Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p056259 Quercus lobata HOM05D006477 ORTHO05D008311 3.6e-62 241.5 129 100.0
QL05p054895 Quercus lobata HOM05D006477 ORTHO05D008311 7.5e-36 154.1 82 98.8
QL05p056339 Quercus lobata HOM05D006477 ORTHO05D008311 7.5e-36 154.1 82 98.8
MELO3C020371.2 Cucumis melo HOM05D006477 ORTHO05D008311 1.8e-34 149.4 82 92.7
ClCG06G008130 Citrullus lanatus HOM05D006477 ORTHO05D008311 2.0e-33 146.0 82 89.0
Cfa003675 Carpinus fangiana HOM05D006477 ORTHO05D008311 4.5e-33 144.8 82 91.5
Haze_15813 Corylus avellana HOM05D006477 ORTHO05D008311 1.0e-32 143.7 82 90.2
Actinidia05816 Actinidia chinensis HOM05D006477 ORTHO05D008311 2.9e-32 142.1 82 87.8
FvH4_7g07070 Fragaria vesca HOM05D006477 ORTHO05D008311 2.9e-32 142.1 80 91.2
FAN06G1803 Fragaria x ananassa HOM05D006477 ORTHO05D008311 2.9e-32 142.1 80 91.2
FAN03G3069 Fragaria x ananassa HOM05D006477 ORTHO05D029725 5.0e-32 141.4 80 90.0
FAN10G2338 Fragaria x ananassa HOM05D006477 ORTHO05D008311 5.0e-32 141.4 80 91.2
Actinidia31748 Actinidia chinensis HOM05D006477 ORTHO05D008311 1.1e-31 140.2 82 87.8
QL03p061357 Quercus lobata HOM05D006477 ORTHO05D008311 1.1e-31 140.2 82 87.8
Cc02_g26330 Coffea canephora HOM05D006477 ORTHO05D008311 1.5e-31 139.8 82 87.8
CSS0043287 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 2.5e-31 139.0 82 85.4
CSS0025225 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 3.2e-31 138.7 82 85.4
Manes.06G016700 Manihot esculenta HOM05D006477 ORTHO05D008311 3.2e-31 138.7 82 85.4
Manes.06G016750 Manihot esculenta HOM05D006477 ORTHO05D008311 3.2e-31 138.7 82 85.4
Potri.005G094100 Populus trichocarpa HOM05D006477 ORTHO05D008311 3.2e-31 138.7 82 84.1
Eucgr.E04248 Eucalyptus grandis HOM05D006477 ORTHO05D008311 4.2e-31 138.3 82 85.4
Hma1.2p1_0915F.1_g236330 Hydrangea macrophylla HOM05D006477 ORTHO05D008311 5.5e-31 137.9 82 86.6
Rhsim07G0044200 Rhododendron simsii HOM05D006477 ORTHO05D008311 9.5e-31 137.1 82 84.1
RcHm_v2.0_Chr1g0337021 Rosa chinensis HOM05D006477 ORTHO05D008311 9.5e-31 137.1 82 86.6
SalBow6G6803 Salvia bowleyana HOM05D006477 ORTHO05D008311 9.5e-31 137.1 82 84.1
Hma1.2p1_2755F.1_g327960 Hydrangea macrophylla HOM05D006477 ORTHO05D008311 1.2e-30 136.7 82 85.4
Sabra05G0077900 Salix brachista HOM05D006477 ORTHO05D008311 1.2e-30 136.7 85 81.2
Rhsim07G0044700 Rhododendron simsii HOM05D006477 ORTHO05D008311 1.6e-30 136.3 82 82.9
TWI59G0878 Tripterygium wilfordii HOM05D006477 ORTHO05D008311 2.1e-30 136.0 82 82.9
CsaV3_2G011040 Cucumis sativus L. HOM05D006477 ORTHO05D008311 2.8e-30 135.6 74 91.9
Prupe.2G097300 Prunus persica HOM05D006477 ORTHO05D008311 2.8e-30 135.6 82 84.1
