Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p048106 Quercus lobata HOM05D005499 ORTHO05D006666 1.2e-68 263.1 135 100.0
QL02p072772 Quercus lobata HOM05D005499 ORTHO05D006666 1.3e-43 179.9 102 90.2
Dinv33378 Davidia involucrata HOM05D005499 ORTHO05D006666 2.3e-43 179.1 107 84.1
CiPaw.03G051000 Carya illinoinensis HOM05D005499 ORTHO05D006666 8.6e-43 177.2 102 88.2
TWI56G1275 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 8.6e-43 177.2 107 83.2
Haze_14820 Corylus avellana HOM05D005499 ORTHO05D006666 1.5e-42 176.4 102 87.3
Gohir.A10G160300 Gossypium hirsutum HOM05D005499 ORTHO05D006666 3.3e-42 175.3 108 81.5
COL.COLO4_29287 Corchorus olitorius HOM05D005499 ORTHO05D006666 4.3e-42 174.9 107 83.2
Hma1.2p1_0279F.1_g112320 Hydrangea macrophylla HOM05D005499 ORTHO05D006666 7.3e-42 174.1 103 83.5
Duzib187G1007 Durio zibethinus HOM05D005499 ORTHO05D006666 9.5e-42 173.7 107 83.2
Thecc.04G028500 Theobroma cacao HOM05D005499 ORTHO05D006666 1.2e-41 173.3 107 83.2
Cfa007270 Carpinus fangiana HOM05D005499 ORTHO05D006666 2.1e-41 172.6 102 85.3
Duzib264G0656 Durio zibethinus HOM05D005499 ORTHO05D006666 2.8e-41 172.2 107 83.2
Gohir.D10G084868 Gossypium hirsutum HOM05D005499 ORTHO05D006666 2.8e-41 172.2 117 77.8
TWI36G0940 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 3.6e-41 171.8 107 81.3
Gorai.011G092800 Gossypium raimondii HOM05D005499 ORTHO05D006666 6.2e-41 171.0 117 76.9
Atru.chr6.2492 Acer truncatum HOM05D005499 ORTHO05D006666 1.1e-40 170.2 107 79.4
Cpa.g.sc130.24 Carica papaya HOM05D005499 ORTHO05D006666 1.4e-40 169.9 130 70.8
Nn4g24319 Nelumbo nucifera HOM05D005499 ORTHO05D006666 1.4e-40 169.9 122 73.0
Oeu003270.1 Olea europaea HOM05D005499 ORTHO05D006666 1.4e-40 169.9 105 81.0
CSS0020557 Camellia sinensis var. sinensis HOM05D005499 ORTHO05D006666 2.3e-40 169.1 108 78.7
SalBow7G4317 Salvia bowleyana HOM05D005499 ORTHO05D006666 4.0e-40 168.3 107 77.6
Aqoxy3G01444 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 6.8e-40 167.5 105 80.0
Phvul.003G262000 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 6.8e-40 167.5 102 79.4
DCAR_011296 Daucus carota HOM05D005499 ORTHO05D006666 8.9e-40 167.2 102 78.4
ECA238G0236 Erigeron canadensis HOM05D005499 ORTHO05D006666 1.2e-39 166.8 101 84.2
Gorai.012G089400 Gossypium raimondii HOM05D005499 ORTHO05D006666 1.5e-39 166.4 107 81.3
Rhsim10G0010400 Rhododendron simsii HOM05D005499 ORTHO05D006666 2.0e-39 166.0 102 82.4
Eucgr.J02294 Eucalyptus grandis HOM05D005499 ORTHO05D006666 2.6e-39 165.6 107 79.4
HanXRQChr01g0030421 Helianthus annuus HOM05D005499 ORTHO05D006666 2.6e-39 165.6 103 81.6
Lalb_Chr02g0157891 Lupinus albus HOM05D005499 ORTHO05D006666 3.4e-39 165.2 102 82.4
Cc10_g08070 Coffea canephora HOM05D005499 ORTHO05D006666 4.4e-39 164.9 107 80.4
RcHm_v2.0_Chr3g0449841 Rosa chinensis HOM05D005499 ORTHO05D006666 4.4e-39 164.9 101 84.2
FAN05G0237 Fragaria x ananassa HOM05D005499 ORTHO05D006666 5.8e-39 164.5 101 83.2
