Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p054729 Quercus lobata HOM05D006079 ORTHO05D338210 7.9e-55 216.9 109 100.0
GSVIVG01034026001 Vitis vinifera HOM05D006079 ORTHO05D008156 3.7e-12 75.1 60 65.0
QL07p036333 Quercus lobata HOM05D006079 ORTHO05D008156 1.1e-11 73.6 53 69.8
Haze_20934 Corylus avellana HOM05D006079 ORTHO05D008156 1.9e-11 72.8 52 71.2
Prupe.6G269000 Prunus persica HOM05D006079 ORTHO05D008156 1.2e-10 70.1 51 72.5
FvH4_6g12250 Fragaria vesca HOM05D006079 ORTHO05D008156 1.6e-10 69.7 60 63.3
FAN09G0680 Fragaria x ananassa HOM05D006079 ORTHO05D008156 1.6e-10 69.7 60 63.3
FAN14G2872 Fragaria x ananassa HOM05D006079 ORTHO05D008156 1.6e-10 69.7 60 63.3
Cfa017268 Carpinus fangiana HOM05D006079 ORTHO05D008156 2.0e-10 69.3 52 67.3
CiPaw.10G153700 Carya illinoinensis HOM05D006079 ORTHO05D008156 1.0e-09 67.0 53 67.9
FAN02G2404 Fragaria x ananassa HOM05D006079 ORTHO05D008156 1.0e-09 67.0 60 61.7
FAN05G0163 Fragaria x ananassa HOM05D006079 ORTHO05D008156 1.0e-09 67.0 60 61.7
RcHm_v2.0_Chr3g0464051 Rosa chinensis HOM05D006079 ORTHO05D008156 1.0e-09 67.0 60 63.3
Duzib093G0682 Durio zibethinus HOM05D006079 ORTHO05D008156 1.7e-09 66.2 52 63.5
Thecc.05G024000 Theobroma cacao HOM05D006079 ORTHO05D008156 1.7e-09 66.2 52 63.5
Duzib128G0993 Durio zibethinus HOM05D006079 ORTHO05D008156 6.6e-09 64.3 51 64.7
MD04G1144700 Malus domestica HOM05D006079 ORTHO05D008156 6.6e-09 64.3 52 61.5
Hma1.2p1_0763F.1_g214490 Hydrangea macrophylla HOM05D006079 ORTHO05D008156 1.1e-08 63.5 53 62.3
Dinv35521 Davidia involucrata HOM05D006079 ORTHO05D008156 1.5e-08 63.2 52 63.5
Actinidia13795 Actinidia chinensis HOM05D006079 ORTHO05D008156 3.3e-08 62.0 55 65.5
PGR031G3170 Punica granatum HOM05D006079 ORTHO05D008156 5.6e-08 61.2 60 55.0
Ciclev10011790m.g Citrus clementina HOM05D006079 ORTHO05D008156 7.3e-08 60.8 52 59.6
Manes.08G086700 Manihot esculenta HOM05D006079 ORTHO05D008156 7.3e-08 60.8 52 61.5
Gohir.A13G086740 Gossypium hirsutum HOM05D006079 ORTHO05D008156 9.5e-08 60.5 52 57.7
Gohir.D13G085200 Gossypium hirsutum HOM05D006079 ORTHO05D008156 9.5e-08 60.5 52 57.7
MD12G1158600 Malus domestica HOM05D006079 ORTHO05D008156 9.5e-08 60.5 52 63.5
Gohir.D04G127900 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.2e-07 60.1 52 59.6
Gorai.012G110900 Gossypium raimondii HOM05D006079 ORTHO05D008156 1.2e-07 60.1 52 59.6
Actinidia29142 Actinidia chinensis HOM05D006079 ORTHO05D008156 3.6e-07 58.5 53 62.3
CSS0045639 Camellia sinensis var. sinensis HOM05D006079 ORTHO05D008156 4.7e-07 58.2 53 60.4
CANSAT35G1087 Cannabis sativa HOM05D006079 ORTHO05D008156 4.7e-07 58.2 47 68.1
Gohir.D09G137350 Gossypium hirsutum HOM05D006079 ORTHO05D008156 4.7e-07 58.2 52 57.7
Gorai.006G157700 Gossypium raimondii HOM05D006079 ORTHO05D008156 4.7e-07 58.2 52 57.7
Atru.chr8.2129 Acer truncatum HOM05D006079 ORTHO05D008156 6.2e-07 57.8 53 60.4
Gohir.A04G087500 Gossypium hirsutum HOM05D006079 ORTHO05D008156 6.2e-07 57.8 52 57.7
Nn2g13580 Nelumbo nucifera HOM05D006079 ORTHO05D008156 8.0e-07 57.4 60 58.3
Cpa.g.sc56.97 Carica papaya HOM05D006079 ORTHO05D008156 1.4e-06 56.6 52 61.5
TAR633G1690 Trochodendron aralioides HOM05D006079 ORTHO05D008156 1.4e-06 56.6 50 58.0
MSTRG.5605 Avicennia marina HOM05D006079 ORTHO05D008156 1.8e-06 56.2 48 62.5
Lj2A83T75 Lonicera japonica HOM05D006079 ORTHO05D008156 3.1e-06 55.5 52 61.5
COL.COLO4_14632 Corchorus olitorius HOM05D006079 ORTHO05D008156 4.0e-06 55.1 52 53.8
DCAR_024040 Daucus carota HOM05D006079 ORTHO05D008156 5.2e-06 54.7 52 53.8
Glyma.07G143100 Glycine max HOM05D006079 ORTHO05D008156 5.2e-06 54.7 51 58.8
Psat3g135200 Pisum sativum HOM05D006079 ORTHO05D008156 5.2e-06 54.7 56 57.1


User provided reference genes

Program Settings