Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p050003 Quercus lobata HOM05D004542 ORTHO05D005380 5.4e-72 274.2 141 100.0
Cfa004898 Carpinus fangiana HOM05D004542 ORTHO05D005380 2.5e-45 185.7 141 67.4
CiPaw.06G087700 Carya illinoinensis HOM05D004542 ORTHO05D005380 3.2e-40 168.7 123 66.7
CSS0014017 Camellia sinensis var. sinensis HOM05D004542 ORTHO05D005380 1.8e-38 162.9 120 69.2
CSS0031140 Camellia sinensis var. sinensis HOM05D004542 ORTHO05D005380 1.8e-38 162.9 120 69.2
Duzib248G0510 Durio zibethinus HOM05D004542 ORTHO05D005380 3.0e-38 162.2 122 66.4
Thecc.02G341300 Theobroma cacao HOM05D004542 ORTHO05D005380 3.0e-38 162.2 139 62.6
TWI09G1372 Tripterygium wilfordii HOM05D004542 ORTHO05D005380 7.4e-37 157.5 126 63.5
Potri.010G165100 Populus trichocarpa HOM05D004542 ORTHO05D005380 2.1e-36 156.0 117 61.5
CANSAT21G2357 Cannabis sativa HOM05D004542 ORTHO05D005380 3.7e-36 155.2 139 61.9
MD04G1010200 Malus domestica HOM05D004542 ORTHO05D005380 3.7e-36 155.2 140 59.3
TWI73G0467 Tripterygium wilfordii HOM05D004542 ORTHO05D005380 6.3e-36 154.5 136 57.4
Duzib251G0803 Durio zibethinus HOM05D004542 ORTHO05D005380 1.1e-35 153.7 141 58.9
Carub.0001s2428 Capsella rubella HOM05D004542 ORTHO05D005380 2.4e-35 152.5 120 60.8
Manes.01G033600 Manihot esculenta HOM05D004542 ORTHO05D005380 2.4e-35 152.5 138 58.7
Dinv07945 Davidia involucrata HOM05D004542 ORTHO05D005380 3.1e-35 152.1 139 64.0
Prupe.1G009500 Prunus persica HOM05D004542 ORTHO05D005380 3.1e-35 152.1 140 57.9
AL1G38970 Arabidopsis lyrata HOM05D004542 ORTHO05D005380 4.1e-35 151.8 114 61.4
Potri.008G090100 Populus trichocarpa HOM05D004542 ORTHO05D005380 4.1e-35 151.8 135 58.5
Atru.chr11.1738 Acer truncatum HOM05D004542 ORTHO05D005380 6.9e-35 151.0 135 59.3
Actinidia31969 Actinidia chinensis HOM05D004542 ORTHO05D005380 9.0e-35 150.6 141 56.7
BcaB03g14086 Brassica carinata HOM05D004542 ORTHO05D005380 9.0e-35 150.6 116 60.3
FvH4_4g13880 Fragaria vesca HOM05D004542 ORTHO05D005380 9.0e-35 150.6 115 61.7
FAN12G3669 Fragaria x ananassa HOM05D004542 ORTHO05D005380 9.0e-35 150.6 115 61.7
Cpa.g.sc69.70 Carica papaya HOM05D004542 ORTHO05D005380 1.2e-34 150.2 117 62.4
AT1G26740 Arabidopsis thaliana HOM05D004542 ORTHO05D005380 2.0e-34 149.4 111 63.1
C05p24230 Brassica napus HOM05D004542 ORTHO05D005380 2.6e-34 149.1 116 62.1
BolC5t31159H Brassica oleracea HOM05D004542 ORTHO05D005380 2.6e-34 149.1 116 62.1
FAN07G0300 Fragaria x ananassa HOM05D004542 ORTHO05D005380 2.6e-34 149.1 115 60.0
Ciclev10033055m.g Citrus clementina HOM05D004542 ORTHO05D005380 5.9e-34 147.9 128 60.2