FAN05G2282 Fragaria x ananassa HOM05D005499 ORTHO05D006666 5.8e-39 164.5 101 83.2
CANSAT11G2604 Cannabis sativa HOM05D005499 ORTHO05D006666 7.6e-39 164.1 102 80.4
FvH4_6g02050 Fragaria vesca HOM05D005499 ORTHO05D006666 7.6e-39 164.1 101 83.2
FAN05G1403 Fragaria x ananassa HOM05D005499 ORTHO05D006666 7.6e-39 164.1 101 83.2
FAN09G0379 Fragaria x ananassa HOM05D005499 ORTHO05D006666 7.6e-39 164.1 101 83.2
FAN14G4216 Fragaria x ananassa HOM05D005499 ORTHO05D006666 7.6e-39 164.1 101 83.2
ClCG04G001400 Citrullus lanatus HOM05D005499 ORTHO05D006666 9.9e-39 163.7 103 79.6
FvH4_4g13440 Fragaria vesca HOM05D005499 ORTHO05D006666 9.9e-39 163.7 101 83.2
FAN12G0501 Fragaria x ananassa HOM05D005499 ORTHO05D006666 9.9e-39 163.7 101 83.2
Lalb_Chr21g0317581 Lupinus albus HOM05D005499 ORTHO05D006666 9.9e-39 163.7 102 80.4
Prupe.6G125800 Prunus persica HOM05D005499 ORTHO05D006666 9.9e-39 163.7 107 77.6
Aqoxy5G03538 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 1.3e-38 163.3 107 76.6
TAR371G0544 Trochodendron aralioides HOM05D005499 ORTHO05D006666 1.3e-38 163.3 122 69.7
FAN05G4095 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.7e-38 162.9 101 82.2
FAN14G1883 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.7e-38 162.9 101 83.2
Lj6g0007933 Lotus japonicus HOM05D005499 ORTHO05D006666 1.7e-38 162.9 102 80.4
Ca_25364_v3 Cicer arietinum L. HOM05D005499 ORTHO05D006666 2.2e-38 162.5 102 79.4
Migut.K01440 Erythranthe guttata HOM05D005499 ORTHO05D006666 2.2e-38 162.5 102 78.4
VMungo0464G1619 Vigna mungo HOM05D005499 ORTHO05D006666 2.2e-38 162.5 102 78.4
MSTRG.3267 Avicennia marina HOM05D005499 ORTHO05D006666 2.9e-38 162.2 105 76.2
MBI11_g21381_MAGBIO Magnolia biondii HOM05D005499 ORTHO05D006666 2.9e-38 162.2 107 75.7
SGA_v2.0_scaffold47G17558 Striga asiatica HOM05D005499 ORTHO05D006666 2.9e-38 162.2 103 78.6
Ciclev10017154m.g Citrus clementina HOM05D005499 ORTHO05D006666 3.8e-38 161.8 107 75.7
Nitab4.5_0012484g0010 Nicotiana tabacum HOM05D005499 ORTHO05D006666 3.8e-38 161.8 103 76.7
Solyc11g010180.2 Solanum lycopersicum HOM05D005499 ORTHO05D006666 3.8e-38 161.8 102 76.5
Sopen11g004960 Solanum pennellii HOM05D005499 ORTHO05D006666 3.8e-38 161.8 102 76.5
Lsat_1_v5_gn_3_10761 Lactuca sativa HOM05D005499 ORTHO05D006666 4.9e-38 161.4 103 79.6
Psat1g031800 Pisum sativum HOM05D005499 ORTHO05D006666 4.9e-38 161.4 102 77.5
MELO3C008981.2 Cucumis melo HOM05D005499 ORTHO05D006666 6.4e-38 161.0 102 78.4
FAN14G2627 Fragaria x ananassa HOM05D005499 ORTHO05D006666 8.4e-38 160.6 101 82.2
Glyma.19G077100 Glycine max HOM05D005499 ORTHO05D006666 8.4e-38 160.6 102 78.4
Manes.15G156800 Manihot esculenta HOM05D005499 ORTHO05D006666 8.4e-38 160.6 107 77.6
Nitab4.5_0000743g0030 Nicotiana tabacum HOM05D005499 ORTHO05D006666 8.4e-38 160.6 103 75.7
Gohir.D04G079400 Gossypium hirsutum HOM05D005499 ORTHO05D006666 1.4e-37 159.8 107 78.5
PGSC0003DMG400016154 Solanum tuberosum HOM05D005499 ORTHO05D006666 1.4e-37 159.8 103 74.8
