Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p041285 Quercus lobata HOM05D007285 ORTHO05D009224 4.0e-35 151.0 81 100.0
Haze_06424 Corylus avellana HOM05D007285 ORTHO05D009224 1.4e-27 125.9 80 83.8
CiPaw.09G061300 Carya illinoinensis HOM05D007285 ORTHO05D009224 2.0e-26 122.1 80 80.0
FvH4_3g08990 Fragaria vesca HOM05D007285 ORTHO05D009224 9.8e-26 119.8 83 80.7
FAN16G1611 Fragaria x ananassa HOM05D007285 ORTHO05D009224 9.8e-26 119.8 83 80.7
FAN21G1653 Fragaria x ananassa HOM05D007285 ORTHO05D009224 2.9e-25 118.2 79 79.7
FAN25G3510 Fragaria x ananassa HOM05D007285 ORTHO05D009224 2.9e-25 118.2 83 79.5
COL.COLO4_31450 Corchorus olitorius HOM05D007285 ORTHO05D009224 6.4e-25 117.1 80 75.0
Thecc.06G185100 Theobroma cacao HOM05D007285 ORTHO05D009224 1.4e-24 115.9 80 76.2
RcHm_v2.0_Chr5g0008721 Rosa chinensis HOM05D007285 ORTHO05D009224 1.8e-24 115.5 81 80.2
Prupe.4G049200 Prunus persica HOM05D007285 ORTHO05D009224 3.2e-24 114.8 80 77.5
Atru.chr10.1858 Acer truncatum HOM05D007285 ORTHO05D009224 9.2e-24 113.2 80 72.5
Hma1.2p1_0208F.1_g088230 Hydrangea macrophylla HOM05D007285 ORTHO05D009224 9.2e-24 113.2 79 74.7
Ca_18554_v3 Cicer arietinum L. HOM05D007285 ORTHO05D009224 2.7e-23 111.7 79 73.4
Potri.004G045400 Populus trichocarpa HOM05D007285 ORTHO05D009224 2.7e-23 111.7 70 81.4
MD00G1116000 Malus domestica HOM05D007285 ORTHO05D009224 4.6e-23 110.9 80 75.0
Ciclev10017252m.g Citrus clementina HOM05D007285 ORTHO05D009224 5.9e-23 110.5 80 75.0
Gohir.D06G133300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 5.9e-23 110.5 80 71.2
Manes.17G046800 Manihot esculenta HOM05D007285 ORTHO05D009224 5.9e-23 110.5 80 75.0
Gorai.010G155100 Gossypium raimondii HOM05D007285 ORTHO05D009224 1.0e-22 109.8 80 71.2
MD10G1292600 Malus domestica HOM05D007285 ORTHO05D009224 1.3e-22 109.4 80 75.0
CsaV3_1G012400 Cucumis sativus L. HOM05D007285 ORTHO05D009224 1.7e-22 109.0 80 71.2
Actinidia07587 Actinidia chinensis HOM05D007285 ORTHO05D009224 6.6e-22 107.1 79 75.9
Medtr4g088680 Medicago truncatula HOM05D007285 ORTHO05D009224 6.6e-22 107.1 76 73.7
Gohir.A06G129300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 8.6e-22 106.7 80 68.8
Sed0001788 Sechium edule HOM05D007285 ORTHO05D009224 8.6e-22 106.7 80 70.0
Actinidia26129 Actinidia chinensis HOM05D007285 ORTHO05D009224 1.5e-21 105.9 79 74.7
Dinv40575 Davidia involucrata HOM05D007285 ORTHO05D009224 1.5e-21 105.9 79 72.2
Hund23773 Selenicereus undatus HOM05D007285 ORTHO05D009224 1.5e-21 105.9 79 70.9
Sed0014393 Sechium edule HOM05D007285 ORTHO05D009224 1.9e-21 105.5 80 70.0
ClCG03G008150 Citrullus lanatus HOM05D007285 ORTHO05D009224 2.5e-21 105.1 80 70.0
Glyma.13G178000 Glycine max HOM05D007285 ORTHO05D009224 2.5e-21 105.1 82 70.7
Rhsim02G0132100 Rhododendron simsii HOM05D007285 ORTHO05D009224 2.5e-21 105.1 79 70.9