A07p13070 Brassica napus HOM05D004542 ORTHO05D005380 7.6e-34 147.5 120 59.2
C07p19550 Brassica napus HOM05D004542 ORTHO05D005380 7.6e-34 147.5 118 61.0
BolC7t42472H Brassica oleracea HOM05D004542 ORTHO05D005380 7.6e-34 147.5 118 61.0
Aa31LG7G8390 Aethionema arabicum HOM05D004542 ORTHO05D005380 1.0e-33 147.1 116 62.9
BcaC06g35127 Brassica carinata HOM05D004542 ORTHO05D005380 1.0e-33 147.1 118 60.2
TAR622G0172 Trochodendron aralioides HOM05D004542 ORTHO05D005380 1.3e-33 146.7 137 60.6
CARHR025220 Cardamine hirsuta HOM05D004542 ORTHO05D005380 1.7e-33 146.4 111 62.2
FAN22G1961 Fragaria x ananassa HOM05D004542 ORTHO05D005380 1.7e-33 146.4 115 60.0
BcaC05g26392 Brassica carinata HOM05D004542 ORTHO05D005380 2.2e-33 146.0 116 61.2
BraA07t29078Z Brassica rapa HOM05D004542 ORTHO05D005380 2.9e-33 145.6 120 58.3
Actinidia17747 Actinidia chinensis HOM05D004542 ORTHO05D005380 6.5e-33 144.4 119 62.2
Thhalv10009076m.g Eutrema salsugineum HOM05D004542 ORTHO05D005380 6.5e-33 144.4 119 58.8
Cpa.g.sc57.38 Carica papaya HOM05D004542 ORTHO05D005380 1.9e-32 142.9 120 59.2
RcHm_v2.0_Chr4g0415001 Rosa chinensis HOM05D004542 ORTHO05D005380 1.9e-32 142.9 115 59.1
Sp5g24560 Schrenkiella parvula HOM05D004542 ORTHO05D005380 1.9e-32 142.9 116 62.1
THA.LOC104822040 Tarenaya hassleriana HOM05D004542 ORTHO05D005380 2.5e-32 142.5 119 63.0
BraA09t39513Z Brassica rapa HOM05D004542 ORTHO05D005380 3.2e-32 142.1 116 60.3
Cc00_g16630 Coffea canephora HOM05D004542 ORTHO05D005380 5.5e-32 141.4 137 59.1
A09p40150 Brassica napus HOM05D004542 ORTHO05D005380 9.3e-32 140.6 116 59.5
THA.LOC104808670 Tarenaya hassleriana HOM05D004542 ORTHO05D005380 9.3e-32 140.6 108 63.9
Peaxi162Scf00023g02531 Petunia axillaris HOM05D004542 ORTHO05D005380 2.7e-31 139.0 121 57.9
Sabra08G0067500 Salix brachista HOM05D004542 ORTHO05D005380 4.6e-31 138.3 128 55.5
Solyc04g005590.3 Solanum lycopersicum HOM05D004542 ORTHO05D005380 4.6e-31 138.3 140 53.6
Psat0s1693g0080 Pisum sativum HOM05D004542 ORTHO05D005380 6.1e-31 137.9 140 55.0
PGR083G2602 Punica granatum HOM05D004542 ORTHO05D005380 6.1e-31 137.9 116 62.1
AL2G28600 Arabidopsis lyrata HOM05D004542 ORTHO05D005380 1.0e-30 137.1 123 59.3
Lsat_1_v5_gn_8_48901 Lactuca sativa HOM05D004542 ORTHO05D005380 1.0e-30 137.1 121 59.5
Sopen04g001630 Solanum pennellii HOM05D004542 ORTHO05D005380 1.0e-30 137.1 139 54.0
RcHm_v2.0_Chr6g0251041 Rosa chinensis HOM05D004542 ORTHO05D005380 1.8e-30 136.3 109 62.4
Gohir.A07G047800 Gossypium hirsutum HOM05D004542 ORTHO05D005380 2.3e-30 136.0 144 59.0
