Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p050737 Quercus lobata HOM05D005395 ORTHO05D006352 2.0e-261 905.2 445 100.0
QL05p060653 Quercus lobata HOM05D005395 ORTHO05D006352 6.1e-178 627.9 752 50.8
QL02p026227 Quercus lobata HOM05D005395 ORTHO05D006352 5.7e-168 594.7 752 49.1
QL12p011919 Quercus lobata HOM05D005395 ORTHO05D006352 4.6e-141 505.4 415 63.6
QL11p003492 Quercus lobata HOM05D005395 ORTHO05D006352 6.6e-140 501.5 415 63.1
Cfa008089 Carpinus fangiana HOM05D005395 ORTHO05D006352 3.4e-128 462.6 426 58.7
CiPaw.13G004500 Carya illinoinensis HOM05D005395 ORTHO05D006352 1.6e-109 400.6 338 62.1
TAR633G2667 Trochodendron aralioides HOM05D005395 ORTHO05D006352 5.6e-107 392.1 462 48.1
Manes.10G091300 Manihot esculenta HOM05D005395 ORTHO05D006352 1.6e-101 374.0 403 51.6
Atru.chr11.730 Acer truncatum HOM05D005395 ORTHO05D006352 6.2e-98 362.1 399 51.6
Prupe.2G012600 Prunus persica HOM05D005395 ORTHO05D006352 6.9e-97 358.6 410 49.3
Hma1.2p1_0293F.1_g116170 Hydrangea macrophylla HOM05D005395 ORTHO05D006352 1.6e-93 347.4 359 51.5
MD07G1010300 Malus domestica HOM05D005395 ORTHO05D006352 3.5e-93 346.3 381 49.1
Lj7C570T8 Lonicera japonica HOM05D005395 ORTHO05D006352 3.9e-92 342.8 390 50.5
vmacro13663 Vaccinium macrocarpon HOM05D005395 ORTHO05D006352 4.3e-91 339.3 382 46.9
Thecc.10G136000 Theobroma cacao HOM05D005395 ORTHO05D006352 5.7e-91 339.0 422 47.2
Rhsim07G0055200 Rhododendron simsii HOM05D005395 ORTHO05D006352 1.1e-89 334.7 362 48.3
CANSAT78G1614 Cannabis sativa HOM05D005395 ORTHO05D006352 9.0e-89 331.6 469 42.6
vmacro19894 Vaccinium macrocarpon HOM05D005395 ORTHO05D006352 9.0e-89 331.6 384 46.4
Ciclev10030541m.g Citrus clementina HOM05D005395 ORTHO05D006352 5.8e-88 328.9 378 48.7
Sed0006979 Sechium edule HOM05D005395 ORTHO05D006352 1.0e-87 328.2 392 46.9
Sabra03G0014300 Salix brachista HOM05D005395 ORTHO05D006352 3.8e-87 326.2 431 45.0
ClCG10G012430 Citrullus lanatus HOM05D005395 ORTHO05D006352 8.4e-87 325.1 444 43.7
Glyma.15G274000 Glycine max HOM05D005395 ORTHO05D006352 5.5e-86 322.4 413 46.0
CsaV3_3G032200 Cucumis sativus L. HOM05D005395 ORTHO05D006352 1.6e-85 320.9 396 47.0
Psat5g193800 Pisum sativum HOM05D005395 ORTHO05D006352 4.6e-85 319.3 413 42.9
TWI09G1525 Tripterygium wilfordii HOM05D005395 ORTHO05D006352 4.6e-85 319.3 407 45.2
GSVIVG01032086001 Vitis vinifera HOM05D005395 ORTHO05D006352 1.8e-84 317.4 365 49.0
Lj3g0013961 Lotus japonicus HOM05D005395 ORTHO05D006352 3.0e-84 316.6 427 43.1
Phvul.005G021500 Phaseolus vulgaris HOM05D005395 ORTHO05D006352 3.9e-84 316.2 418 43.1
Ca_14376_v3 Cicer arietinum L. HOM05D005395 ORTHO05D006352 5.1e-84 315.8 413 42.4
Glyma.08G155900 Glycine max HOM05D005395 ORTHO05D006352 6.7e-84 315.5 378 46.3
Potri.003G022600 Populus trichocarpa HOM05D005395 ORTHO05D006352 1.9e-83 313.9 431 44.8
RcHm_v2.0_Chr1g0315901 Rosa chinensis HOM05D005395 ORTHO05D006352 7.4e-83 312.0 397 45.1
