Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p054694 Quercus lobata HOM05D000808 ORTHO05D000863 1.6e-32 142.1 72 100.0
QL05p054725 Quercus lobata HOM05D000808 ORTHO05D000863 1.2e-22 109.4 72 75.0
QL05p054758 Quercus lobata HOM05D000808 ORTHO05D000863 3.4e-22 107.8 72 75.0
QL05p039911 Quercus lobata HOM05D000808 ORTHO05D000863 3.4e-14 81.3 72 58.3
Cfa015708 Carpinus fangiana HOM05D000808 ORTHO05D000863 4.2e-12 74.3 74 52.7
Lj2A392T41 Lonicera japonica HOM05D000808 ORTHO05D000863 3.6e-11 71.2 70 47.1
Dinv38819 Davidia involucrata HOM05D000808 ORTHO05D000863 7.9e-11 70.1 71 43.7
Haze_00806 Corylus avellana HOM05D000808 ORTHO05D000863 1.8e-10 68.9 72 48.6
Dinv01637 Davidia involucrata HOM05D000808 ORTHO05D000863 3.0e-10 68.2 71 42.3
Prupe.4G166700 Prunus persica HOM05D000808 ORTHO05D000863 3.0e-10 68.2 72 48.6
Cfa019554 Carpinus fangiana HOM05D000808 ORTHO05D000863 6.7e-10 67.0 75 45.3
Prupe.5G049700 Prunus persica HOM05D000808 ORTHO05D000863 8.8e-10 66.6 72 47.2
Lj7C557T18 Lonicera japonica HOM05D000808 ORTHO05D000863 1.1e-09 66.2 71 43.7
Aqoxy6G01528 Aquilegia oxysepala HOM05D000808 ORTHO05D000863 1.5e-09 65.9 72 41.7
Haze_09295 Corylus avellana HOM05D000808 ORTHO05D000863 1.5e-09 65.9 68 44.1
Haze_09303 Corylus avellana HOM05D000808 ORTHO05D000863 1.5e-09 65.9 68 44.1
Atru.chr11.2175 Acer truncatum HOM05D000808 ORTHO05D000863 3.3e-09 64.7 71 47.9
Atru.chr4.1058 Acer truncatum HOM05D000808 ORTHO05D000863 3.3e-09 64.7 73 46.6
RcHm_v2.0_Chr5g0018291 Rosa chinensis HOM05D000808 ORTHO05D000863 3.3e-09 64.7 72 54.2
TWI38G2192 Tripterygium wilfordii HOM05D000808 ORTHO05D000863 3.3e-09 64.7 64 50.0
Atru.chr3.1862 Acer truncatum HOM05D000808 ORTHO05D000863 4.3e-09 64.3 71 47.9
Hma1.2p1_0619F.1_g190420 Hydrangea macrophylla HOM05D000808 ORTHO05D000863 4.3e-09 64.3 71 40.8
Prupe.4G157000 Prunus persica HOM05D000808 ORTHO05D000863 4.3e-09 64.3 72 45.8
MD08G1210800 Malus domestica HOM05D000808 ORTHO05D000863 5.7e-09 63.9 77 48.1
MD11G1261400 Malus domestica HOM05D000808 ORTHO05D000863 5.7e-09 63.9 75 49.3
Atru.chr4.1031 Acer truncatum HOM05D000808 ORTHO05D000863 1.3e-08 62.8 71 47.9
Atru.chr4.1041 Acer truncatum HOM05D000808 ORTHO05D000863 1.3e-08 62.8 73 45.2
Potri.011G102200 Populus trichocarpa HOM05D000808 ORTHO05D000863 1.3e-08 62.8 68 55.9
Thecc.02G094800 Theobroma cacao HOM05D000808 ORTHO05D000863 1.3e-08 62.8 71 45.1
Hma1.2p1_0005F.1_g004480 Hydrangea macrophylla HOM05D000808 ORTHO05D000863 1.7e-08 62.4 73 43.8
vmacro20340 Vaccinium macrocarpon HOM05D000808 ORTHO05D426772 1.7e-08 62.4 70 44.3
CSS0018946 Camellia sinensis var. sinensis HOM05D000808 ORTHO05D000863 2.2e-08 62.0 71 42.3
ClCG11G017420 Citrullus lanatus HOM05D000808 ORTHO05D000863 2.2e-08 62.0 68 48.5
Atru.chr4.1052 Acer truncatum HOM05D000808 ORTHO05D000863 2.8e-08 61.6 71 46.5
TWI59G1229 Tripterygium wilfordii HOM05D000808 ORTHO05D000863 3.7e-08 61.2 67 49.3
TAR381G0386 Trochodendron aralioides HOM05D000808 ORTHO05D000863 3.7e-08 61.2 68 42.6
TAR381G0516 Trochodendron aralioides HOM05D000808 ORTHO05D000863 3.7e-08 61.2 68 42.6
Cfa015709 Carpinus fangiana HOM05D000808 ORTHO05D000863 4.8e-08 60.8 74 44.6
Haze_09313 Corylus avellana HOM05D000808 ORTHO05D000863 4.8e-08 60.8 76 42.1
Prupe.4G166900 Prunus persica HOM05D000808 ORTHO05D000863 4.8e-08 60.8 72 43.1
Haze_00807 Corylus avellana HOM05D000808 ORTHO05D000863 6.3e-08 60.5 72 47.2
vmacro21949 Vaccinium macrocarpon HOM05D000808 ORTHO05D000863 8.2e-08 60.1 70 42.9
Cfa011981 Carpinus fangiana HOM05D000808 ORTHO05D000863 1.4e-07 59.3 71 42.3
