Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p032445 Quercus lobata HOM05D001961 ORTHO05D015590 0.0e+00 1136.3 620 100.0
QL05p016329 Quercus lobata HOM05D001961 ORTHO05D002286 3.7e-189 665.6 837 54.2
QL05p016288 Quercus lobata HOM05D001961 ORTHO05D002286 7.1e-108 395.6 903 35.5
QL05p016944 Quercus lobata HOM05D001961 ORTHO05D002286 4.6e-107 392.9 864 36.8
QL05p016929 Quercus lobata HOM05D001961 ORTHO05D002286 3.6e-96 356.7 845 37.3
QL05p016885 Quercus lobata HOM05D001961 ORTHO05D002286 1.8e-95 354.4 875 35.3
QL05p016300 Quercus lobata HOM05D001961 ORTHO05D002286 1.3e-85 321.6 796 34.4
QL05p014721 Quercus lobata HOM05D001961 ORTHO05D002286 4.4e-65 253.4 658 33.9
QL05p016954 Quercus lobata HOM05D001961 ORTHO05D002286 2.8e-64 250.8 518 38.2
QL05p017074 Quercus lobata HOM05D001961 ORTHO05D002286 3.7e-64 250.4 518 37.6
QL05p014726 Quercus lobata HOM05D001961 ORTHO05D002286 1.6e-59 235.0 874 29.9
QL05p016973 Quercus lobata HOM05D001961 ORTHO05D015590 1.7e-48 198.4 482 35.5
QL05p015531 Quercus lobata HOM05D001961 ORTHO05D002286 2.8e-48 197.6 568 32.2
QL05p017088 Quercus lobata HOM05D001961 ORTHO05D015590 1.6e-46 191.8 740 31.2
QL05p016130 Quercus lobata HOM05D001961 ORTHO05D002286 3.8e-45 187.2 588 31.0
QL05p015549 Quercus lobata HOM05D001961 ORTHO05D002286 4.5e-38 163.7 608 28.6
QL05p016138 Quercus lobata HOM05D001961 ORTHO05D002286 5.0e-37 160.2 609 28.6
QL05p017027 Quercus lobata HOM05D001961 ORTHO05D002286 6.8e-34 149.8 709 27.8
QL05p017038 Quercus lobata HOM05D001961 ORTHO05D015590 2.0e-30 138.3 733 29.2
Haze_05896 Corylus avellana HOM05D001961 ORTHO05D002286 7.5e-25 119.8 242 34.7
Haze_05897 Corylus avellana HOM05D001961 ORTHO05D002286 6.4e-24 116.7 241 33.2
Cfa000802 Carpinus fangiana HOM05D001961 ORTHO05D002286 7.0e-23 113.2 239 32.2
Cfa009758 Carpinus fangiana HOM05D001961 ORTHO05D002286 6.2e-19 100.1 441 25.2
Cfa021166 Carpinus fangiana HOM05D001961 ORTHO05D002286 6.2e-19 100.1 441 25.2
QL05p016906 Quercus lobata HOM05D001961 ORTHO05D015590 3.1e-18 97.8 76 80.3
QL05p016244 Quercus lobata HOM05D001961 ORTHO05D015590 1.7e-16 92.0 85 63.5
QL05p016939 Quercus lobata HOM05D001961 ORTHO05D015590 2.4e-15 88.2 82 62.2
Cfa009801 Carpinus fangiana HOM05D001961 ORTHO05D002286 5.4e-15 87.0 416 23.6
Dinv19903 Davidia involucrata HOM05D001961 ORTHO05D002286 3.5e-14 84.3 194 36.6
CiPaw.14G120700 Carya illinoinensis HOM05D001961 ORTHO05D002286 6.0e-14 83.6 173 35.3
Lj9C457G12 Lonicera japonica HOM05D001961 ORTHO05D002286 7.8e-14 83.2 183 37.2
Potri.015G066500 Populus trichocarpa HOM05D001961 ORTHO05D002286 1.7e-13 82.0 193 37.8
