Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p057193 Quercus lobata HOM05D003351 ORTHO05D003806 7.7e-103 377.1 182 100.0
QL08p048991 Quercus lobata HOM05D003351 ORTHO05D003806 1.5e-53 213.4 152 71.7
QL08p048969 Quercus lobata HOM05D003351 ORTHO05D003806 2.3e-51 206.1 152 69.1
Haze_15492 Corylus avellana HOM05D003351 ORTHO05D003806 2.7e-47 192.6 152 64.5
CiPaw.01G060600 Carya illinoinensis HOM05D003351 ORTHO05D003806 8.6e-46 187.6 152 63.8
CSS0020727 Camellia sinensis var. sinensis HOM05D003351 ORTHO05D003806 1.1e-45 187.2 152 63.2
GSVIVG01026913001 Vitis vinifera HOM05D003351 ORTHO05D003806 2.1e-44 183.0 152 62.5
Sed0024794 Sechium edule HOM05D003351 ORTHO05D003806 2.8e-44 182.6 163 59.5
Nitab4.5_0005277g0030 Nicotiana tabacum HOM05D003351 ORTHO05D003806 1.1e-43 180.6 152 61.2
SalBow5G0930 Salvia bowleyana HOM05D003351 ORTHO05D003806 1.4e-43 180.3 152 61.2
SalBow5G3927 Salvia bowleyana HOM05D003351 ORTHO05D003806 1.4e-43 180.3 152 61.2
Peaxi162Scf00020g00237 Petunia axillaris HOM05D003351 ORTHO05D003806 1.8e-43 179.9 145 60.7
TWI59G0062 Tripterygium wilfordii HOM05D003351 ORTHO05D003806 3.1e-43 179.1 151 60.9
MELO3C006113.2 Cucumis melo HOM05D003351 ORTHO05D003806 4.0e-43 178.7 156 60.9
Rhsim13G0014400 Rhododendron simsii HOM05D003351 ORTHO05D003806 4.0e-43 178.7 152 60.5
Lsat_1_v5_gn_7_4420 Lactuca sativa HOM05D003351 ORTHO05D003806 5.2e-43 178.3 152 61.2
Nitab4.5_0008002g0030 Nicotiana tabacum HOM05D003351 ORTHO05D003806 5.2e-43 178.3 145 60.7
CsaV3_3G008950 Cucumis sativus L. HOM05D003351 ORTHO05D003806 1.2e-42 177.2 156 60.3
MSTRG.4857 Avicennia marina HOM05D003351 ORTHO05D003806 1.5e-42 176.8 152 59.9
Actinidia33422 Actinidia chinensis HOM05D003351 ORTHO05D003806 2.6e-42 176.0 152 60.5
CANSAT56G4221 Cannabis sativa HOM05D003351 ORTHO05D003806 2.6e-42 176.0 152 60.5
Dinv43809 Davidia involucrata HOM05D003351 ORTHO05D003806 2.6e-42 176.0 152 60.5
Sed0019127 Sechium edule HOM05D003351 ORTHO05D003806 2.6e-42 176.0 161 59.0
CAN.G78.58 Capsicum annuum HOM05D003351 ORTHO05D003806 9.8e-42 174.1 139 62.6
Manes.05G035200 Manihot esculenta HOM05D003351 ORTHO05D003806 1.3e-41 173.7 152 57.9
Sabra14G0060600 Salix brachista HOM05D003351 ORTHO05D003806 1.7e-41 173.3 139 62.6
BcaB03g13607 Brassica carinata HOM05D003351 ORTHO05D003806 2.2e-41 172.9 152 58.6
BolC5t28825H Brassica oleracea HOM05D003351 ORTHO05D003806 2.2e-41 172.9 152 58.6
arahy.Tifrunner.gnm1.ann1.M409IX Arachis hypogaea HOM05D000404 ORTHO05D002003 2.9e-41 172.6 152 57.9
arahy.Tifrunner.gnm1.ann1.UANN5Y Arachis hypogaea HOM05D003351 ORTHO05D003806 3.7e-41 172.2 152 57.9
Lj1g0000541 Lotus japonicus HOM05D003351 ORTHO05D003806 3.7e-41 172.2 152 59.9
Phvul.008G065700 Phaseolus vulgaris HOM05D003351 ORTHO05D003806 3.7e-41 172.2 152 58.6
Thhalv10007689m.g Eutrema salsugineum HOM05D003351 ORTHO05D003806 4.9e-41 171.8 152 57.9
