann1.548L12 Arachis hypogaea HOM05D008090 ORTHO05D010156 1.3e-33 147.5 237 45.6
CAN.G257.11 Capsicum annuum HOM05D008090 ORTHO05D010156 1.3e-33 147.5 242 43.8
MSTRG.7470 Avicennia marina HOM05D008090 ORTHO05D010156 1.7e-33 147.1 254 41.3
FvH4_3g06110 Fragaria vesca HOM05D000133 ORTHO05D000259 4.8e-33 145.6 175 49.1
Nitab4.5_0029367g0010 Nicotiana tabacum HOM05D008090 ORTHO05D010156 6.3e-33 145.2 248 42.3
arahy.Tifrunner.gnm1.ann1.S5KLBV Arachis hypogaea HOM05D008090 ORTHO05D010156 8.2e-33 144.8 236 43.6
Migut.M00932 Erythranthe guttata HOM05D008090 ORTHO05D010156 3.1e-32 142.9 259 38.2
TAR629G3101 Trochodendron aralioides HOM05D008090 ORTHO05D010156 4.5e-31 139.0 195 47.7
Glyma.05G128100 Glycine max HOM05D008090 ORTHO05D010156 5.9e-31 138.7 237 43.0
Lj2P974T32 Lonicera japonica HOM05D008090 ORTHO05D010156 1.0e-30 137.9 209 45.0
Phvul.002G196300 Phaseolus vulgaris HOM05D008090 ORTHO05D010156 1.3e-30 137.5 235 42.6
EL10Ac4g09546 Beta vulgaris HOM05D008090 ORTHO05D010156 3.8e-30 136.0 248 42.7
Ca_18277_v3 Cicer arietinum L. HOM05D000133 ORTHO05D000259 1.0e-27 127.9 178 42.7
VMungo0251G0641 Vigna mungo HOM05D008090 ORTHO05D010156 8.8e-27 124.8 228 38.6
TWI09G1028 Tripterygium wilfordii HOM05D008090 ORTHO05D010156 2.0e-26 123.6 243 39.5
Peaxi162Scf00347g00042 Petunia axillaris HOM05D008090 ORTHO05D010156 2.2e-25 120.2 239 38.5
Lsat_1_v5_gn_4_30220 Lactuca sativa HOM05D008090 ORTHO05D010156 2.8e-25 119.8 252 37.3
Ah.00g001040 Amaranthus hybridus HOM05D008090 ORTHO05D010156 8.2e-25 118.2 234 37.6
ECA234G1353 Erigeron canadensis HOM05D008090 ORTHO05D010156 4.1e-24 115.9 237 38.4
SGA_v2.0_scaffold1G00152 Striga asiatica HOM05D008090 ORTHO05D010156 4.1e-24 115.9 244 38.1
Aqoxy4G00119 Aquilegia oxysepala HOM05D008090 ORTHO05D010156 1.2e-23 114.4 239 36.4
Oeu019949.1 Olea europaea HOM05D008090 ORTHO05D010156 4.5e-23 112.5 121 49.6
HanXRQChr17g0565011 Helianthus annuus HOM05D008090 ORTHO05D010156 1.9e-21 107.1 227 34.8
DCAR_003940 Daucus carota HOM05D000013 ORTHO05D010156 1.2e-20 104.4 170 41.2
MBI19_g47931_MAGBIO Magnolia biondii HOM05D008090 ORTHO05D010156 1.7e-17 94.0 197 41.1
Nitab4.5_0006300g0040 Nicotiana tabacum HOM05D008090 ORTHO05D010156 3.7e-17 92.8 180 40.6
Os01g0243600 Oryza sativa ssp. japonica HOM05D008090 ORTHO05D010156 1.2e-15 87.8 238 32.8
Ciclev10027155m.g Citrus clementina HOM05D008090 ORTHO05D010156 5.0e-14 82.4 224 34.4
Actinidia19510 Actinidia chinensis HOM05D008090 ORTHO05D010156 3.6e-12 76.3 145 42.1
Zm00001eb079770 Zea mays HOM05D008090 ORTHO05D010156 1.0e-11 74.7 87 47.1
PGSC0003DMG400008321 Solanum tuberosum HOM05D008090 ORTHO05D010156 5.2e-11 72.4 73 58.9
SEGI_25907 Sequoiadendron giganteum HOM05D008090 ORTHO05D010156 3.7e-09 66.2 226 27.9
Sopen02g020000 Solanum pennellii HOM05D008090 ORTHO05D010156 4.9e-09 65.9 169 34.3
Atru.chr10.1349 Acer truncatum HOM05D008090 ORTHO05D010156 5.4e-08 62.4 87 48.3
ATR0681G183 Amborella trichopoda HOM05D008090 ORTHO05D010156 4.5e-07 59.3 234 29.9


User provided reference genes

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