Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p053334 Quercus lobata HOM05D004072 ORTHO05D005933 2.5e-47 191.8 99 100.0
Dinv32181 Davidia involucrata HOM05D004072 ORTHO05D005933 2.3e-45 185.3 99 94.9
Haze_05771 Corylus avellana HOM05D004072 ORTHO05D005933 3.0e-45 184.9 98 95.9
Hma1.2p1_1600F.1_g293150 Hydrangea macrophylla HOM05D004072 ORTHO05D005933 3.0e-45 184.9 98 95.9
MD10G1254200 Malus domestica HOM05D004072 ORTHO05D005933 3.0e-45 184.9 99 93.9
Lj1C1164T5 Lonicera japonica HOM05D004072 ORTHO05D005933 4.0e-45 184.5 99 93.9
Prupe.4G089200 Prunus persica HOM05D004072 ORTHO05D005933 5.2e-45 184.1 99 93.9
SGA_v2.0_scaffold223G42858 Striga asiatica HOM05D004072 ORTHO05D005933 6.8e-45 183.7 98 94.9
Nn3g20249 Nelumbo nucifera HOM05D004072 ORTHO05D005933 1.2e-44 183.0 98 92.9
GSVIVG01021613001 Vitis vinifera HOM05D004072 ORTHO05D005933 1.2e-44 183.0 99 93.9
Manes.14G122228 Manihot esculenta HOM05D004072 ORTHO05D005933 1.5e-44 182.6 98 93.9
Sabra16G0235400 Salix brachista HOM05D004072 ORTHO05D005933 1.5e-44 182.6 98 93.9
CSS0029738 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D005933 2.6e-44 181.8 99 90.9
Nitab4.5_0001181g0040 Nicotiana tabacum HOM05D004072 ORTHO05D005933 2.6e-44 181.8 99 89.9
Nitab4.5_0008398g0020 Nicotiana tabacum HOM05D004072 ORTHO05D005933 2.6e-44 181.8 99 89.9
TAR627G0650 Trochodendron aralioides HOM05D004072 ORTHO05D005933 3.4e-44 181.4 99 91.9
Migut.M01885 Erythranthe guttata HOM05D004072 ORTHO05D005933 4.4e-44 181.0 99 90.9
Potri.001G357700 Populus trichocarpa HOM05D004072 ORTHO05D005933 4.4e-44 181.0 98 93.9
SalBow8G4752 Salvia bowleyana HOM05D004072 ORTHO05D005933 4.4e-44 181.0 98 92.9
TWI73G0101 Tripterygium wilfordii HOM05D004072 ORTHO05D005933 5.7e-44 180.6 98 92.9
Actinidia07470 Actinidia chinensis HOM05D004072 ORTHO05D005933 9.8e-44 179.9 99 89.9
Cc09_g08230 Coffea canephora HOM05D004072 ORTHO05D005933 9.8e-44 179.9 98 90.8
MD05G1274500 Malus domestica HOM05D004072 ORTHO05D005933 9.8e-44 179.9 98 91.8
PGSC0003DMG400021174 Solanum tuberosum HOM05D004072 ORTHO05D005933 9.8e-44 179.9 99 88.9
PGR031G0553 Punica granatum HOM05D004072 ORTHO05D005933 1.7e-43 179.1 98 90.8
vmacro03398 Vaccinium macrocarpon HOM05D004072 ORTHO05D005933 1.7e-43 179.1 98 88.8
Manes.06G055700 Manihot esculenta HOM05D004072 ORTHO05D005933 2.2e-43 178.7 98 90.8
CiPaw.10G086200 Carya illinoinensis HOM05D004072 ORTHO05D005933 3.7e-43 177.9 99 91.9
Solyc02g070260.4 Solanum lycopersicum HOM05D004072 ORTHO05D005933 3.7e-43 177.9 98 88.8
