Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p046292 Quercus lobata HOM05D000566 ORTHO05D008456 5.9e-104 380.9 202 100.0
CiPaw.09G068300 Carya illinoinensis HOM05D000566 ORTHO05D008456 6.8e-76 287.7 201 78.6
Cfa000591 Carpinus fangiana HOM05D000566 ORTHO05D008456 1.7e-74 283.1 199 77.4
Haze_06259 Corylus avellana HOM05D000566 ORTHO05D008456 3.2e-73 278.9 199 76.9
Prupe.4G059300 Prunus persica HOM05D000566 ORTHO05D008456 4.9e-66 255.0 203 67.5
Ciclev10016472m.g Citrus clementina HOM05D000566 ORTHO05D008456 1.5e-62 243.4 182 72.0
TWI38G1860 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 1.9e-62 243.0 201 69.2
Gohir.A06G134006 Gossypium hirsutum HOM05D000566 ORTHO05D008456 2.5e-62 242.7 188 71.8
Atru.chr10.1700 Acer truncatum HOM05D000566 ORTHO05D008456 4.3e-62 241.9 185 70.8
Duzib192G0190 Durio zibethinus HOM05D000566 ORTHO05D008456 5.6e-62 241.5 200 68.0
RcHm_v2.0_Chr5g0010321 Rosa chinensis HOM05D000566 ORTHO05D008456 1.2e-61 240.4 202 63.4
Potri.011G064600 Populus trichocarpa HOM05D000566 ORTHO05D008456 2.1e-61 239.6 196 68.9
Sc05g0007190 Simmondsia chinensis HOM05D000566 ORTHO05D008456 2.1e-61 239.6 123 93.5
Gorai.010G158600 Gossypium raimondii HOM05D000566 ORTHO05D008456 3.6e-61 238.8 188 70.7
TAR626G0526 Trochodendron aralioides HOM05D000566 ORTHO05D008456 3.6e-61 238.8 206 67.0
COL.COLO4_31322 Corchorus olitorius HOM05D000566 ORTHO05D000686 6.2e-61 238.0 198 67.7
Dinv04627 Davidia involucrata HOM05D000566 ORTHO05D008456 8.0e-61 237.7 209 64.6
Gohir.D06G136400 Gossypium hirsutum HOM05D000566 ORTHO05D008456 1.1e-60 237.3 188 70.2
MD10G1282600 Malus domestica HOM05D000566 ORTHO05D008456 1.4e-60 236.9 203 63.1
Manes.16G037200 Manihot esculenta HOM05D000566 ORTHO05D008456 1.4e-60 236.9 207 65.2
vmacro03936 Vaccinium macrocarpon HOM05D000566 ORTHO05D008456 2.3e-60 236.1 213 64.3
MELO3C007220.2 Cucumis melo HOM05D000566 ORTHO05D008456 3.1e-60 235.7 198 67.7
Actinidia16807 Actinidia chinensis HOM05D000566 ORTHO05D008456 4.0e-60 235.3 121 92.6
FAN21G0306 Fragaria x ananassa HOM05D000566 ORTHO05D008456 4.0e-60 235.3 204 62.7
Rhsim13G0191700 Rhododendron simsii HOM05D000566 ORTHO05D000686 6.8e-60 234.6 187 69.0
FvH4_3g07991 Fragaria vesca HOM05D000566 ORTHO05D008456 8.9e-60 234.2 204 63.2
Lj4g0018718 Lotus japonicus HOM05D000566 ORTHO05D008456 1.5e-59 233.4 204 64.2
GSVIVG01021190001 Vitis vinifera HOM05D000566 ORTHO05D008456 2.0e-59 233.0 121 93.4
Psat7g118880 Pisum sativum HOM05D000566 ORTHO05D008456 3.4e-59 232.3 202 64.4
Sed0006380 Sechium edule HOM05D000566 ORTHO05D008456 3.4e-59 232.3 196 65.3
Hund23960 Selenicereus undatus HOM05D000566 ORTHO05D008456 3.4e-59 232.3 121 93.4