AUR62007820 Chenopodium quinoa HOM05D006477 ORTHO05D008311 4.7e-30 134.8 82 82.9
EL10Ac6g14607 Beta vulgaris HOM05D006477 ORTHO05D008311 6.1e-30 134.4 82 82.9
CiPaw.03G039600 Carya illinoinensis HOM05D006477 ORTHO05D008311 6.1e-30 134.4 82 82.9
Duzib128G0861 Durio zibethinus HOM05D006477 ORTHO05D008311 6.1e-30 134.4 90 77.8
MD07G1076600 Malus domestica HOM05D006477 ORTHO05D008311 6.1e-30 134.4 82 81.7
GSVIVG01001179001 Vitis vinifera HOM05D006477 ORTHO05D008311 6.1e-30 134.4 81 86.4
Nitab4.5_0004594g0090 Nicotiana tabacum HOM05D006477 ORTHO05D008311 8.0e-30 134.0 82 82.9
MBI04_g32195_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 1.4e-29 133.3 82 81.7
Medtr4g078485 Medicago truncatula HOM05D006477 ORTHO05D008311 1.8e-29 132.9 84 79.8
HanXRQChr15g0495711 Helianthus annuus HOM05D006477 ORTHO05D008311 2.3e-29 132.5 82 79.3
HanXRQChr16g0522681 Helianthus annuus HOM05D006477 ORTHO05D008311 2.3e-29 132.5 82 79.3
SGA_v2.0_scaffold120G32938 Striga asiatica HOM05D006477 ORTHO05D008311 2.3e-29 132.5 82 79.3
vmacro13578 Vaccinium macrocarpon HOM05D006477 ORTHO05D008311 2.3e-29 132.5 82 81.7
arahy.Tifrunner.gnm1.ann1.2E1B03 Arachis hypogaea HOM05D006477 ORTHO05D008311 4.0e-29 131.7 82 81.7
arahy.Tifrunner.gnm1.ann1.B2599V Arachis hypogaea HOM05D006477 ORTHO05D008311 4.0e-29 131.7 82 81.7
Thecc.07G155600 Theobroma cacao HOM05D006477 ORTHO05D008311 4.0e-29 131.7 90 77.8
PGR042G2475 Punica granatum HOM05D006477 ORTHO05D008311 5.2e-29 131.3 82 79.3
Rhsim07G0124700 Rhododendron simsii HOM05D006477 ORTHO05D008311 5.2e-29 131.3 82 80.5
COL.COLO4_15215 Corchorus olitorius HOM05D006477 ORTHO05D008311 6.8e-29 131.0 82 82.9
TPR.G24136 Trifolium pratense HOM05D006477 ORTHO05D008311 6.8e-29 131.0 87 77.0
Gohir.A12G270700 Gossypium hirsutum HOM05D006477 ORTHO05D008311 1.2e-28 130.2 82 80.5
Gohir.D12G271100 Gossypium hirsutum HOM05D006477 ORTHO05D008311 1.2e-28 130.2 82 80.5
Gorai.008G291500 Gossypium raimondii HOM05D006477 ORTHO05D008311 1.2e-28 130.2 82 80.5
MD02G1240300 Malus domestica HOM05D006477 ORTHO05D008311 1.5e-28 129.8 82 79.3
ATR0829G122 Amborella trichopoda HOM05D006477 ORTHO05D008311 2.0e-28 129.4 82 80.5
Migut.J00830 Erythranthe guttata HOM05D006477 ORTHO05D008311 2.0e-28 129.4 82 75.6
CAN.G700.29 Capsicum annuum HOM05D006477 ORTHO05D008311 3.4e-28 128.6 82 76.8
COL.COLO4_37808 Corchorus olitorius HOM05D006477 ORTHO05D008311 3.4e-28 128.6 82 81.7
TPR.G19239 Trifolium pratense HOM05D006477 ORTHO05D008311 3.4e-28 128.6 87 74.7
Lsat_1_v5_gn_4_40501 Lactuca sativa HOM05D006477 ORTHO05D008311 4.4e-28 128.3 82 76.8
HPP92_026480 Vanilla planifolia HOM05D006477 ORTHO05D008311 5.7e-28 127.9 82 76.8