PGSC0003DMG400002854 Solanum tuberosum HOM05D004542 ORTHO05D005380 2.3e-30 136.0 140 53.6
Peaxi162Scf00222g00329 Petunia axillaris HOM05D004542 ORTHO05D005380 3.0e-30 135.6 119 58.0
RcHm_v2.0_Chr4g0414951 Rosa chinensis HOM05D004542 ORTHO05D005380 5.1e-30 134.8 123 54.5
Gohir.D07G052100 Gossypium hirsutum HOM05D004542 ORTHO05D005380 8.7e-30 134.0 144 57.6
Haze_11968 Corylus avellana HOM05D004542 ORTHO05D005380 1.1e-29 133.7 112 65.2
Migut.L01259 Erythranthe guttata HOM05D004542 ORTHO05D005380 1.5e-29 133.3 119 58.8
Hma1.2p1_0357F.1_g134240 Hydrangea macrophylla HOM05D004542 ORTHO05D005380 1.5e-29 133.3 96 69.8
Sc03g0001820 Simmondsia chinensis HOM05D004542 ORTHO05D005380 1.5e-29 133.3 119 58.0
MSTRG.2336 Avicennia marina HOM05D004542 ORTHO05D005380 2.5e-29 132.5 118 57.6
Gorai.001G055100 Gossypium raimondii HOM05D004542 ORTHO05D005380 2.5e-29 132.5 146 57.5
Solyc05g013190.4 Solanum lycopersicum HOM05D004542 ORTHO05D005380 3.3e-29 132.1 121 62.8
Sopen05g007930 Solanum pennellii HOM05D004542 ORTHO05D005380 3.3e-29 132.1 121 62.8
Nitab4.5_0013306g0010 Nicotiana tabacum HOM05D004542 ORTHO05D005380 4.3e-29 131.7 121 57.9
HanXRQChr15g0476941 Helianthus annuus HOM05D004542 ORTHO05D005380 7.4e-29 131.0 109 59.6
ClCG05G024060 Citrullus lanatus HOM05D004542 ORTHO05D005380 9.7e-29 130.6 142 51.4
TPR.G5742 Trifolium pratense HOM05D004542 ORTHO05D005380 1.3e-28 130.2 116 59.5
EL10Ac2g02750 Beta vulgaris HOM05D004542 ORTHO05D005380 2.8e-28 129.0 119 57.1
Eucgr.D00185 Eucalyptus grandis HOM05D004542 ORTHO05D005380 2.8e-28 129.0 111 57.7
Sc14g0007580 Simmondsia chinensis HOM05D004542 ORTHO05D005380 3.7e-28 128.6 107 61.7
MBI02_g20485_MAGBIO Magnolia biondii HOM05D004542 ORTHO05D005380 4.8e-28 128.3 139 53.2
Medtr1g025320 Medicago truncatula HOM05D004542 ORTHO05D005380 4.8e-28 128.3 130 53.8
Nitab4.5_0000391g0330 Nicotiana tabacum HOM05D004542 ORTHO05D005380 4.8e-28 128.3 142 52.8
HanXRQChr12g0361941 Helianthus annuus HOM05D004542 ORTHO05D005380 6.3e-28 127.9 118 56.8
Nn3g18387 Nelumbo nucifera HOM05D004542 ORTHO05D005380 6.3e-28 127.9 143 50.3
Oeu001710.1 Olea europaea HOM05D004542 ORTHO05D005380 1.8e-27 126.3 138 47.8
AUR62031723 Chenopodium quinoa HOM05D004542 ORTHO05D005380 2.4e-27 125.9 139 51.1
Phvul.002G208200 Phaseolus vulgaris HOM05D004542 ORTHO05D005380 4.1e-27 125.2 142 52.8
Glyma.08G073000 Glycine max HOM05D004542 ORTHO05D005380 5.3e-27 124.8 110 60.0
VMungo0251G2924 Vigna mungo HOM05D004542 ORTHO05D005380 5.3e-27 124.8 144 50.7