TWI38G2229 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 2.5e-21 105.1 80 68.8
TWI63G1057 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 2.5e-21 105.1 80 70.0
Psat7g114520 Pisum sativum HOM05D007285 ORTHO05D009224 5.6e-21 104.0 75 76.0
Sabra04G0028300 Salix brachista HOM05D007285 ORTHO05D009224 7.3e-21 103.6 69 78.3
CSS0032734 Camellia sinensis var. sinensis HOM05D007285 ORTHO05D009224 9.5e-21 103.2 79 70.9
TPR.G16329 Trifolium pratense HOM05D007285 ORTHO05D009224 9.5e-21 103.2 79 70.9
Glyma.07G198400 Glycine max HOM05D007285 ORTHO05D009224 1.2e-20 102.8 82 69.5
PGR042G2867 Punica granatum HOM05D007285 ORTHO05D009224 1.6e-20 102.4 79 69.6
ECA234G4273 Erigeron canadensis HOM05D007285 ORTHO05D009224 2.1e-20 102.1 80 72.5
Nitab4.5_0005745g0020 Nicotiana tabacum HOM05D007285 ORTHO05D009224 2.8e-20 101.7 79 69.6
Phvul.002G229600 Phaseolus vulgaris HOM05D007285 ORTHO05D009224 2.8e-20 101.7 70 77.1
arahy.Tifrunner.gnm1.ann1.J7N80D Arachis hypogaea HOM05D007285 ORTHO05D009224 3.6e-20 101.3 80 67.5
arahy.Tifrunner.gnm1.ann1.VSLT1W Arachis hypogaea HOM05D007285 ORTHO05D009224 3.6e-20 101.3 80 67.5
Peaxi162Scf00623g00519 Petunia axillaris HOM05D007285 ORTHO05D009224 3.6e-20 101.3 82 68.3
Lj4g0016922 Lotus japonicus HOM05D007285 ORTHO05D009224 4.7e-20 100.9 79 70.9
MSTRG.7339 Avicennia marina HOM05D007285 ORTHO05D009224 8.0e-20 100.1 79 72.2
DCAR_008032 Daucus carota HOM05D007285 ORTHO05D009224 8.0e-20 100.1 78 70.5
THA.LOC104820545 Tarenaya hassleriana HOM05D007285 ORTHO05D009224 8.0e-20 100.1 80 65.0
VMungo0251G0987 Vigna mungo HOM05D007285 ORTHO05D009224 8.0e-20 100.1 70 75.7
Dinv17325 Davidia involucrata HOM05D007285 ORTHO05D009224 1.1e-19 99.8 79 70.9
Migut.M01131 Erythranthe guttata HOM05D007285 ORTHO05D009224 1.1e-19 99.8 79 69.6
Sopen02g022850 Solanum pennellii HOM05D007285 ORTHO05D009224 1.1e-19 99.8 79 69.6
Solyc02g078010.4 Solanum lycopersicum HOM05D007285 ORTHO05D009224 1.4e-19 99.4 79 69.6
PGSC0003DMG401029703 Solanum tuberosum HOM05D007285 ORTHO05D009224 1.4e-19 99.4 79 69.6
Carub.0001s2669 Capsella rubella HOM05D007285 ORTHO05D009224 2.3e-19 98.6 80 61.2
CARHR027740 Cardamine hirsuta HOM05D007285 ORTHO05D009224 3.1e-19 98.2 80 63.8
Lsat_1_v5_gn_4_52261 Lactuca sativa HOM05D007285 ORTHO05D009224 3.1e-19 98.2 79 70.9
AT1G28250 Arabidopsis thaliana HOM05D007285 ORTHO05D009224 4.0e-19 97.8 70 68.6
SGA_v2.0_scaffold100G29692 Striga asiatica HOM05D007285 ORTHO05D009224 4.0e-19 97.8 79 70.9
AL1G41800 Arabidopsis lyrata HOM05D007285 ORTHO05D009224 5.2e-19 97.4 77 64.9
SalBow8G5072 Salvia bowleyana HOM05D007285 ORTHO05D009224 5.2e-19 97.4 69 73.9
AUR62017028 Chenopodium quinoa HOM05D007285 ORTHO05D009224 6.8e-19 97.1 79 65.8
HanXRQChr14g0435131 Helianthus annuus HOM05D007285 ORTHO05D009224 1.5e-18 95.9 79 69.6
EL10Ac8g20395 Beta vulgaris HOM05D007285 ORTHO05D009224 2.0e-18 95.5 79 64.6