Peaxi162Scf00689g00564 Petunia axillaris HOM05D001961 ORTHO05D002286 3.0e-13 81.3 238 34.9
Dinv38651 Davidia involucrata HOM05D001961 ORTHO05D002286 5.0e-13 80.5 306 28.8
QL05p015555 Quercus lobata HOM05D001961 ORTHO05D015590 6.6e-13 80.1 168 38.7
QL05p016151 Quercus lobata HOM05D001961 ORTHO05D015590 6.6e-13 80.1 168 38.7
Cfa009804 Carpinus fangiana HOM05D001961 ORTHO05D002286 1.1e-12 79.3 489 23.5
Sopen06g027420 Solanum pennellii HOM05D001961 ORTHO05D002286 1.1e-12 79.3 192 34.9
PSO832G1192 Papaver somniferum HOM05D001961 ORTHO05D002286 1.5e-12 79.0 191 34.6
PSO591G0439 Papaver somniferum HOM05D001961 ORTHO05D002286 1.9e-12 78.6 207 33.3
RcHm_v2.0_Chr7g0180371 Rosa chinensis HOM05D001961 ORTHO05D002286 1.9e-12 78.6 192 37.0
Cfa009760 Carpinus fangiana HOM05D001961 ORTHO05D002286 2.5e-12 78.2 140 34.3
Manes.06G097300 Manihot esculenta HOM05D001961 ORTHO05D002286 2.5e-12 78.2 190 36.3
Haze_07394 Corylus avellana HOM05D001961 ORTHO05D002286 3.3e-12 77.8 193 35.8
Cfa019014 Carpinus fangiana HOM05D001961 ORTHO05D002286 4.3e-12 77.4 303 29.7
TAR374G1240 Trochodendron aralioides HOM05D001961 ORTHO05D002286 4.3e-12 77.4 194 36.6
Oeu039544.2 Olea europaea HOM05D001961 ORTHO05D002286 7.3e-12 76.6 196 36.2
TAR622G0827 Trochodendron aralioides HOM05D001961 ORTHO05D002286 7.3e-12 76.6 198 36.4
PGSC0003DMG400033067 Solanum tuberosum HOM05D001961 ORTHO05D002286 9.5e-12 76.3 192 34.4
Haze_23170 Corylus avellana HOM05D001961 ORTHO05D015590 1.2e-11 75.9 69 58.0
Manes.14G073702 Manihot esculenta HOM05D001961 ORTHO05D002286 1.6e-11 75.5 191 35.1
Gohir.A03G064400 Gossypium hirsutum HOM05D001961 ORTHO05D002286 2.8e-11 74.7 197 33.5
QL10p014874 Quercus lobata HOM05D001961 ORTHO05D002286 3.6e-11 74.3 198 32.8
DCAR_021541 Daucus carota HOM05D001961 ORTHO05D002286 4.7e-11 73.9 201 32.8
Atru.chr9.2337 Acer truncatum HOM05D001961 ORTHO05D002286 1.1e-10 72.8 194 35.1
Ciclev10018472m.g Citrus clementina HOM05D001961 ORTHO05D002286 1.1e-10 72.8 194 34.0
Solyc06g071120.3 Solanum lycopersicum HOM05D001961 ORTHO05D002286 1.1e-10 72.8 239 31.4
CSS0014551 Camellia sinensis var. sinensis HOM05D001961 ORTHO05D002286 1.4e-10 72.4 193 35.2
CSS0045618 Camellia sinensis var. sinensis HOM05D001961 ORTHO05D002286 1.4e-10 72.4 193 35.2
CiPaw.13G162000 Carya illinoinensis HOM05D001961 ORTHO05D015590 1.8e-10 72.0 74 52.7
Gohir.A11G028810 Gossypium hirsutum HOM05D001961 ORTHO05D002286 1.8e-10 72.0 191 37.2
Gohir.D03G090700 Gossypium hirsutum HOM05D001961 ORTHO05D002286 1.8e-10 72.0 197 33.0
Gorai.003G070500 Gossypium raimondii HOM05D001961 ORTHO05D002286 1.8e-10 72.0 197 33.0
Haze_23167 Corylus avellana HOM05D001961 ORTHO05D015590 5.2e-10 70.5 69 55.1