Lalb_Chr10g0097781 Lupinus albus HOM05D004542 ORTHO05D005380 6.9e-27 124.4 137 52.6
ECA233G6069 Erigeron canadensis HOM05D004542 ORTHO05D005380 9.1e-27 124.0 118 55.1
Sed0021036 Sechium edule HOM05D004542 ORTHO05D005380 1.2e-26 123.6 132 51.5
Glyma.05G118100 Glycine max HOM05D004542 ORTHO05D005380 1.5e-26 123.2 119 56.3
SalBow1G8597 Salvia bowleyana HOM05D004542 ORTHO05D005380 1.5e-26 123.2 118 54.2
Glyma.06G320500 Glycine max HOM05D004542 ORTHO05D005380 2.0e-26 122.9 145 51.7
Nn3g17306 Nelumbo nucifera HOM05D004542 ORTHO05D005380 2.0e-26 122.9 143 50.3
MELO3C012119.2 Cucumis melo HOM05D004542 ORTHO05D005380 4.5e-26 121.7 101 63.4
CsaV3_5G032980 Cucumis sativus L. HOM05D004542 ORTHO05D005380 7.7e-26 120.9 141 47.5
Ah.08g212630 Amaranthus hybridus HOM05D004542 ORTHO05D005380 1.0e-25 120.6 117 54.7
CDE04G0708 Ceratophyllum demersum HOM05D004542 ORTHO05D005380 1.0e-25 120.6 129 55.8
DCAR_027429 Daucus carota HOM05D004542 ORTHO05D005380 1.0e-25 120.6 187 39.6
ECA246G0207 Erigeron canadensis HOM05D004542 ORTHO05D005380 1.3e-25 120.2 127 54.3
Aqoxy3G03464 Aquilegia oxysepala HOM05D004542 ORTHO05D005380 2.9e-25 119.0 137 54.0
Ca_18347_v3 Cicer arietinum L. HOM05D004542 ORTHO05D005380 2.9e-25 119.0 137 51.8
PSO063G3361 Papaver somniferum HOM05D004542 ORTHO05D005380 6.5e-25 117.9 69 75.4
Lj4g0012875 Lotus japonicus HOM05D004542 ORTHO05D005380 1.1e-24 117.1 124 54.0
SalBow1G7833 Salvia bowleyana HOM05D004542 ORTHO05D005380 2.5e-24 115.9 118 51.7
TPR.G8852 Trifolium pratense HOM05D004542 ORTHO05D005380 3.2e-24 115.5 90 64.4
CDE07G0585 Ceratophyllum demersum HOM05D004542 ORTHO05D005380 5.5e-24 114.8 133 51.1
CANSAT21G0056 Cannabis sativa HOM05D004542 ORTHO05D005380 9.4e-24 114.0 109 60.6
arahy.Tifrunner.gnm1.ann1.53F0XR Arachis hypogaea HOM05D004542 ORTHO05D005380 1.0e-22 110.5 127 50.4
arahy.Tifrunner.gnm1.ann1.H527P9 Arachis hypogaea HOM05D004542 ORTHO05D005380 1.0e-22 110.5 127 50.4
Lj4g0007672 Lotus japonicus HOM05D004542 ORTHO05D005380 1.4e-22 110.2 124 50.8
SalBow1G4390 Salvia bowleyana HOM05D004542 ORTHO05D005380 2.3e-22 109.4 124 48.4
SGA_v2.0_scaffold455G51899 Striga asiatica HOM05D004542 ORTHO05D005380 2.3e-22 109.4 113 52.2
Nitab4.5_0001077g0020 Nicotiana tabacum HOM05D004542 ORTHO05D005380 3.9e-22 108.6 156 44.9
AUR62032610 Chenopodium quinoa HOM05D004542 ORTHO05D005380 1.1e-21 107.1 173 40.5
Sp1g22070 Schrenkiella parvula HOM05D004542 ORTHO05D005380 2.6e-21 105.9 92 57.6
AT1G69485 Arabidopsis thaliana HOM05D004542 ORTHO05D005380 3.3e-21 105.5 62 74.2