Hma1.2p1_0005F.1_g004470 Hydrangea macrophylla HOM05D000808 ORTHO05D000863 1.4e-07 59.3 73 43.8
Prupe.4G166600 Prunus persica HOM05D000808 ORTHO05D000863 1.8e-07 58.9 75 41.3
Rhsim03G0031800 Rhododendron simsii HOM05D000808 ORTHO05D000863 1.8e-07 58.9 70 48.6
Prupe.4G167000 Prunus persica HOM05D000808 ORTHO05D000863 2.4e-07 58.5 73 39.7
Cfa019542 Carpinus fangiana HOM05D000808 ORTHO05D000863 3.1e-07 58.2 69 40.6
FvH4_3g11080 Fragaria vesca HOM05D000808 ORTHO05D000863 3.1e-07 58.2 74 45.9
FAN11G0867 Fragaria x ananassa HOM05D000808 ORTHO05D000863 3.1e-07 58.2 74 45.9
FAN25G2598 Fragaria x ananassa HOM05D000808 ORTHO05D000863 4.1e-07 57.8 74 45.9
Rhsim02G0246600 Rhododendron simsii HOM05D000808 ORTHO05D000863 4.1e-07 57.8 71 42.3
Rhsim03G0031600 Rhododendron simsii HOM05D000808 ORTHO05D000863 4.1e-07 57.8 72 38.9
Actinidia22176 Actinidia chinensis HOM05D000808 ORTHO05D000863 5.3e-07 57.4 71 38.0
Duzib084G0391 Durio zibethinus HOM05D000808 ORTHO05D000863 6.9e-07 57.0 68 41.2
TAR381G0725 Trochodendron aralioides HOM05D000808 ORTHO05D000863 6.9e-07 57.0 68 39.7
TAR381G1129 Trochodendron aralioides HOM05D000808 ORTHO05D000863 6.9e-07 57.0 68 39.7
CSS0044045 Camellia sinensis var. sinensis HOM05D000808 ORTHO05D000863 9.1e-07 56.6 69 40.6
vmacro11336 Vaccinium macrocarpon HOM05D000808 ORTHO05D000863 9.1e-07 56.6 71 43.7
Potri.001G381000 Populus trichocarpa HOM05D000808 ORTHO05D000863 1.2e-06 56.2 71 47.9
Sed0019826 Sechium edule HOM05D000808 ORTHO05D000863 1.2e-06 56.2 66 45.5
Sopen12g012040 Solanum pennellii HOM05D000808 ORTHO05D000863 1.2e-06 56.2 70 40.0
Haze_09092 Corylus avellana HOM05D000808 ORTHO05D000863 1.5e-06 55.8 71 38.0
DCAR_017242 Daucus carota HOM05D000808 ORTHO05D000863 1.5e-06 55.8 70 37.1
PSO170G3732 Papaver somniferum HOM05D000808 ORTHO05D000863 1.5e-06 55.8 70 40.0
Sabra16G0251200 Salix brachista HOM05D000808 ORTHO05D000863 1.5e-06 55.8 67 46.3
Duzib205G1211 Durio zibethinus HOM05D000808 ORTHO05D000863 2.0e-06 55.5 68 38.2
PSO700G0166 Papaver somniferum HOM05D000808 ORTHO05D000863 2.0e-06 55.5 70 40.0
Rhsim03G0031700 Rhododendron simsii HOM05D000808 ORTHO05D000863 2.0e-06 55.5 71 40.8
PGSC0003DMG400008165 Solanum tuberosum HOM05D000808 ORTHO05D000863 2.0e-06 55.5 70 38.6
Actinidia39185 Actinidia chinensis HOM05D000808 ORTHO05D000863 2.6e-06 55.1 69 39.1
Cpa.g.sc14.253 Carica papaya HOM05D000808 ORTHO05D000863 2.6e-06 55.1 70 44.3
Nitab4.5_0000562g0040 Nicotiana tabacum HOM05D000808 ORTHO05D000863 2.6e-06 55.1 70 38.6
Thecc.10G121600 Theobroma cacao HOM05D000808 ORTHO05D000863 2.6e-06 55.1 70 44.3
COL.COLO4_10730 Corchorus olitorius HOM05D000808 ORTHO05D000863 3.4e-06 54.7 67 40.3
FvH4_3g11340 Fragaria vesca HOM05D000808 ORTHO05D000863 3.4e-06 54.7 73 49.3
Lj4C198T0 Lonicera japonica HOM05D000808 ORTHO05D000863 3.4e-06 54.7 70 35.7
Thecc.03G300900 Theobroma cacao HOM05D000808 ORTHO05D000863 3.4e-06 54.7 55 43.6
Atru.chr4.1032 Acer truncatum HOM05D000808 ORTHO05D000863 4.5e-06 54.3 72 43.1
Atru.chr4.1065 Acer truncatum HOM05D000808 ORTHO05D000863 4.5e-06 54.3 72 43.1
FAN21G1066 Fragaria x ananassa HOM05D000808 ORTHO05D000863 4.5e-06 54.3 70 50.0
ClCG11G017290 Citrullus lanatus HOM05D000808 ORTHO05D000863 7.7e-06 53.5 70 45.7
MELO3C025655.2 Cucumis melo HOM05D000808 ORTHO05D000863 7.7e-06 53.5 70 45.7
CsaV3_4G032940 Cucumis sativus L. HOM05D000808 ORTHO05D000863 7.7e-06 53.5 70 45.7
Os03g0809300 Oryza sativa ssp. japonica HOM05D000808 ORTHO05D000863 7.7e-06 53.5 70 40.0


User provided reference genes

Program Settings