Aqoxy7G00965 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 7.5e-28 127.5 84 78.6
PGSC0003DMG400001789 Solanum tuberosum HOM05D006477 ORTHO05D008311 7.5e-28 127.5 82 78.0
Ca_18942_v3 Cicer arietinum L. HOM05D006477 ORTHO05D008311 9.8e-28 127.1 87 75.9
Solyc01g081120.2 Solanum lycopersicum HOM05D006477 ORTHO05D008311 1.3e-27 126.7 82 78.0
Sopen01g032730 Solanum pennellii HOM05D006477 ORTHO05D008311 1.3e-27 126.7 82 78.0
Aqoxy7G00962 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 1.7e-27 126.3 81 80.2
ECA234G3546 Erigeron canadensis HOM05D006477 ORTHO05D008311 1.7e-27 126.3 82 75.6
Nitab4.5_0004800g0020 Nicotiana tabacum HOM05D006477 ORTHO05D008311 1.7e-27 126.3 82 80.5
Lj1g0022259 Lotus japonicus HOM05D006477 ORTHO05D008311 2.2e-27 125.9 82 76.8
MBI04_g32196_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 2.2e-27 125.9 82 75.6
SHI34920 Sapria himalayana HOM05D006477 ORTHO05D008311 2.2e-27 125.9 79 78.5
Aqoxy5G03392 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 8.3e-27 124.0 84 77.4
Aqoxy6G02884 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 8.3e-27 124.0 82 75.6
HanXRQChr17g0567251 Helianthus annuus HOM05D006477 ORTHO05D008311 1.1e-26 123.6 83 75.9
ECA234G1029 Erigeron canadensis HOM05D006477 ORTHO05D008311 4.1e-26 121.7 82 73.2
Cpa.g.sc53.139 Carica papaya HOM05D006477 ORTHO05D008311 5.4e-26 121.3 93 66.7
Lalb_Chr25g0285311 Lupinus albus HOM05D006477 ORTHO05D008311 7.0e-26 120.9 80 75.0
Phvul.010G094300 Phaseolus vulgaris HOM05D006477 ORTHO05D008311 1.2e-25 120.2 79 78.5
unitig_27.g24761 Utricularia gibba HOM05D006477 ORTHO05D008311 3.5e-25 118.6 82 74.4
PSO017G7014 Papaver somniferum HOM05D006477 ORTHO05D008311 5.9e-25 117.9 72 80.6
Glyma.12G115400 Glycine max HOM05D006477 ORTHO05D008311 1.0e-24 117.1 79 77.2
Glyma.06G291500 Glycine max HOM05D006477 ORTHO05D008311 2.3e-24 115.9 79 75.9
Phvul.011G119800 Phaseolus vulgaris HOM05D006477 ORTHO05D008311 2.9e-24 115.5 77 75.3
THA.LOC104823802 Tarenaya hassleriana HOM05D006477 ORTHO05D008311 1.1e-23 113.6 80 71.2
Ciclev10023972m.g Citrus clementina HOM05D006477 ORTHO05D008311 3.3e-23 112.1 80 72.5
SEGI_06535 Sequoiadendron giganteum HOM05D006477 ORTHO05D008311 3.3e-23 112.1 82 68.3
AL2G19670 Arabidopsis lyrata HOM05D006477 ORTHO05D008311 4.3e-23 111.7 80 70.0
Carub.0002s1025 Capsella rubella HOM05D006477 ORTHO05D008311 4.3e-23 111.7 80 70.0
Zm00001eb326860 Zea mays HOM05D006477 ORTHO05D008311 7.3e-23 110.9 84 70.2
AT1G65032 Arabidopsis thaliana HOM05D006477 ORTHO05D008311 1.2e-22 110.2 80 68.8
Os02g0695700 Oryza sativa ssp. japonica HOM05D006477 ORTHO05D008311 2.8e-22 109.0 79 69.6