Lalb_Chr13g0291141 Lupinus albus HOM05D005395 ORTHO05D006352 6.3e-82 308.9 406 43.6
VMungo1080G1687 Vigna mungo HOM05D005395 ORTHO05D006352 2.4e-81 307.0 396 43.7
FAN10G2468 Fragaria x ananassa HOM05D005395 ORTHO05D006352 5.9e-80 302.4 390 44.9
FAN03G2830 Fragaria x ananassa HOM05D005395 ORTHO05D006352 1.0e-79 301.6 390 44.9
FAN06G4072 Fragaria x ananassa HOM05D005395 ORTHO05D006352 1.3e-79 301.2 390 44.6
FvH4_7g01000 Fragaria vesca HOM05D005395 ORTHO05D006352 1.7e-79 300.8 390 44.6
Sc04g0005700 Simmondsia chinensis HOM05D005395 ORTHO05D006352 2.9e-79 300.1 395 42.8
arahy.Tifrunner.gnm1.ann1.LX21RY Arachis hypogaea HOM05D005395 ORTHO05D006352 8.5e-79 298.5 360 44.7
MELO3C023972.2 Cucumis melo HOM05D005395 ORTHO05D006352 1.1e-78 298.1 369 47.7
arahy.Tifrunner.gnm1.ann1.XBA78H Arachis hypogaea HOM05D005395 ORTHO05D006352 5.5e-78 295.8 360 45.0
Nn7g36191 Nelumbo nucifera HOM05D005395 ORTHO05D006352 7.2e-78 295.4 370 43.8
Nitab4.5_0013258g0010 Nicotiana tabacum HOM05D005395 ORTHO05D006352 5.1e-76 289.3 347 47.0
Nitab4.5_0000634g0140 Nicotiana tabacum HOM05D005395 ORTHO05D006352 2.8e-74 283.5 354 45.5
Oeu063172.1 Olea europaea HOM05D005395 ORTHO05D006352 1.5e-72 277.7 410 41.2
Solyc01g087095.2 Solanum lycopersicum HOM05D005395 ORTHO05D006352 2.6e-72 276.9 366 45.6
Sopen01g034170 Solanum pennellii HOM05D005395 ORTHO05D006352 2.6e-72 276.9 397 43.8
CAN.G1820.1 Capsicum annuum HOM05D005395 ORTHO05D006352 8.5e-71 271.9 395 43.0
SHI19147 Sapria himalayana HOM05D005395 ORTHO05D006352 8.5e-71 271.9 356 44.1
MBI03_g07304_MAGBIO Magnolia biondii HOM05D005395 ORTHO05D006352 3.2e-70 270.0 383 40.5
Gohir.D04G018600 Gossypium hirsutum HOM05D005395 ORTHO05D006352 4.2e-70 269.6 369 42.5
Gorai.012G022200 Gossypium raimondii HOM05D005395 ORTHO05D006352 5.5e-70 269.2 369 42.5
Gohir.A05G396700 Gossypium hirsutum HOM05D005395 ORTHO05D006352 9.4e-70 268.5 398 41.2
Aqoxy1G02896 Aquilegia oxysepala HOM05D005395 ORTHO05D006352 4.7e-69 266.2 372 41.7
COL.COLO4_04642 Corchorus olitorius HOM05D005395 ORTHO05D006352 1.0e-68 265.0 364 44.8
SGA_v2.0_scaffold119G32730 Striga asiatica HOM05D005395 ORTHO05D006352 2.0e-67 260.8 423 40.0
EL10Ac1g02254 Beta vulgaris HOM05D005395 ORTHO05D006352 4.1e-65 253.1 377 39.5
Migut.B01303 Erythranthe guttata HOM05D005395 ORTHO05D006352 2.0e-64 250.8 439 38.3
DCAR_005449 Daucus carota HOM05D005395 ORTHO05D006352 3.5e-64 250.0 370 40.5
Peaxi162Scf00428g00318 Petunia axillaris HOM05D005395 ORTHO05D006352 5.9e-64 249.2 256 50.8
PSO339G2846 Papaver somniferum HOM05D005395 ORTHO05D006352 3.8e-63 246.5 373 38.9
Migut.B01025 Erythranthe guttata HOM05D005395 ORTHO05D006352 2.1e-61 240.7 353 42.5
AUR62041247 Chenopodium quinoa HOM05D005395 ORTHO05D006352 1.4e-60 238.0 369 38.5
PGR042G3169 Punica granatum HOM05D005395 ORTHO05D006352 1.4e-60 238.0 352 41.2
Hund24995 Selenicereus undatus HOM05D005395 ORTHO05D006352 2.6e-59 233.8 375 37.1