Gohir.D11G032100 Gossypium hirsutum HOM05D001961 ORTHO05D002286 6.8e-10 70.1 191 36.6
Lj5C117T8 Lonicera japonica HOM05D001961 ORTHO05D002286 8.9e-10 69.7 74 54.1
PSO161G0006 Papaver somniferum HOM05D001961 ORTHO05D002286 8.9e-10 69.7 168 34.5
CiPaw.11G036500 Carya illinoinensis HOM05D001961 ORTHO05D002286 1.2e-09 69.3 194 36.1
GSVIVG01032594001 Vitis vinifera HOM05D001961 ORTHO05D010262 1.2e-09 69.3 257 30.4
GSVIVG01008079001 Vitis vinifera HOM05D001961 ORTHO05D002286 1.5e-09 68.9 208 25.0
TWI60G1556 Tripterygium wilfordii HOM05D001961 ORTHO05D002286 2.0e-09 68.6 186 33.9
ClCG06G016460 Citrullus lanatus HOM05D001961 ORTHO05D002286 2.6e-09 68.2 210 31.9
Potri.012G071900 Populus trichocarpa HOM05D001961 ORTHO05D002286 3.4e-09 67.8 74 54.1
Gorai.007G034900 Gossypium raimondii HOM05D001961 ORTHO05D002286 4.4e-09 67.4 191 36.1
EL10Ac5g10921 Beta vulgaris HOM05D001961 ORTHO05D002286 7.5e-09 66.6 208 31.2
Oeu006172.1 Olea europaea HOM05D001961 ORTHO05D002286 9.8e-09 66.2 263 29.7
TWI15G0443 Tripterygium wilfordii HOM05D001961 ORTHO05D002286 9.8e-09 66.2 190 32.6
Lsat_1_v5_gn_5_18460 Lactuca sativa HOM05D001961 ORTHO05D002286 1.3e-08 65.9 179 34.1
Sopen03g032420 Solanum pennellii HOM05D001961 ORTHO05D002286 1.3e-08 65.9 194 34.0
BcaC01g01766 Brassica carinata HOM05D001961 ORTHO05D002286 1.7e-08 65.5 154 34.4
CAN.G628.49 Capsicum annuum HOM05D001961 ORTHO05D002286 1.7e-08 65.5 189 32.3
FvH4_5g15740 Fragaria vesca HOM05D001961 ORTHO05D002286 1.7e-08 65.5 93 41.9
FAN08G2604 Fragaria x ananassa HOM05D001961 ORTHO05D002286 1.7e-08 65.5 82 46.3
FAN13G0464 Fragaria x ananassa HOM05D001961 ORTHO05D002286 1.7e-08 65.5 82 46.3
FAN18G4418 Fragaria x ananassa HOM05D001961 ORTHO05D002286 1.7e-08 65.5 93 41.9
Prupe.5G184600 Prunus persica HOM05D001961 ORTHO05D002286 2.2e-08 65.1 192 29.7
Sc04g0002330 Simmondsia chinensis HOM05D001961 ORTHO05D002286 2.2e-08 65.1 207 30.0
Hund02679 Selenicereus undatus HOM05D001961 ORTHO05D002286 2.9e-08 64.7 82 45.1
Duzib068G1318 Durio zibethinus HOM05D001961 ORTHO05D002286 3.7e-08 64.3 74 50.0
MD14G1192000 Malus domestica HOM05D001961 ORTHO05D002286 3.7e-08 64.3 192 29.7
Solyc03g113370.3 Solanum lycopersicum HOM05D001961 ORTHO05D002286 3.7e-08 64.3 194 33.5
PGSC0003DMG400013181 Solanum tuberosum HOM05D001961 ORTHO05D002286 3.7e-08 64.3 193 32.6
FAN04G1134 Fragaria x ananassa HOM05D001961 ORTHO05D002286 4.9e-08 63.9 82 45.1
Lj1g0021908 Lotus japonicus HOM05D001961 ORTHO05D002286 4.9e-08 63.9 196 32.1
Oeu006173.1 Olea europaea HOM05D001961 ORTHO05D002286 4.9e-08 63.9 182 33.5
Nn3g17102 Nelumbo nucifera HOM05D001961 ORTHO05D002286 6.4e-08 63.5 194 34.0