FAN11G2813 Fragaria x ananassa HOM05D000566 ORTHO05D008456 4.4e-59 231.9 204 62.7
CANSAT35G0195 Cannabis sativa HOM05D000566 ORTHO05D008456 5.8e-59 231.5 187 66.3
AUR62036584 Chenopodium quinoa HOM05D000566 ORTHO05D008456 5.8e-59 231.5 120 93.3
Ah.09g233690 Amaranthus hybridus HOM05D000566 ORTHO05D008456 7.5e-59 231.1 120 92.5
Ca_26053_v3 Cicer arietinum L. HOM05D000566 ORTHO05D008456 7.5e-59 231.1 125 89.6
Eucgr.E02712 Eucalyptus grandis HOM05D000566 ORTHO05D008456 7.5e-59 231.1 185 69.7
Thecc.06G173200 Theobroma cacao HOM05D000566 ORTHO05D008456 7.5e-59 231.1 205 63.9
ClCG01G023650 Citrullus lanatus HOM05D000566 ORTHO05D008456 9.8e-59 230.7 161 73.9
FAN25G1525 Fragaria x ananassa HOM05D000566 ORTHO05D000686 9.8e-59 230.7 157 73.9
Glyma.13G171000 Glycine max HOM05D000566 ORTHO05D008456 9.8e-59 230.7 125 90.4
Lalb_Chr16g0384251 Lupinus albus HOM05D000566 ORTHO05D008456 1.7e-58 229.9 209 62.2
Phvul.003G058300 Phaseolus vulgaris HOM05D000566 ORTHO05D008456 2.9e-58 229.2 200 63.5
Lalb_Chr05g0218771 Lupinus albus HOM05D000566 ORTHO05D008456 3.7e-58 228.8 151 77.5
VMungo0251G1655 Vigna mungo HOM05D000566 ORTHO05D008456 4.9e-58 228.4 126 86.5
Hma1.2p1_0437F.1_g152980 Hydrangea macrophylla HOM05D000566 ORTHO05D008456 6.4e-58 228.0 181 69.1
Sabra11G0046400 Salix brachista HOM05D000566 ORTHO05D008456 6.4e-58 228.0 196 65.3
TPR.G16280 Trifolium pratense HOM05D000566 ORTHO05D008456 6.4e-58 228.0 120 92.5
PSO541G3700 Papaver somniferum HOM05D000566 ORTHO05D008456 2.4e-57 226.1 201 62.2
PSO675G8854 Papaver somniferum HOM05D000566 ORTHO05D008456 3.2e-57 225.7 192 64.6
Aqoxy1G03201 Aquilegia oxysepala HOM05D000566 ORTHO05D008456 5.4e-57 224.9 123 87.0
PGR042G3563 Punica granatum HOM05D000566 ORTHO05D008456 5.4e-57 224.9 175 69.7
MBI06_g25985_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 9.2e-57 224.2 189 65.6
Medtr4g087750 Medicago truncatula HOM05D000566 ORTHO05D008456 9.2e-57 224.2 126 88.1
Cc02_g14640 Coffea canephora HOM05D000566 ORTHO05D008456 2.7e-56 222.6 121 88.4
Oeu039926.1 Olea europaea HOM05D000566 ORTHO05D008456 3.5e-56 222.2 121 89.3
HanXRQChr07g0186931 Helianthus annuus HOM05D000566 ORTHO05D008456 4.6e-56 221.9 176 66.5
PGSC0003DMG401022314 Solanum tuberosum HOM05D000566 ORTHO05D008456 1.0e-55 220.7 128 83.6
ECA234G0195 Erigeron canadensis HOM05D000566 ORTHO05D000686 1.3e-55 220.3 123 84.6
THA.LOC104814247 Tarenaya hassleriana HOM05D000566 ORTHO05D008456 2.3e-55 219.5 166 67.5
DCAR_004017 Daucus carota HOM05D000566 ORTHO05D008456 3.9e-55 218.8 123 84.6
Lsat_1_v5_gn_4_50020 Lactuca sativa HOM05D000566 ORTHO05D008456 3.9e-55 218.8 202 60.9