DCAR_004065 Daucus carota HOM05D007285 ORTHO05D009224 2.0e-18 95.5 80 68.8
Aa31LG6G10160 Aethionema arabicum HOM05D007285 ORTHO05D009224 3.4e-18 94.7 80 62.5
vmacro15913 Vaccinium macrocarpon HOM05D007285 ORTHO05D009224 3.4e-18 94.7 80 66.2
CAN.G529.14 Capsicum annuum HOM05D007285 ORTHO05D009224 4.4e-18 94.4 79 67.1
Cc02_g13540 Coffea canephora HOM05D007285 ORTHO05D009224 5.8e-18 94.0 79 65.8
MELO3C002614.2 Cucumis melo HOM05D007285 ORTHO05D009224 5.8e-18 94.0 69 71.0
Sc05g0007570 Simmondsia chinensis HOM05D007285 ORTHO05D009224 7.5e-18 93.6 79 67.1
BcaB07g32433 Brassica carinata HOM05D007285 ORTHO05D009224 1.3e-17 92.8 80 60.0
CANSAT35G0751 Cannabis sativa HOM05D007285 ORTHO05D009224 1.3e-17 92.8 81 61.7
BcaB03g12118 Brassica carinata HOM05D007285 ORTHO05D009224 1.7e-17 92.4 80 57.5
BolC3t19748H Brassica oleracea HOM05D007285 ORTHO05D009224 1.7e-17 92.4 80 57.5
Eucgr.E03264 Eucalyptus grandis HOM05D007285 ORTHO05D009224 1.7e-17 92.4 81 65.4
Lalb_Chr15g0089751 Lupinus albus HOM05D007285 ORTHO05D009224 8.3e-17 90.1 76 63.2
SalBow8G3155 Salvia bowleyana HOM05D007285 ORTHO05D009224 1.1e-16 89.7 60 76.7
Ah.09g237440 Amaranthus hybridus HOM05D007285 ORTHO05D009224 1.4e-16 89.4 79 58.2
A09p37820 Brassica napus HOM05D007285 ORTHO05D009224 2.4e-16 88.6 77 58.4
BraA09t39294Z Brassica rapa HOM05D007285 ORTHO05D009224 2.4e-16 88.6 77 58.4
BcaC05g26830 Brassica carinata HOM05D007285 ORTHO05D009224 3.2e-16 88.2 77 58.4
C05p27060 Brassica napus HOM05D007285 ORTHO05D009224 3.2e-16 88.2 70 61.4
BolC5t31425H Brassica oleracea HOM05D007285 ORTHO05D009224 3.2e-16 88.2 77 58.4
Thhalv10009792m.g Eutrema salsugineum HOM05D007285 ORTHO05D009224 5.4e-16 87.4 89 55.1
unitig_27.g24965 Utricularia gibba HOM05D007285 ORTHO05D009224 1.2e-15 86.3 68 66.2
Nn1g04136 Nelumbo nucifera HOM05D007285 ORTHO05D009224 1.3e-14 82.8 75 64.0
TAR626G1757 Trochodendron aralioides HOM05D007285 ORTHO05D009224 8.6e-14 80.1 69 63.8
BcaC01g00030 Brassica carinata HOM05D007285 ORTHO05D009224 3.3e-13 78.2 106 43.4
PSO541G0778 Papaver somniferum HOM05D007285 ORTHO05D009224 7.3e-13 77.0 79 54.4
C03p74970 Brassica napus HOM05D007285 ORTHO05D009224 2.8e-12 75.1 106 42.5
CDE01G0551 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 1.4e-11 72.8 69 55.1
HPP92_007016 Vanilla planifolia HOM05D007285 ORTHO05D009224 1.5e-10 69.3 78 52.6
Zm00001eb305570 Zea mays HOM05D007285 ORTHO05D009224 1.3e-09 66.2 79 48.1
ATR0763G085 Amborella trichopoda HOM05D007285 ORTHO05D009224 2.2e-09 65.5 75 49.3
SEGI_38595 Sequoiadendron giganteum HOM05D007285 ORTHO05D009224 2.9e-09 65.1 72 48.6
Pp3c8_510 Physcomitrium patens HOM05D007285 ORTHO05D009224 1.2e-07 59.7 68 50.0
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 2.1e-07 58.9 65 52.3
Mapoly0007s0165 Marchantia polymorpha HOM05D007285 ORTHO05D009224 2.3e-06 55.5 77 42.9


User provided reference genes

Program Settings