TPR.G3708 Trifolium pratense HOM05D005499 ORTHO05D006666 1.4e-37 159.8 102 77.5
AL3G10400 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 2.4e-37 159.1 107 72.9
arahy.Tifrunner.gnm1.ann1.C4BPDT Arachis hypogaea HOM05D005499 ORTHO05D006666 2.4e-37 159.1 102 79.4
Actinidia05936 Actinidia chinensis HOM05D005499 ORTHO05D006666 3.2e-37 158.7 101 80.2
Sc10g0004570 Simmondsia chinensis HOM05D005499 ORTHO05D006666 3.2e-37 158.7 103 73.8
AUR62036750 Chenopodium quinoa HOM05D005499 ORTHO05D006666 5.4e-37 157.9 102 75.5
arahy.Tifrunner.gnm1.ann1.JB8R4I Arachis hypogaea HOM05D005499 ORTHO05D006666 7.1e-37 157.5 102 78.4
Medtr6g078300 Medicago truncatula HOM05D005499 ORTHO05D006666 7.1e-37 157.5 102 77.5
Hund13392 Selenicereus undatus HOM05D005499 ORTHO05D006666 7.1e-37 157.5 101 78.2
CsaV3_4G031040 Cucumis sativus L. HOM05D005499 ORTHO05D006666 9.2e-37 157.1 102 76.5
unitig_32.g10669 Utricularia gibba HOM05D005499 ORTHO05D006666 9.2e-37 157.1 107 73.8
HPP92_006243 Vanilla planifolia HOM05D005499 ORTHO05D006666 9.2e-37 157.1 106 74.5
AUR62013851 Chenopodium quinoa HOM05D005499 ORTHO05D006666 2.7e-36 155.6 102 75.5
Glyma.05G073700 Glycine max HOM05D005499 ORTHO05D006666 2.7e-36 155.6 102 76.5
Potri.001G335600 Populus trichocarpa HOM05D005499 ORTHO05D006666 2.7e-36 155.6 102 76.5
CARHR075180 Cardamine hirsuta HOM05D005499 ORTHO05D006666 6.0e-36 154.5 91 82.4
Phvul.003G138900 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 6.0e-36 154.5 102 77.5
Phvul.003G139152 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 6.0e-36 154.5 102 77.5
Carub.0003s0032 Capsella rubella HOM05D005499 ORTHO05D006666 7.8e-36 154.1 107 71.0
Peaxi162Scf00016g00048 Petunia axillaris HOM05D005499 ORTHO05D006666 1.0e-35 153.7 98 75.5
TAR629G1334 Trochodendron aralioides HOM05D005499 ORTHO05D006666 1.0e-35 153.7 107 72.9
Sed0019428 Sechium edule HOM05D005499 ORTHO05D006666 1.3e-35 153.3 102 74.5
AT3G01740 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 1.7e-35 152.9 91 80.2
Ah.00g000560 Amaranthus hybridus HOM05D005499 ORTHO05D006666 3.0e-35 152.1 102 74.5
PGSC0003DMG400023637 Solanum tuberosum HOM05D005499 ORTHO05D006666 3.9e-35 151.8 103 71.8
Gohir.A05G341200 Gossypium hirsutum HOM05D005499 ORTHO05D006666 5.1e-35 151.4 98 81.6
THA.LOC104822403 Tarenaya hassleriana HOM05D005499 ORTHO05D006666 5.1e-35 151.4 90 81.1
PSO478G5160 Papaver somniferum HOM05D005499 ORTHO05D006666 8.6e-35 150.6 122 64.8
Sabra16G0216600 Salix brachista HOM05D005499 ORTHO05D006666 8.6e-35 150.6 102 74.5
A03p32370 Brassica napus HOM05D005499 ORTHO05D006666 1.5e-34 149.8 107 71.0
C03p39430 Brassica napus HOM05D005499 ORTHO05D006666 1.5e-34 149.8 107 71.0
BolC3t16211H Brassica oleracea HOM05D005499 ORTHO05D006666 1.5e-34 149.8 107 71.0
BraA03t12407Z Brassica rapa HOM05D005499 ORTHO05D006666 1.5e-34 149.8 107 71.0
Aa31LG5G10870 Aethionema arabicum HOM05D005499 ORTHO05D006666 1.9e-34 149.4 107 70.1