Potri.014G083300 Populus trichocarpa HOM05D003351 ORTHO05D003806 4.9e-41 171.8 139 61.2
ECA236G4888 Erigeron canadensis HOM05D003351 ORTHO05D003806 6.4e-41 171.4 152 57.9
Solyc01g094550.3 Solanum lycopersicum HOM05D003351 ORTHO05D003806 6.4e-41 171.4 147 59.2
Sopen01g038360 Solanum pennellii HOM05D003351 ORTHO05D003806 6.4e-41 171.4 147 59.2
Sp1g00600 Schrenkiella parvula HOM05D003351 ORTHO05D003806 1.1e-40 170.6 152 57.2
AL1G10650 Arabidopsis lyrata HOM05D003351 ORTHO05D003806 1.4e-40 170.2 152 57.2
ClCG05G001560 Citrullus lanatus HOM05D003351 ORTHO05D003806 1.4e-40 170.2 156 59.0
Carub.0001s0050 Capsella rubella HOM05D003351 ORTHO05D003806 1.9e-40 169.9 152 57.2
THA.LOC104814102 Tarenaya hassleriana HOM05D003351 ORTHO05D003806 1.9e-40 169.9 156 56.4
HanXRQChr06g0170081 Helianthus annuus HOM05D003351 ORTHO05D003806 2.4e-40 169.5 152 59.2
BraA10t42310Z Brassica rapa HOM05D003351 ORTHO05D003806 4.1e-40 168.7 152 57.2
Cpa.g.sc18.250 Carica papaya HOM05D003351 ORTHO05D003806 7.1e-40 167.9 151 55.6
Migut.N01442 Erythranthe guttata HOM05D003351 ORTHO05D003806 1.2e-39 167.2 156 57.7
HanXRQChr04g0121601 Helianthus annuus HOM05D003351 ORTHO05D003806 1.6e-39 166.8 152 57.2
DCAR_015970 Daucus carota HOM05D003351 ORTHO05D003806 2.1e-39 166.4 152 54.6
Oeu037304.1 Olea europaea HOM05D003351 ORTHO05D003806 2.1e-39 166.4 143 58.7
Oeu037305.1 Olea europaea HOM05D003351 ORTHO05D003806 2.7e-39 166.0 142 59.2
AT1G01710 Arabidopsis thaliana HOM05D003351 ORTHO05D003806 3.5e-39 165.6 152 55.9
DCAR_025188 Daucus carota HOM05D003351 ORTHO05D003806 3.5e-39 165.6 161 52.8
Lj9A583T62 Lonicera japonica HOM05D003351 ORTHO05D003806 4.6e-39 165.2 127 64.6
Nn6g33439 Nelumbo nucifera HOM05D003351 ORTHO05D003806 4.6e-39 165.2 152 57.9
Aa31LG1G11070 Aethionema arabicum HOM05D003351 ORTHO05D003806 7.8e-39 164.5 151 55.6
Cc02_g37920 Coffea canephora HOM05D003351 ORTHO05D003806 7.8e-39 164.5 156 55.8
Lalb_Chr19g0126951 Lupinus albus HOM05D003351 ORTHO05D003806 1.3e-38 163.7 139 59.7
Duzib133G0362 Durio zibethinus HOM05D003351 ORTHO05D003806 1.7e-38 163.3 155 54.2
Glyma.18G232000 Glycine max HOM05D003351 ORTHO05D003806 1.7e-38 163.3 152 56.6
CARHR000630 Cardamine hirsuta HOM05D003351 ORTHO05D003806 2.3e-38 162.9 152 54.6
unitig_22.g6719 Utricularia gibba HOM05D003351 ORTHO05D003806 2.3e-38 162.9 154 55.2
Ca_07910_v3 Cicer arietinum L. HOM05D003351 ORTHO05D003806 3.0e-38 162.5 152 53.3
RcHm_v2.0_Chr1g0355121 Rosa chinensis HOM05D003351 ORTHO05D003806 3.0e-38 162.5 152 58.6
Duzib138G1725 Durio zibethinus HOM05D003351 ORTHO05D003806 3.9e-38 162.2 155 54.8
PGSC0003DMG400000166 Solanum tuberosum HOM05D003351 ORTHO05D003806 6.6e-38 161.4 139 57.6
SGA_v2.0_scaffold43G16419 Striga asiatica HOM05D003351 ORTHO05D003806 6.6e-38 161.4 152 54.6
Solyc01g094530.4 Solanum lycopersicum HOM05D003351 ORTHO05D003806 2.5e-37 159.5 139 57.6
Sopen01g038340 Solanum pennellii HOM05D003351 ORTHO05D003806 2.5e-37 159.5 139 57.6