CAN.G337.143 Capsicum annuum HOM05D000566 ORTHO05D008456 5.1e-55 218.4 128 82.8
Sp1g24970 Schrenkiella parvula HOM05D000566 ORTHO05D008456 5.1e-55 218.4 158 69.6
SGA_v2.0_scaffold1G00030 Striga asiatica HOM05D000566 ORTHO05D008456 8.6e-55 217.6 121 86.8
CDE02G2902 Ceratophyllum demersum HOM05D000566 ORTHO05D008456 1.1e-54 217.2 121 87.6
Medtr4g087740 Medicago truncatula HOM05D000566 ORTHO05D008456 1.1e-54 217.2 143 79.0
Thhalv10009067m.g Eutrema salsugineum HOM05D000566 ORTHO05D008456 1.5e-54 216.9 121 84.3
MSTRG.7396 Avicennia marina HOM05D000566 ORTHO05D008456 1.9e-54 216.5 202 61.4
Peaxi162Scf01479g00012 Petunia axillaris HOM05D000566 ORTHO05D008456 1.9e-54 216.5 170 64.7
Zm00001eb162000 Zea mays HOM05D000566 ORTHO05D008456 3.3e-54 215.7 163 68.7
Solyc07g064690.1 Solanum lycopersicum HOM05D000566 ORTHO05D008456 5.6e-54 214.9 128 81.2
Sopen07g032890 Solanum pennellii HOM05D000566 ORTHO05D008456 5.6e-54 214.9 121 84.3
AT1G29040 Arabidopsis thaliana HOM05D000566 ORTHO05D008456 9.5e-54 214.2 160 68.8
Migut.M01050 Erythranthe guttata HOM05D000566 ORTHO05D008456 9.5e-54 214.2 206 59.7
Os01g0613300 Oryza sativa ssp. japonica HOM05D000566 ORTHO05D008456 9.5e-54 214.2 205 59.0
EL10Ac8g20507 Beta vulgaris HOM05D000566 ORTHO05D008456 1.2e-53 213.8 255 54.9
Carub.0001s2723 Capsella rubella HOM05D000566 ORTHO05D008456 1.6e-53 213.4 121 82.6
unitig_699.g19342 Utricularia gibba HOM05D000566 ORTHO05D008456 2.1e-53 213.0 191 62.3
AL1G42750 Arabidopsis lyrata HOM05D000566 ORTHO05D008456 3.6e-53 212.2 121 81.8
BcaB03g13911 Brassica carinata HOM05D000566 ORTHO05D008456 4.7e-53 211.8 121 82.6
CARHR028250 Cardamine hirsuta HOM05D000566 ORTHO05D008456 8.1e-53 211.1 121 81.8
A07p11000 Brassica napus HOM05D000566 ORTHO05D008456 1.1e-52 210.7 121 81.8
BraA07t28892Z Brassica rapa HOM05D000566 ORTHO05D008456 1.1e-52 210.7 121 81.8
HPP92_024140 Vanilla planifolia HOM05D000566 ORTHO05D008456 1.4e-52 210.3 121 85.1
SalBow8G0706 Salvia bowleyana HOM05D000566 ORTHO05D008456 1.8e-52 209.9 184 62.0
BcaC06g35392 Brassica carinata HOM05D000566 ORTHO05D008456 3.1e-52 209.1 121 81.0
C07p16640 Brassica napus HOM05D000566 ORTHO05D008456 4.0e-52 208.8 121 80.2
Lj2A297T108 Lonicera japonica HOM05D000566 ORTHO05D008456 5.2e-52 208.4 208 56.2
BolC7t42164H Brassica oleracea HOM05D000566 ORTHO05D008456 1.2e-51 207.2 119 81.5
ATR0602G168 Amborella trichopoda HOM05D000566 ORTHO05D008456 4.9e-50 201.8 188 60.6
Pp3c23_18520 Physcomitrium patens HOM05D000566 ORTHO05D008456 4.9e-50 201.8 119 76.5
Nitab4.5_0000206g0050 Nicotiana tabacum HOM05D000566 ORTHO05D008456 6.4e-50 201.4 121 81.0