Cpa.g.sc245.15 Carica papaya HOM05D005395 ORTHO05D006352 4.4e-59 233.0 250 50.4
unitig_0.g1385 Utricularia gibba HOM05D005395 ORTHO05D006352 6.3e-58 229.2 386 37.6
Lsat_1_v5_gn_4_31580 Lactuca sativa HOM05D005395 ORTHO05D006352 1.8e-57 227.6 339 38.9
HanXRQChr12g0379891 Helianthus annuus HOM05D005395 ORTHO05D006352 9.1e-57 225.3 443 34.8
ATR0681G222 Amborella trichopoda HOM05D005395 ORTHO05D006352 2.0e-51 207.6 391 34.3
Actinidia24666 Actinidia chinensis HOM05D005395 ORTHO05D006352 9.1e-49 198.7 240 45.8
Carub.0006s1507 Capsella rubella HOM05D005395 ORTHO05D006352 2.0e-48 197.6 393 33.6
PSO384G3069 Papaver somniferum HOM05D005395 ORTHO05D006352 1.5e-46 191.4 239 43.5
BcaC04g18841 Brassica carinata HOM05D005395 ORTHO05D006352 7.2e-46 189.1 376 34.0
BraA10t44297Z Brassica rapa HOM05D005395 ORTHO05D006352 1.6e-45 188.0 392 32.9
C09p60230 Brassica napus HOM05D005395 ORTHO05D006352 1.4e-44 184.9 394 32.5
BolC9t58856H Brassica oleracea HOM05D005395 ORTHO05D006352 1.4e-44 184.9 394 32.5
AT5G16850 Arabidopsis thaliana HOM05D005395 ORTHO05D006352 1.8e-44 184.5 387 33.9
A10p22380 Brassica napus HOM05D005395 ORTHO05D006352 4.0e-44 183.3 396 32.3
Sp6g27270 Schrenkiella parvula HOM05D005395 ORTHO05D006352 2.0e-43 181.0 382 33.5
CARHR196310 Cardamine hirsuta HOM05D005395 ORTHO05D006352 1.3e-42 178.3 375 35.2
QL02p026296 Quercus lobata HOM05D005395 ORTHO05D006352 1.3e-42 178.3 220 48.2
AUR62014136 Chenopodium quinoa HOM05D005395 ORTHO05D006352 1.4e-41 174.9 334 34.4
SEGI_03843 Sequoiadendron giganteum HOM05D005395 ORTHO05D006352 5.4e-41 172.9 434 30.0
Thhalv10012498m.g Eutrema salsugineum HOM05D005395 ORTHO05D006352 9.1e-41 172.2 393 31.8
Aa31sc160G20 Aethionema arabicum HOM05D005395 ORTHO05D006352 6.8e-36 156.0 354 30.5
AagrBONN_evm.TU.Sc2ySwM_344.2351 Anthoceros agrestis HOM05D005395 ORTHO05D006352 1.2e-35 155.2 343 32.7
ECA234G1269 Erigeron canadensis HOM05D005395 ORTHO05D000002 1.2e-35 155.2 250 38.8
SEGI_09183 Sequoiadendron giganteum HOM05D005395 ORTHO05D006352 1.9e-30 137.9 279 32.6
Pp3c1_42700 Physcomitrium patens HOM05D005395 ORTHO05D006352 1.8e-28 131.3 305 30.8
Mapoly0009s0015 Marchantia polymorpha HOM05D005395 ORTHO05D006352 6.8e-28 129.4 224 35.3
Cre04.g213652 Chlamydomonas reinhardtii HOM05D005395 ORTHO05D006352 9.8e-19 99.0 187 32.6
CBR_g45714 Chara braunii HOM05D005395 ORTHO05D006352 1.4e-17 95.1 315 27.0
Cfa026815 Carpinus fangiana HOM05D005395 ORTHO05D006352 4.6e-16 90.1 306 25.2
CDE07G1503 Ceratophyllum demersum HOM05D005395 ORTHO05D006352 1.1e-14 85.5 122 39.3
MCO03G604 Micromonas commoda HOM05D005395 ORTHO05D006352 1.6e-13 81.6 346 24.3
HPP92_011342 Vanilla planifolia HOM05D005395 ORTHO05D006352 6.2e-13 79.7 351 24.8
Hma1.2p1_0293F.1_g116180 Hydrangea macrophylla HOM05D005395 ORTHO05D006352 2.5e-06 57.8 76 46.1


User provided reference genes

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