Oeu022619.1 Olea europaea HOM05D001961 ORTHO05D002286 8.3e-08 63.2 171 33.3
SalBow7G0691 Salvia bowleyana HOM05D001961 ORTHO05D002286 8.3e-08 63.2 164 31.1
CARHR156620 Cardamine hirsuta HOM05D001961 ORTHO05D002286 1.1e-07 62.8 191 31.4
Lalb_Chr13g0298141 Lupinus albus HOM05D001961 ORTHO05D002286 1.1e-07 62.8 74 50.0
MD06G1185800 Malus domestica HOM05D001961 ORTHO05D002286 1.1e-07 62.8 195 32.8
unitig_744.g24389 Utricularia gibba HOM05D001961 ORTHO05D002286 1.1e-07 62.8 198 31.3
AUR62021754 Chenopodium quinoa HOM05D001961 ORTHO05D002286 1.4e-07 62.4 93 39.8
Eucgr.B00398 Eucalyptus grandis HOM05D001961 ORTHO05D002286 1.4e-07 62.4 72 48.6
PSO161G0094 Papaver somniferum HOM05D001961 ORTHO05D002286 1.4e-07 62.4 188 29.8
TPR.G38388 Trifolium pratense HOM05D001961 ORTHO05D002286 1.4e-07 62.4 233 32.6
MSTRG.11404 Avicennia marina HOM05D001961 ORTHO05D002286 1.9e-07 62.0 166 35.5
Dinv33700 Davidia involucrata HOM05D001961 ORTHO05D002286 1.9e-07 62.0 183 35.5
Lj4g0028007 Lotus japonicus HOM05D001961 ORTHO05D002286 1.9e-07 62.0 74 48.6
PSO210G7105 Papaver somniferum HOM05D001961 ORTHO05D002286 1.9e-07 62.0 213 24.9
Actinidia09230 Actinidia chinensis HOM05D001961 ORTHO05D002286 2.4e-07 61.6 113 39.8
Ah.02g113120 Amaranthus hybridus HOM05D001961 ORTHO05D002286 2.4e-07 61.6 85 47.1
Cc04_g15890 Coffea canephora HOM05D001961 ORTHO05D002286 2.4e-07 61.6 162 29.6
Duzib205G1945 Durio zibethinus HOM05D001961 ORTHO05D002286 2.4e-07 61.6 189 29.6
Lsat_1_v5_gn_1_11560 Lactuca sativa HOM05D001961 ORTHO05D002286 2.4e-07 61.6 93 45.2
Lalb_Chr12g0201211 Lupinus albus HOM05D001961 ORTHO05D002286 2.4e-07 61.6 74 48.6
VMungo1215G0372 Vigna mungo HOM05D001961 ORTHO05D002286 2.4e-07 61.6 194 32.5
CARHR156630 Cardamine hirsuta HOM05D001961 ORTHO05D002286 3.2e-07 61.2 326 23.6
CDE07G1845 Ceratophyllum demersum HOM05D001961 ORTHO05D002286 3.2e-07 61.2 80 41.2
Nitab4.5_0000909g0070 Nicotiana tabacum HOM05D001961 ORTHO05D002286 3.2e-07 61.2 193 32.6
Migut.I00114 Erythranthe guttata HOM05D001961 ORTHO05D002286 4.1e-07 60.8 283 27.2
Glyma.05G031000 Glycine max HOM05D001961 ORTHO05D002286 4.1e-07 60.8 74 47.3
Glyma.17G095800 Glycine max HOM05D001961 ORTHO05D002286 4.1e-07 60.8 86 46.5
MBI04_g20667_MAGBIO Magnolia biondii HOM05D001961 ORTHO05D002286 4.1e-07 60.8 192 29.7
QL05p016983 Quercus lobata HOM05D001961 ORTHO05D337253 4.1e-07 60.8 171 38.0
TWI81G0197 Tripterygium wilfordii HOM05D001961 ORTHO05D002286 4.1e-07 60.8 74 45.9
Zm00001eb005070 Zea mays HOM05D001961 ORTHO05D002286 4.1e-07 60.8 229 29.3
ATR1153G111 Amborella trichopoda HOM05D001961 ORTHO05D002286 5.4e-07 60.5 188 29.8