COL.COLO4_32021 Corchorus olitorius HOM05D004542 ORTHO05D005380 4.4e-21 105.1 95 63.2
Os10g0407100 Oryza sativa ssp. japonica HOM05D004542 ORTHO05D005380 3.7e-20 102.1 60 71.7
SalBow1G1756 Salvia bowleyana HOM05D004542 ORTHO05D005380 3.7e-20 102.1 60 71.7
MD13G1284400 Malus domestica HOM05D002269 ORTHO05D005380 6.3e-20 101.3 175 38.9
Os03g0168900 Oryza sativa ssp. japonica HOM05D004542 ORTHO05D005380 1.1e-19 100.5 120 48.3
Rhsim05G0092000 Rhododendron simsii HOM05D004542 ORTHO05D005380 1.1e-19 100.5 92 59.8
RhsimUnG0183400 Rhododendron simsii HOM05D004542 ORTHO05D005380 1.1e-19 100.5 92 59.8
Ciclev10013639m.g Citrus clementina HOM05D004542 ORTHO05D005380 1.5e-18 96.7 138 44.2
Zm00001eb402400 Zea mays HOM05D004542 ORTHO05D005380 2.6e-18 95.9 117 47.0
Manes.05G105400 Manihot esculenta HOM05D004542 ORTHO05D005380 7.7e-18 94.4 115 49.6
Oeu054854.1 Olea europaea HOM05D004542 ORTHO05D005380 7.7e-18 94.4 113 50.4
Sopen03g017060 Solanum pennellii HOM05D004542 ORTHO05D005380 1.0e-17 94.0 63 63.5
Hund04421 Selenicereus undatus HOM05D004542 ORTHO05D005380 2.9e-17 92.4 113 52.2
Carub.0002s1610 Capsella rubella HOM05D004542 ORTHO05D005380 1.2e-15 87.0 51 72.5
Mapoly0152s0024 Marchantia polymorpha HOM05D004542 ORTHO05D005380 7.9e-15 84.3 51 68.6
Pp3c1_32410 Physcomitrium patens HOM05D004542 ORTHO05D005380 7.9e-15 84.3 56 62.5
CBR_g23146 Chara braunii HOM05D004542 ORTHO05D005380 1.1e-13 80.5 50 64.0
AagrBONN_evm.TU.Sc2ySwM_228.5417 Anthoceros agrestis HOM05D004542 ORTHO05D005380 7.4e-13 77.8 55 61.8
Glyma.04G115800 Glycine max HOM05D004542 ORTHO05D005380 9.7e-13 77.4 47 83.0
MBI02_g44667_MAGBIO Magnolia biondii HOM05D004542 ORTHO05D005380 1.7e-12 76.6 107 45.8
PSO782G1969 Papaver somniferum HOM05D004542 ORTHO05D005380 4.8e-12 75.1 44 75.0
COL.COLO4_27991 Corchorus olitorius HOM05D004542 ORTHO05D005380 6.3e-12 74.7 101 50.5
Sabra10G0125700 Salix brachista HOM05D004542 ORTHO05D005380 6.3e-12 74.7 74 48.6
Nitab4.5_0000014g0150 Nicotiana tabacum HOM05D004542 ORTHO05D005380 2.4e-11 72.8 146 41.1
SMO358G0607 Selaginella moellendorffii HOM05D000228 ORTHO05D005112 2.4e-11 72.8 49 61.2
Zm00001eb005320 Zea mays HOM05D004542 ORTHO05D005380 1.3e-09 67.0 40 72.5
COL.COLO4_27990 Corchorus olitorius HOM05D004542 ORTHO05D005380 2.5e-08 62.8 70 57.1
MCO02G272 Micromonas commoda HOM05D004542 ORTHO05D005380 3.2e-08 62.4 50 54.0
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 1.8e-06 56.6 37 64.9
vmacro01352 Vaccinium macrocarpon HOM05D004542 ORTHO05D005380 8.8e-06 54.3 25 92.0


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