Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p045625 Quercus lobata HOM05D014542 ORTHO05D000152 1.7e-182 642.5 324 100.0
QL09p053792 Quercus lobata HOM05D014542 ORTHO05D000152 3.4e-178 628.2 324 98.1
QL11p047905 Quercus lobata HOM05D014542 ORTHO05D000152 1.7e-177 625.9 324 97.8
QL02p096292 Quercus lobata HOM05D014542 ORTHO05D007045 4.6e-175 617.8 321 97.5
QL09p011162 Quercus lobata HOM05D014542 ORTHO05D000152 6.7e-158 560.8 283 99.6
QL04p026871 Quercus lobata HOM05D014542 ORTHO05D000152 4.5e-122 441.8 229 97.8
QL01p054457 Quercus lobata HOM05D014542 ORTHO05D000152 1.9e-120 436.4 229 96.5
QL10p013300 Quercus lobata HOM05D014542 ORTHO05D000152 9.8e-93 344.4 177 96.6
QL04p024009 Quercus lobata HOM05D000264 ORTHO05D000152 2.5e-40 170.2 189 50.8
QL04p023633 Quercus lobata HOM05D014542 ORTHO05D000152 1.3e-33 147.9 189 47.1
QL01p018981 Quercus lobata HOM05D000264 ORTHO05D000152 3.9e-33 146.4 142 57.7
QL02p056100 Quercus lobata HOM05D000264 ORTHO05D000152 6.3e-23 112.5 153 43.8
QL05p018838 Quercus lobata HOM05D000264 ORTHO05D000152 6.3e-23 112.5 153 43.8
QL05p018975 Quercus lobata HOM05D000264 ORTHO05D000152 6.3e-23 112.5 153 43.8
QL01p005925 Quercus lobata HOM05D014542 ORTHO05D000152 8.8e-17 92.0 152 40.8
QL01p006014 Quercus lobata HOM05D000264 ORTHO05D000152 1.1e-16 91.7 151 38.4
QL01p006033 Quercus lobata HOM05D000264 ORTHO05D000152 5.7e-16 89.4 152 41.4
CSS0040861 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 6.9e-14 82.4 138 35.5
Dinv02172 Davidia involucrata HOM05D000264 ORTHO05D000152 7.7e-13 79.0 151 35.1
Sc06g0005980 Simmondsia chinensis HOM05D000264 ORTHO05D000152 1.9e-11 74.3 191 33.0
Dinv02173 Davidia involucrata HOM05D000264 ORTHO05D000152 3.2e-11 73.6 146 34.9
CSS0035240 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 6.1e-10 69.3 163 35.0
THA.LOC104801174 Tarenaya hassleriana HOM05D000264 ORTHO05D000152 6.1e-10 69.3 162 33.3
Lj1C726T14 Lonicera japonica HOM05D000264 ORTHO05D000152 1.0e-09 68.6 149 36.9
Sc06g0006110 Simmondsia chinensis HOM05D000264 ORTHO05D000152 1.0e-09 68.6 138 36.2
Sc07g0003560 Simmondsia chinensis HOM05D000264 ORTHO05D000152 1.0e-09 68.6 173 33.5
Rhsim06G0145100 Rhododendron simsii HOM05D000264 ORTHO05D000152 2.3e-09 67.4 162 32.1
GSVIVG01020530001 Vitis vinifera HOM05D000264 ORTHO05D000152 3.0e-09 67.0 155 31.6
TAR624G1302 Trochodendron aralioides HOM05D000264 ORTHO05D000152 3.9e-09 66.6 131 33.6
Sc07g0003540 Simmondsia chinensis HOM05D000264 ORTHO05D000152 6.7e-09 65.9 201 30.3
Zm00001eb215410 Zea mays HOM05D000264 ORTHO05D000152 1.5e-08 64.7 120 35.8
Rhsim06G0144300 Rhododendron simsii HOM05D000264 ORTHO05D000152 2.0e-08 64.3 160 31.2
Prupe.4G145300 Prunus persica HOM05D000264 ORTHO05D000152 2.6e-08 63.9 143 32.2
GSVIVG01013597001 Vitis vinifera HOM05D000264 ORTHO05D000152 2.6e-08 63.9 93 38.7
Actinidia11043 Actinidia chinensis HOM05D000264 ORTHO05D000152 4.4e-08 63.2 133 36.8
Ciclev10007078m.g Citrus clementina HOM05D000264 ORTHO05D000152 7.4e-08 62.4 133 32.3
CARHR100500 Cardamine hirsuta HOM05D000264 ORTHO05D000152 9.7e-08 62.0 157 31.2
Dinv44627 Davidia involucrata HOM05D000264 ORTHO05D000152 1.3e-07 61.6 113 31.9
CSS0003414 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 1.7e-07 61.2 171 30.4
EL10Ac2g04709 Beta vulgaris HOM05D007624 ORTHO05D010285 2.2e-07 60.8 129 31.8
CSS0045559 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 2.2e-07 60.8 140 32.9
TAR624G0511 Trochodendron aralioides HOM05D000264 ORTHO05D000152 2.2e-07 60.8 98 38.8
Dinv29923 Davidia involucrata HOM05D000264 ORTHO05D000152 2.8e-07 60.5 115 32.2
GSVIVG01001633001 Vitis vinifera HOM05D000264 ORTHO05D000152 2.8e-07 60.5 95 35.8
Prupe.4G144700 Prunus persica HOM05D000264 ORTHO05D000152 4.8e-07 59.7 148 27.7
CARHR002990 Cardamine hirsuta HOM05D000264 ORTHO05D000152 8.2e-07 58.9 147 31.3
Prupe.7G182300 Prunus persica HOM05D000264 ORTHO05D000152 8.2e-07 58.9 156 29.5
Eucgr.K00973 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.1e-06 58.5 132 33.3
Eucgr.K01000 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.1e-06 58.5 128 34.4
vmacro12288 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 1.1e-06 58.5 138 33.3
CSS0028437 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 1.4e-06 58.2 133 30.1
AT4G03490 Arabidopsis thaliana HOM05D000264 ORTHO05D000152 2.4e-06 57.4 169 29.0
BcaB01g01946 Brassica carinata HOM05D000264 ORTHO05D000152 4.1e-06 56.6 164 29.9
RcHm_v2.0_Chr2g0109301 Rosa chinensis HOM05D000264 ORTHO05D000152 4.1e-06 56.6 144 29.9
CSS0009763 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 5.3e-06 56.2 132 33.3
GSVIVG01020905001 Vitis vinifera HOM05D000264 ORTHO05D000152 5.3e-06 56.2 157 30.6
Ah.08g218070 Amaranthus hybridus HOM05D007624 ORTHO05D010285 9.1e-06 55.5 94 36.2
Cfa008447 Carpinus fangiana HOM05D000264 ORTHO05D000152 9.1e-06 55.5 121 31.4


User provided reference genes

Program Settings