Aqoxy7G00326 Aquilegia oxysepala HOM05D003351 ORTHO05D003806 4.3e-37 158.7 151 54.3
DCAR_006927 Daucus carota HOM05D003351 ORTHO05D003806 4.3e-37 158.7 152 52.6
Gohir.D11G092700 Gossypium hirsutum HOM05D003351 ORTHO05D003806 7.3e-37 157.9 155 54.2
Gohir.A11G088400 Gossypium hirsutum HOM05D003351 ORTHO05D003806 9.5e-37 157.5 155 54.2
Sc23g0002940 Simmondsia chinensis HOM05D003351 ORTHO05D003806 9.5e-37 157.5 151 52.3
TPR.G37800 Trifolium pratense HOM05D003351 ORTHO05D003806 9.5e-37 157.5 139 57.6
FvH4_7g14192 Fragaria vesca HOM05D003351 ORTHO05D003806 2.1e-36 156.4 152 57.2
FAN06G3044 Fragaria x ananassa HOM05D003351 ORTHO05D003806 2.1e-36 156.4 152 57.2
FAN06G4684 Fragaria x ananassa HOM05D003351 ORTHO05D003806 2.1e-36 156.4 152 57.2
CAN.G78.57 Capsicum annuum HOM05D003351 ORTHO05D003806 2.8e-36 156.0 144 53.5
Gorai.007G099000 Gossypium raimondii HOM05D003351 ORTHO05D003806 2.8e-36 156.0 155 53.5
Lalb_Chr19g0126941 Lupinus albus HOM05D003351 ORTHO05D003806 2.8e-36 156.0 139 56.1
Medtr7g077400 Medicago truncatula HOM05D003351 ORTHO05D003806 2.8e-36 156.0 139 56.8
EL10Ac1g00424 Beta vulgaris HOM05D003351 ORTHO05D003806 3.6e-36 155.6 145 50.3
Eucgr.E00141 Eucalyptus grandis HOM05D003351 ORTHO05D003806 3.6e-36 155.6 151 55.0
Thecc.01G360000 Theobroma cacao HOM05D003351 ORTHO05D003806 4.7e-36 155.2 155 52.3
COL.COLO4_12706 Corchorus olitorius HOM05D003351 ORTHO05D003806 6.2e-36 154.8 155 52.9
Medtr8g030920 Medicago truncatula HOM05D003351 ORTHO05D003806 8.1e-36 154.5 155 52.9
Ah.05g180660 Amaranthus hybridus HOM05D003351 ORTHO05D003806 1.8e-35 153.3 151 49.7
Psat0s3577g0160 Pisum sativum HOM05D003351 ORTHO05D003806 1.8e-35 153.3 139 55.4
Glyma.09G260200 Glycine max HOM05D003351 ORTHO05D003806 2.3e-35 152.9 127 62.2
Psat4g154520 Pisum sativum HOM05D003351 ORTHO05D003806 2.3e-35 152.9 155 50.3
AUR62022554 Chenopodium quinoa HOM05D003351 ORTHO05D003806 3.1e-35 152.5 144 52.1
TPR.G15034 Trifolium pratense HOM05D003351 ORTHO05D003806 3.1e-35 152.5 155 51.0
Atru.chr5.459 Acer truncatum HOM05D003351 ORTHO05D003806 4.0e-35 152.1 152 50.0
MD01G1058600 Malus domestica HOM05D003351 ORTHO05D003806 4.0e-35 152.1 152 54.6
Lj7A514T28 Lonicera japonica HOM05D003351 ORTHO05D003806 5.2e-35 151.8 171 48.5
Lalb_Chr17g0339681 Lupinus albus HOM05D003351 ORTHO05D003806 5.2e-35 151.8 141 54.6
Psat0s3577g0040 Pisum sativum HOM05D003351 ORTHO05D003806 6.8e-35 151.4 139 54.7
A10p00320 Brassica napus HOM05D003351 ORTHO05D003806 1.2e-34 150.6 127 59.1
C05p00330 Brassica napus HOM05D003351 ORTHO05D003806 1.2e-34 150.6 127 59.1
Ciclev10020242m.g Citrus clementina HOM05D003351 ORTHO05D003806 1.2e-34 150.6 152 53.3
FAN10G4309 Fragaria x ananassa HOM05D003351 ORTHO05D003806 1.2e-34 150.6 152 55.9
Sp6g00550 Schrenkiella parvula HOM05D003351 ORTHO05D003806 3.4e-34 149.1 138 54.3
CDE11G0862 Ceratophyllum demersum HOM05D003351 ORTHO05D003806 5.8e-34 148.3 155 47.7