Sopen02g019350 Solanum pennellii HOM05D004072 ORTHO05D005933 3.7e-43 177.9 98 88.8
Thecc.02G012200 Theobroma cacao HOM05D004072 ORTHO05D005933 3.7e-43 177.9 98 92.9
Eucgr.E02482 Eucalyptus grandis HOM05D004072 ORTHO05D005933 4.8e-43 177.6 98 90.8
Duzib132G0425 Durio zibethinus HOM05D004072 ORTHO05D005933 6.3e-43 177.2 98 90.8
RcHm_v2.0_Chr5g0015701 Rosa chinensis HOM05D004072 ORTHO05D005933 6.3e-43 177.2 98 90.8
MSTRG.16285 Avicennia marina HOM05D004072 ORTHO05D005933 8.3e-43 176.8 98 90.8
Oeu040089.1 Olea europaea HOM05D004072 ORTHO05D005933 8.3e-43 176.8 99 87.9
Ciclev10014084m.g Citrus clementina HOM05D004072 ORTHO05D005933 1.1e-42 176.4 98 89.8
Aqoxy1G01646_Aqoxy1G01645 Aquilegia oxysepala HOM05D004072 ORTHO05D005933 1.4e-42 176.0 99 88.9
FvH4_3g09950 Fragaria vesca HOM05D004072 ORTHO05D005933 1.4e-42 176.0 98 89.8
FAN11G0415 Fragaria x ananassa HOM05D004072 ORTHO05D005933 1.4e-42 176.0 98 89.8
FAN16G0609 Fragaria x ananassa HOM05D004072 ORTHO05D005933 1.4e-42 176.0 98 89.8
FAN25G0515 Fragaria x ananassa HOM05D004072 ORTHO05D005933 1.4e-42 176.0 98 89.8
COL.COLO4_17682 Corchorus olitorius HOM05D004072 ORTHO05D005933 1.8e-42 175.6 98 90.8
FAN21G2972 Fragaria x ananassa HOM05D004072 ORTHO05D005933 1.8e-42 175.6 98 88.8
Potri.011G090150 Populus trichocarpa HOM05D004072 ORTHO05D005933 1.8e-42 175.6 96 92.7
Atru.chr10.895 Acer truncatum HOM05D004072 ORTHO05D005933 4.1e-42 174.5 98 88.8
EL10Ac8g19581 Beta vulgaris HOM05D004072 ORTHO05D005933 4.1e-42 174.5 98 85.7
EL10Ac9g22637 Beta vulgaris HOM05D004072 ORTHO05D005933 7.0e-42 173.7 98 85.7
CiPaw.09G116100 Carya illinoinensis HOM05D004072 ORTHO05D005933 7.0e-42 173.7 99 87.9
MELO3C007083.2 Cucumis melo HOM05D004072 ORTHO05D005933 7.0e-42 173.7 98 87.8
CsaV3_6G052280 Cucumis sativus L. HOM05D004072 ORTHO05D005933 7.0e-42 173.7 98 87.8
Medtr2g048210 Medicago truncatula HOM05D004072 ORTHO05D005933 7.0e-42 173.7 99 85.9
RcHm_v2.0_Chr1g0313161 Rosa chinensis HOM05D004072 ORTHO05D005933 9.1e-42 173.3 98 87.8
Ah.14g086190 Amaranthus hybridus HOM05D004072 ORTHO05D005933 1.2e-41 172.9 97 86.6
PSO541G2055 Papaver somniferum HOM05D004072 ORTHO05D005933 1.2e-41 172.9 98 89.8
TPR.G28617 Trifolium pratense HOM05D004072 ORTHO05D005933 1.2e-41 172.9 99 85.9
PSO675G3632 Papaver somniferum HOM05D004072 ORTHO05D005933 1.6e-41 172.6 98 88.8
Phvul.009G217700 Phaseolus vulgaris HOM05D004072 ORTHO05D005933 1.6e-41 172.6 99 84.8
Hund21569 Selenicereus undatus HOM05D004072 ORTHO05D005933 1.6e-41 172.6 99 83.8