CARHR199040 Cardamine hirsuta HOM05D005499 ORTHO05D006666 1.9e-34 149.4 107 71.0
Sp3g00320 Schrenkiella parvula HOM05D005499 ORTHO05D006666 4.3e-34 148.3 91 79.1
Medtr4g073700 Medicago truncatula HOM05D005499 ORTHO05D006666 7.3e-34 147.5 102 75.5
CARHR105740 Cardamine hirsuta HOM05D005499 ORTHO05D006666 1.2e-33 146.7 91 78.0
Thhalv10021760m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 3.6e-33 145.2 91 76.9
PSO782G3924 Papaver somniferum HOM05D005499 ORTHO05D006666 3.6e-33 145.2 122 62.3
Thhalv10014999m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 8.1e-33 144.1 107 67.3
Cc07_g00480 Coffea canephora HOM05D005499 ORTHO05D006666 1.1e-32 143.7 107 70.1
EL10Ac2g02820 Beta vulgaris HOM05D005499 ORTHO05D006666 1.4e-32 143.3 102 72.5
CAN.G905.22 Capsicum annuum HOM05D005499 ORTHO05D006666 2.4e-32 142.5 100 69.0
Nitab4.5_0003764g0020 Nicotiana tabacum HOM05D005499 ORTHO05D006666 5.2e-32 141.4 103 68.0
AL6G24990 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 6.9e-32 141.0 100 69.0
ATR1098G108 Amborella trichopoda HOM05D005499 ORTHO05D006666 2.6e-31 139.0 97 73.2
Os12g0244200 Oryza sativa ssp. japonica HOM05D005499 ORTHO05D006666 2.6e-31 139.0 101 69.3
AT5G14290 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 3.4e-31 138.7 107 64.5
Psat7g172960 Pisum sativum HOM05D005499 ORTHO05D006666 5.8e-31 137.9 102 69.6
SHI11403 Sapria himalayana HOM05D005499 ORTHO05D006666 1.3e-30 136.7 105 63.8
Sed0018883 Sechium edule HOM05D005499 ORTHO05D006666 4.9e-30 134.8 93 73.1
Zm00001eb328460 Zea mays HOM05D005499 ORTHO05D006666 8.4e-30 134.0 113 62.8
PSO782G2325 Papaver somniferum HOM05D005499 ORTHO05D006666 4.2e-29 131.7 110 62.7
FAN21G0236 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.7e-27 126.3 90 71.1
SEGI_30393 Sequoiadendron giganteum HOM05D005499 ORTHO05D006666 5.6e-26 121.3 105 59.0
Nn1g08773 Nelumbo nucifera HOM05D005499 ORTHO05D006666 3.1e-24 115.5 119 58.0
Gohir.1Z049635 Gossypium hirsutum HOM05D005499 ORTHO05D006666 4.5e-23 111.7 77 75.3
FAN02G3728 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.8e-19 99.8 56 82.1
CBR_g38683 Chara braunii HOM05D005499 ORTHO05D006666 3.0e-19 99.0 105 50.5
Pp3c26_11040 Physcomitrium patens HOM05D005499 ORTHO05D006666 8.7e-19 97.4 90 53.3
Mapoly0005s0032 Marchantia polymorpha HOM05D005499 ORTHO05D006666 5.6e-18 94.7 112 45.5
AagrBONN_evm.TU.Sc2ySwM_362.2497 Anthoceros agrestis HOM05D005499 ORTHO05D006666 1.4e-16 90.1 89 49.4
CARHR266370 Cardamine hirsuta HOM05D005499 ORTHO05D006666 6.9e-16 87.8 52 78.8
SMO164G0004 Selaginella moellendorffii HOM05D005499 ORTHO05D006666 1.2e-15 87.0 101 46.5
TAR374G0914 Trochodendron aralioides HOM05D005499 ORTHO05D006666 3.3e-10 68.9 92 45.7
Cre12.g546000 Chlamydomonas reinhardtii HOM05D005499 ORTHO05D006666 1.6e-09 66.6 104 39.4
MCO16G647 Micromonas commoda HOM05D005499 ORTHO05D006666 2.6e-07 59.3 119 34.5


User provided reference genes

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