Glyma.03G009800 Glycine max HOM05D003351 ORTHO05D003806 7.6e-34 147.9 155 51.0
PSO782G5283 Papaver somniferum HOM05D003351 ORTHO05D003806 9.9e-34 147.5 151 51.0
PSO478G5134 Papaver somniferum HOM05D003351 ORTHO05D003806 1.3e-33 147.1 151 51.0
Psat0s3832g0080 Pisum sativum HOM05D003351 ORTHO05D003806 2.2e-33 146.4 140 50.7
VMungo0331G1844 Vigna mungo HOM05D003351 ORTHO05D003806 4.9e-33 145.2 155 51.0
Glyma.07G071300 Glycine max HOM05D003351 ORTHO05D003806 6.4e-33 144.8 147 52.4
Psat0s3832g0040 Pisum sativum HOM05D003351 ORTHO05D003806 6.4e-33 144.8 128 55.5
Phvul.010G098200 Phaseolus vulgaris HOM05D003351 ORTHO05D003806 8.4e-33 144.4 155 49.7
BcaB01g02157 Brassica carinata HOM05D003351 ORTHO05D003806 2.4e-32 142.9 151 47.7
AT4G00520 Arabidopsis thaliana HOM05D003351 ORTHO05D003806 7.1e-32 141.4 152 49.3
MD01G1058300 Malus domestica HOM05D003351 ORTHO05D003806 7.8e-31 137.9 155 51.6
ATR0680G356 Amborella trichopoda HOM05D003351 ORTHO05D003806 1.0e-30 137.5 151 47.7
BcaNung05354 Brassica carinata HOM05D003351 ORTHO05D003806 6.6e-30 134.8 138 47.1
BolC3t16188H Brassica oleracea HOM05D003351 ORTHO05D003806 6.6e-30 134.8 138 47.1
A03p32150 Brassica napus HOM05D003351 ORTHO05D003806 1.5e-29 133.7 138 46.4
BraA03t12385Z Brassica rapa HOM05D003351 ORTHO05D003806 1.5e-29 133.7 138 46.4
C03p39170 Brassica napus HOM05D003351 ORTHO05D003806 2.5e-29 132.9 138 46.4
AL6G52960 Arabidopsis lyrata HOM05D003351 ORTHO05D003806 4.3e-29 132.1 132 53.0
Os04g0558400 Oryza sativa ssp. japonica HOM05D003351 ORTHO05D003806 4.3e-29 132.1 144 46.5
Aa31LG5G470 Aethionema arabicum HOM05D003351 ORTHO05D003806 5.6e-29 131.7 152 50.0
PSO478G2412 Papaver somniferum HOM05D003351 ORTHO05D003806 3.6e-28 129.0 142 47.2
Carub.0006s3675 Capsella rubella HOM05D003351 ORTHO05D003806 8.1e-28 127.9 152 46.1
TAR374G1710 Trochodendron aralioides HOM05D003351 ORTHO05D003806 2.4e-27 126.3 128 49.2
Manes.01G257800 Manihot esculenta HOM05D003351 ORTHO05D003806 6.9e-27 124.8 152 46.7
HanXRQChr06g0170071 Helianthus annuus HOM05D003351 ORTHO05D003806 1.5e-26 123.6 147 45.6
PSO782G2636 Papaver somniferum HOM05D003351 ORTHO05D003806 4.4e-26 122.1 147 44.2
HPP92_008506 Vanilla planifolia HOM05D003351 ORTHO05D003806 1.3e-25 120.6 143 44.8
PSO782G0254 Papaver somniferum HOM05D003351 ORTHO05D003806 1.7e-25 120.2 147 42.9
BcaC03g16040 Brassica carinata HOM05D003351 ORTHO05D003806 2.9e-25 119.4 151 44.4
PSO478G3804 Papaver somniferum HOM05D003351 ORTHO05D003806 4.9e-25 118.6 147 42.2
C02p38000 Brassica napus HOM05D003351 ORTHO05D003806 6.4e-25 118.2 146 45.9
BolC2t09816H Brassica oleracea HOM05D003351 ORTHO05D003806 6.4e-25 118.2 146 45.9
Thhalv10029128m.g Eutrema salsugineum HOM05D003351 ORTHO05D003806 6.4e-25 118.2 103 57.3
A02p24120 Brassica napus HOM05D003351 ORTHO05D003806 8.4e-25 117.9 151 44.4
BraA02t07405Z Brassica rapa HOM05D003351 ORTHO05D003806 8.4e-25 117.9 151 44.4