Sp5g22520 Schrenkiella parvula HOM05D006477 ORTHO05D008311 1.0e-21 107.1 78 67.9
BcaNung05073 Brassica carinata HOM05D006477 ORTHO05D008311 1.4e-21 106.7 78 66.7
C06p42740 Brassica napus HOM05D006477 ORTHO05D008311 2.3e-21 105.9 78 64.1
C06p42790 Brassica napus HOM05D006477 ORTHO05D008311 2.3e-21 105.9 78 64.1
BolC6t39165H Brassica oleracea HOM05D006477 ORTHO05D008311 2.3e-21 105.9 78 64.1
Zm00001eb251360 Zea mays HOM05D006477 ORTHO05D008311 2.3e-21 105.9 79 67.1
A07p34050 Brassica napus HOM05D006477 ORTHO05D008311 3.0e-21 105.5 78 64.1
Thhalv10019379m.g Eutrema salsugineum HOM05D006477 ORTHO05D008311 4.0e-21 105.1 78 65.4
BraA07t31031Z Brassica rapa HOM05D006477 ORTHO05D008311 8.9e-21 104.0 78 62.8
C06p41870 Brassica napus HOM05D006477 ORTHO05D008311 1.5e-20 103.2 78 64.1
BolC6t39243H Brassica oleracea HOM05D006477 ORTHO05D008311 1.5e-20 103.2 78 64.1
Atru.chr3.3240 Acer truncatum HOM05D006477 ORTHO05D008311 4.4e-20 101.7 82 65.9
DCAR_024347 Daucus carota HOM05D006477 ORTHO05D008311 4.4e-20 101.7 60 83.3
Os04g0624900 Oryza sativa ssp. japonica HOM05D006477 ORTHO05D008311 5.4e-18 94.7 75 65.3
CSS0008051 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 9.2e-18 94.0 82 64.6
Pp3c3_2840 Physcomitrium patens HOM05D006477 ORTHO05D008311 9.2e-18 94.0 82 58.5
Sed0027346 Sechium edule HOM05D006477 ORTHO05D008311 1.2e-17 93.6 51 88.2
Mapoly0009s0212 Marchantia polymorpha HOM05D006477 ORTHO05D008311 7.8e-17 90.9 82 56.1
Peaxi162Scf00592g00428 Petunia axillaris HOM05D000001 ORTHO05D000003 2.5e-15 85.9 57 75.4
Psat0s466g0120 Pisum sativum HOM05D006477 ORTHO05D008311 1.6e-14 83.2 60 68.3
BcaC08g46243 Brassica carinata HOM05D006477 ORTHO05D008311 2.8e-14 82.4 78 56.4
Thhalv10019610m.g Eutrema salsugineum HOM05D006477 ORTHO05D008311 2.8e-14 82.4 64 64.1
Psat7g168960 Pisum sativum HOM05D006477 ORTHO05D008311 2.8e-14 82.4 60 68.3
MBI16_g31701_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 1.1e-13 80.5 60 68.3
arahy.Tifrunner.gnm1.ann1.HM6XW1 Arachis hypogaea HOM05D006477 ORTHO05D008311 1.8e-13 79.7 70 62.9
BcaB03g15190 Brassica carinata HOM05D006477 ORTHO05D008311 1.8e-13 79.7 54 70.4
SGA_v2.0_scaffold195G40833 Striga asiatica HOM05D006477 ORTHO05D404429 2.3e-13 79.3 61 67.2
Rhsim13G0110700 Rhododendron simsii HOM05D006477 ORTHO05D008311 1.2e-09 67.0 41 82.9
PSO017G6472 Papaver somniferum HOM05D006477 ORTHO05D008311 6.0e-09 64.7 48 64.6
PSO017G6604 Papaver somniferum HOM05D006477 ORTHO05D008311 6.0e-09 64.7 48 64.6
Sc21g0001600 Simmondsia chinensis HOM05D006477 ORTHO05D008311 1.0e-08 63.9 40 80.0


User provided reference genes

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