VMungo1309G2749 Vigna mungo HOM05D004072 ORTHO05D005933 1.6e-41 172.6 99 84.8
CANSAT35G1345 Cannabis sativa HOM05D004072 ORTHO05D005933 2.7e-41 171.8 99 84.8
Duzib052G1035 Durio zibethinus HOM05D004072 ORTHO05D005933 2.7e-41 171.8 98 88.8
Gohir.D01G131100 Gossypium hirsutum HOM05D004072 ORTHO05D005933 2.7e-41 171.8 98 87.8
Gorai.002G162800 Gossypium raimondii HOM05D004072 ORTHO05D005933 2.7e-41 171.8 98 87.8
Lj6g0006190 Lotus japonicus HOM05D004072 ORTHO05D005933 2.7e-41 171.8 99 85.9
arahy.Tifrunner.gnm1.ann1.39P5NE Arachis hypogaea HOM05D004072 ORTHO05D005933 3.5e-41 171.4 99 84.8
ClCG01G025080 Citrullus lanatus HOM05D004072 ORTHO05D005933 3.5e-41 171.4 98 86.7
Glyma.15G192700 Glycine max HOM05D004072 ORTHO05D005933 3.5e-41 171.4 98 86.7
Psat1g019120 Pisum sativum HOM05D004072 ORTHO05D005933 3.5e-41 171.4 99 86.9
Glyma.09G084300 Glycine max HOM05D004072 ORTHO05D005933 4.5e-41 171.0 98 86.7
Sed0022754 Sechium edule HOM05D004072 ORTHO05D005933 4.5e-41 171.0 98 85.7
HanXRQChr04g0119071 Helianthus annuus HOM05D004072 ORTHO05D005933 5.9e-41 170.6 98 86.7
RcHm_v2.0_Chr5g0015771 Rosa chinensis HOM05D004072 ORTHO05D005933 5.9e-41 170.6 98 87.8
SEGI_16447 Sequoiadendron giganteum HOM05D004072 ORTHO05D005933 5.9e-41 170.6 97 84.5
Ca_02513_v3 Cicer arietinum L. HOM05D004072 ORTHO05D005933 7.7e-41 170.2 99 83.8
Gohir.A01G139400 Gossypium hirsutum HOM05D004072 ORTHO05D005933 2.3e-40 168.7 98 85.7
HPP92_001000 Vanilla planifolia HOM05D004072 ORTHO05D005933 2.3e-40 168.7 97 84.5
Lsat_1_v5_gn_7_29400 Lactuca sativa HOM05D004072 ORTHO05D005933 3.8e-40 167.9 98 84.7
Os07g0148800 Oryza sativa ssp. japonica HOM05D004072 ORTHO05D005933 3.8e-40 167.9 98 81.6
AT2G34680 Arabidopsis thaliana HOM05D004072 ORTHO05D005933 5.0e-40 167.5 98 84.7
Lalb_Chr08g0233191 Lupinus albus HOM05D004072 ORTHO05D005933 5.0e-40 167.5 99 82.8
Sp4g16960 Schrenkiella parvula HOM05D004072 ORTHO05D005933 8.6e-40 166.8 98 84.7
THA.LOC104798608 Tarenaya hassleriana HOM05D004072 ORTHO05D005933 8.6e-40 166.8 97 84.5
TAR626G0996 Trochodendron aralioides HOM05D004072 ORTHO05D005933 8.6e-40 166.8 96 85.4
AUR62038603 Chenopodium quinoa HOM05D004072 ORTHO05D005933 1.5e-39 166.0 98 81.6
Thhalv10016130m.g Eutrema salsugineum HOM05D004072 ORTHO05D005933 2.5e-39 165.2 98 82.7
Aa31LG10G6650 Aethionema arabicum HOM05D004072 ORTHO05D005933 4.2e-39 164.5 98 82.7
AUR62042015 Chenopodium quinoa HOM05D004072 ORTHO05D005933 4.2e-39 164.5 98 79.6
AL4G30670 Arabidopsis lyrata HOM05D004072 ORTHO05D005933 1.6e-38 162.5 98 82.7