AUR62008343 Chenopodium quinoa HOM05D001961 ORTHO05D002286 5.4e-07 60.5 93 38.7
Medtr4g107470 Medicago truncatula HOM05D001961 ORTHO05D002286 5.4e-07 60.5 232 31.9
PGR083G2262 Punica granatum HOM05D001961 ORTHO05D002286 5.4e-07 60.5 188 31.4
GSVIVG01032595001 Vitis vinifera HOM05D001961 ORTHO05D002286 5.4e-07 60.5 200 27.5
MBI04_g20669_MAGBIO Magnolia biondii HOM05D001961 ORTHO05D002286 7.1e-07 60.1 384 25.0
Ca_21858_v3 Cicer arietinum L. HOM05D001961 ORTHO05D002286 9.2e-07 59.7 234 32.1
Sabra15G0091600 Salix brachista HOM05D001961 ORTHO05D002286 9.2e-07 59.7 191 33.0
Hund09373 Selenicereus undatus HOM05D001961 ORTHO05D002286 9.2e-07 59.7 69 49.3
Nn4g23006 Nelumbo nucifera HOM05D001961 ORTHO05D002286 1.2e-06 59.3 74 45.9
Oeu022639.1 Olea europaea HOM05D001961 ORTHO05D002286 1.2e-06 59.3 55 56.4
AL5G27230 Arabidopsis lyrata HOM05D001961 ORTHO05D002286 1.6e-06 58.9 266 30.1
Phvul.003G194200 Phaseolus vulgaris HOM05D001961 ORTHO05D002286 1.6e-06 58.9 194 33.5
Thecc.03G077100 Theobroma cacao HOM05D001961 ORTHO05D002286 1.6e-06 58.9 104 37.5
CAN.G999.31 Capsicum annuum HOM05D001961 ORTHO05D002286 2.1e-06 58.5 195 31.3
Rhsim08G0161300 Rhododendron simsii HOM05D001961 ORTHO05D002286 2.1e-06 58.5 112 34.8
Sabra12G0051100 Salix brachista HOM05D001961 ORTHO05D002286 2.1e-06 58.5 178 32.0
CsaV3_1G002070 Cucumis sativus L. HOM05D001961 ORTHO05D002286 2.7e-06 58.2 191 31.4
MBI01_g01232_MAGBIO Magnolia biondii HOM05D001961 ORTHO05D002286 2.7e-06 58.2 299 22.7
vmacro19421 Vaccinium macrocarpon HOM05D001961 ORTHO05D002286 2.7e-06 58.2 188 30.3
Actinidia37665 Actinidia chinensis HOM05D001961 ORTHO05D002286 3.5e-06 57.8 67 47.8
Carub.0005s1403 Capsella rubella HOM05D001961 ORTHO05D002286 3.5e-06 57.8 221 23.5
HanXRQChr08g0236941 Helianthus annuus HOM05D001961 ORTHO05D002286 3.5e-06 57.8 207 30.9
Nitab4.5_0000003g0050 Nicotiana tabacum HOM05D001961 ORTHO05D002286 3.5e-06 57.8 210 31.0
Cc04_g15870 Coffea canephora HOM05D001961 ORTHO05D002286 4.6e-06 57.4 162 29.6
COL.COLO4_35465 Corchorus olitorius HOM05D001961 ORTHO05D002286 4.6e-06 57.4 189 30.2
Thhalv10010060m.g Eutrema salsugineum HOM05D001961 ORTHO05D002286 4.6e-06 57.4 196 30.6
SalBow5G1786 Salvia bowleyana HOM05D001961 ORTHO05D002286 4.6e-06 57.4 72 45.8
SGA_v2.0_scaffold7G04090 Striga asiatica HOM05D001961 ORTHO05D002286 4.6e-06 57.4 184 28.3
Haze_05891 Corylus avellana HOM05D001961 ORTHO05D002286 6.0e-06 57.0 135 34.1
Dinv33705 Davidia involucrata HOM05D001961 ORTHO05D002286 6.0e-06 57.0 183 33.3
Sed0025522 Sechium edule HOM05D001961 ORTHO05D002286 7.8e-06 56.6 111 36.9


User provided reference genes

Program Settings