Prupe.2G169700 Prunus persica HOM05D003351 ORTHO05D003806 1.1e-24 117.5 104 55.8
SEGI_22600 Sequoiadendron giganteum HOM05D003351 ORTHO05D003806 1.9e-24 116.7 148 43.2
HanXRQChr04g0121591 Helianthus annuus HOM05D003351 ORTHO05D003806 5.4e-24 115.2 147 44.9
Aa31LG5G460 Aethionema arabicum HOM05D003351 ORTHO05D003806 7.1e-24 114.8 151 41.7
CiPaw.01G060400 Carya illinoinensis HOM05D003351 ORTHO05D003806 4.6e-23 112.1 133 48.9
AUR62004348 Chenopodium quinoa HOM05D003351 ORTHO05D003806 4.6e-23 112.1 91 57.1
PGSC0003DMG400000200 Solanum tuberosum HOM05D003351 ORTHO05D003806 6.0e-23 111.7 133 47.4
Zm00001eb429310 Zea mays HOM05D003351 ORTHO05D003806 1.7e-22 110.2 175 38.3
BcaB01g02197 Brassica carinata HOM05D003351 ORTHO05D003806 2.5e-21 106.3 147 42.2
PSO063G6511 Papaver somniferum HOM05D003351 ORTHO05D003806 3.3e-21 105.9 136 41.2
Ca_23637_v3 Cicer arietinum L. HOM05D003351 ORTHO05D003806 5.6e-21 105.1 88 54.5
BcaC01g06871 Brassica carinata HOM05D003351 ORTHO05D003806 6.2e-20 101.7 86 53.5
arahy.Tifrunner.gnm1.ann1.KX913X Arachis hypogaea HOM05D003351 ORTHO05D003806 8.1e-20 101.3 87 55.2
vmacro23203 Vaccinium macrocarpon HOM05D003351 ORTHO05D003806 6.4e-17 91.7 161 39.8
CARHR248670 Cardamine hirsuta HOM05D003351 ORTHO05D003806 3.5e-15 85.9 86 51.2
PGSC0003DMG400000037 Solanum tuberosum HOM05D003351 ORTHO05D003806 1.0e-14 84.3 61 67.2
Hund27283 Selenicereus undatus HOM05D003351 ORTHO05D003806 3.9e-14 82.4 76 55.3
Lsat_1_v5_gn_7_4460 Lactuca sativa HOM05D003351 ORTHO05D003806 5.1e-14 82.0 121 39.7
SMO147G0381 Selaginella moellendorffii HOM05D003351 ORTHO05D003806 8.7e-14 81.3 139 35.3
Pp3c14_7450 Physcomitrium patens HOM05D003351 ORTHO05D003806 1.6e-12 77.0 89 46.1
SMO273G0019 Selaginella moellendorffii HOM05D003351 ORTHO05D003806 1.6e-12 77.0 95 40.0
AagrBONN_evm.TU.Sc2ySwM_228.1010 Anthoceros agrestis HOM05D003351 ORTHO05D003806 1.2e-10 70.9 88 43.2
SHI13440 Sapria himalayana HOM05D003351 ORTHO05D003806 5.8e-10 68.6 110 40.9
Pp3c12_25760 Physcomitrium patens HOM05D003351 ORTHO05D003806 7.6e-10 68.2 93 39.8
arahy.Tifrunner.gnm1.ann1.6AK6JC Arachis hypogaea HOM05D003351 ORTHO05D003806 9.9e-10 67.8 35 80.0
Mapoly0016s0008 Marchantia polymorpha HOM05D003351 ORTHO05D003806 1.3e-09 67.4 130 32.3
SMO147G0196 Selaginella moellendorffii HOM05D003351 ORTHO05D003806 1.3e-09 67.4 114 33.3
Glyma.18G232100 Glycine max HOM05D003351 ORTHO05D003806 2.2e-09 66.6 75 46.7
arahy.Tifrunner.gnm1.ann1.ZVY5TW Arachis hypogaea HOM05D003351 ORTHO05D003806 3.8e-09 65.9 34 79.4
Glyma.18G232200 Glycine max HOM05D003351 ORTHO05D003806 6.4e-09 65.1 35 80.0
AagrBONN_evm.TU.Sc2ySwM_228.998 Anthoceros agrestis HOM05D003351 ORTHO05D003806 1.9e-08 63.5 83 44.6
Pp3c10_19190 Physcomitrium patens HOM05D003351 ORTHO05D003806 1.3e-06 57.4 141 31.2


User provided reference genes

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