Zm00001eb299970 Zea mays HOM05D004072 ORTHO05D005933 1.6e-38 162.5 99 77.8
ECA236G2867 Erigeron canadensis HOM05D004072 ORTHO05D005933 3.6e-38 161.4 91 86.8
Carub.0004s1637 Capsella rubella HOM05D004072 ORTHO05D005933 8.0e-38 160.2 98 79.6
CARHR128800 Cardamine hirsuta HOM05D004072 ORTHO05D005933 1.0e-37 159.8 98 80.6
SMO271G0077 Selaginella moellendorffii HOM05D004072 ORTHO05D005933 1.0e-37 159.8 97 77.3
SMO308G0046 Selaginella moellendorffii HOM05D004072 ORTHO05D005933 1.0e-37 159.8 97 77.3
Mapoly0023s0068 Marchantia polymorpha HOM05D004072 ORTHO05D005933 1.8e-37 159.1 97 80.4
C03p22430 Brassica napus HOM05D004072 ORTHO05D005933 3.0e-37 158.3 97 79.4
Pp3c17_7410 Physcomitrium patens HOM05D004072 ORTHO05D005933 5.2e-37 157.5 97 78.4
A03p19230 Brassica napus HOM05D004072 ORTHO05D005933 6.8e-37 157.1 97 78.4
Pp3c14_11530 Physcomitrium patens HOM05D004072 ORTHO05D005933 1.2e-36 156.4 97 78.4
BolC3t14626H Brassica oleracea HOM05D004072 ORTHO05D005933 1.5e-36 156.0 97 78.4
BraA03t11178Z Brassica rapa HOM05D004072 ORTHO05D005933 1.5e-36 156.0 98 77.6
ATR0165G006 Amborella trichopoda HOM05D004072 ORTHO05D005933 9.8e-36 153.3 87 85.1
arahy.Tifrunner.gnm1.ann1.WCP5HM Arachis hypogaea HOM05D004072 ORTHO05D005933 4.9e-35 151.0 87 82.8
CAN.G660.42 Capsicum annuum HOM05D004072 ORTHO05D005933 1.6e-33 146.0 85 82.4
CBR_g34931 Chara braunii HOM05D000019 ORTHO05D001702 9.8e-28 126.7 85 69.4
Atru.chr2.7 Acer truncatum HOM05D004072 ORTHO05D005933 2.2e-27 125.6 78 78.2
Cc09_g08270 Coffea canephora HOM05D004072 ORTHO05D005933 1.4e-26 122.9 71 84.5
BcaC01g05784 Brassica carinata HOM05D004072 ORTHO05D005933 4.1e-26 121.3 75 78.7
Cc09_g08260 Coffea canephora HOM05D004072 ORTHO05D005933 2.8e-22 108.6 73 78.1
RcHm_v2.0_Chr1g0313151 Rosa chinensis HOM05D004072 ORTHO05D005933 3.7e-19 98.2 57 87.7
PGSC0003DMG400002279 Solanum tuberosum HOM05D004072 ORTHO05D005933 2.1e-14 82.4 48 87.5
PGSC0003DMG400006210 Solanum tuberosum HOM05D007022 ORTHO05D008868 1.4e-13 79.7 51 78.4
Peaxi162Scf00670g00114 Petunia axillaris HOM05D004072 ORTHO05D005933 2.3e-13 79.0 41 82.9
Sc24g0001460 Simmondsia chinensis HOM05D004072 ORTHO05D005933 3.1e-13 78.6 41 80.5
Medtr8g464200 Medicago truncatula HOM05D004072 ORTHO05D005933 2.2e-11 72.4 59 57.6
Rhsim12G0022600 Rhododendron simsii HOM05D004072 ORTHO05D005933 2.5e-07 58.9 49 65.3
Atru.chr10.903 Acer truncatum HOM05D004072 ORTHO05D021063 9.5e-07 57.0 42 76.2


User provided reference genes

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