Pp3c24_14610 Physcomitrium patens HOM05D000566 ORTHO05D008456 1.1e-49 200.7 121 75.2
Glyma.13G170900 Glycine max HOM05D000566 ORTHO05D008456 2.4e-49 199.5 125 76.8
Aa31LG6G11510 Aethionema arabicum HOM05D000566 ORTHO05D008456 1.2e-48 197.2 135 74.1
VMungo0251G1536 Vigna mungo HOM05D000566 ORTHO05D008456 1.3e-47 193.7 121 74.4
Peaxi162Scf01070g00226 Petunia axillaris HOM05D000566 ORTHO05D008456 3.0e-47 192.6 221 49.8
AUR62031167 Chenopodium quinoa HOM05D000566 ORTHO05D008456 7.3e-46 188.0 98 92.9
arahy.Tifrunner.gnm1.ann1.441UHN Arachis hypogaea HOM05D000566 ORTHO05D008456 2.1e-45 186.4 121 72.7
Glyma.04G136400 Glycine max HOM05D000566 ORTHO05D008456 2.1e-45 186.4 121 72.7
arahy.Tifrunner.gnm1.ann1.AZL87G Arachis hypogaea HOM05D000566 ORTHO05D008456 4.7e-45 185.3 121 71.9
SEGI_28108 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 3.8e-42 175.6 122 66.4
AagrBONN_evm.TU.Sc2ySwM_344.3192 Anthoceros agrestis HOM05D000566 ORTHO05D008456 1.9e-38 163.3 105 73.3
CsaV3_6G050800 Cucumis sativus L. HOM05D000566 ORTHO05D008456 4.0e-36 155.6 144 61.1
Nn1g04373 Nelumbo nucifera HOM05D000566 ORTHO05D008456 3.4e-35 152.5 108 75.9
Cpa.g.sc7.62 Carica papaya HOM05D000566 ORTHO05D008456 7.6e-35 151.4 147 62.6
FAN16G3553 Fragaria x ananassa HOM05D000566 ORTHO05D008456 7.1e-33 144.8 155 55.5
TWI38G1453 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 2.1e-29 133.3 119 63.0
MCO02G300 Micromonas commoda HOM05D000566 ORTHO05D008456 7.6e-27 124.8 121 52.9
Nitab4.5_0010317g0010 Nicotiana tabacum HOM05D000566 ORTHO05D008456 7.6e-27 124.8 80 76.2
PRCOL_00004523 Prasinoderma coloniale HOM05D000566 ORTHO05D008456 2.1e-21 106.7 119 48.7
Glyma.04G136500 Glycine max HOM05D000566 ORTHO05D008456 9.0e-20 101.3 70 68.6
TWI38G2220 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 2.6e-19 99.8 138 49.3
CSS0020746 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 2.7e-16 89.7 132 47.7
CSS0029795 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 2.7e-16 89.7 132 47.7
CSS0045665 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 6.0e-16 88.6 44 93.2
SEGI_18524 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 3.3e-14 82.8 42 92.9
SEGI_06418 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 5.7e-14 82.0 54 75.9
Sed0003601 Sechium edule HOM05D000566 ORTHO05D008456 9.6e-14 81.3 114 46.5
Cpa.g.sc7.61 Carica papaya HOM05D000566 ORTHO05D008456 7.6e-11 71.6 37 86.5
SEGI_34869 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 1.9e-09 67.0 42 71.4
MBI06_g25984_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 2.7e-08 63.2 52 63.5


User provided reference genes

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