Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p032336 Quercus lobata HOM05D056629 ORTHO05D337778 1.6e-58 229.2 111 100.0
QL12p037740 Quercus lobata HOM05D056629 ORTHO05D337136 3.6e-55 218.0 106 99.1
QL05p016178 Quercus lobata HOM05D000446 ORTHO05D000321 5.3e-22 107.8 196 37.8
QL05p016235 Quercus lobata HOM05D000446 ORTHO05D000321 1.5e-21 106.3 197 36.5
QL05p016268 Quercus lobata HOM05D000446 ORTHO05D000321 2.0e-21 105.9 196 37.2
QL03p042217 Quercus lobata HOM05D000446 ORTHO05D000321 1.2e-13 80.1 196 31.1
QL03p042181 Quercus lobata HOM05D000446 ORTHO05D000321 1.5e-13 79.7 196 30.6
QL03p042255 Quercus lobata HOM05D000446 ORTHO05D000321 1.9e-08 62.8 161 27.3
QL03p042286 Quercus lobata HOM05D000446 ORTHO05D000321 3.3e-08 62.0 76 40.8
Nn3g18187 Nelumbo nucifera HOM05D000446 ORTHO05D000321 1.3e-07 60.1 98 39.8
QL03p042327 Quercus lobata HOM05D000446 ORTHO05D000321 1.7e-07 59.7 78 37.2
QL03p042377 Quercus lobata HOM05D000446 ORTHO05D000321 1.7e-07 59.7 78 37.2
QL03p042477 Quercus lobata HOM05D000446 ORTHO05D000321 1.7e-07 59.7 78 37.2
QL03p042655 Quercus lobata HOM05D000446 ORTHO05D000321 1.7e-07 59.7 78 37.2
QL03p042425 Quercus lobata HOM05D000446 ORTHO05D000321 2.2e-07 59.3 78 37.2
Manes.15G119100 Manihot esculenta HOM05D000446 ORTHO05D000321 6.3e-07 57.8 78 37.2
Sed0022494 Sechium edule HOM05D000446 ORTHO05D000321 6.3e-07 57.8 65 41.5
GSVIVG01017660001 Vitis vinifera HOM05D000446 ORTHO05D000321 6.3e-07 57.8 164 26.8
Eucgr.D00316 Eucalyptus grandis HOM05D000446 ORTHO05D000321 8.2e-07 57.4 48 50.0
Hma1.2p1_0137F.1_g062410 Hydrangea macrophylla HOM05D000446 ORTHO05D000321 8.2e-07 57.4 78 35.9
Manes.15G119201 Manihot esculenta HOM05D000446 ORTHO05D000321 8.2e-07 57.4 78 37.2
Aqoxy4G00713_Aqoxy4G00714 Aquilegia oxysepala HOM05D000446 ORTHO05D000321 1.1e-06 57.0 79 36.7
COL.COLO4_02915 Corchorus olitorius HOM05D000446 ORTHO05D000321 1.1e-06 57.0 51 52.9
COL.COLO4_19314 Corchorus olitorius HOM05D000446 ORTHO05D000321 2.4e-06 55.8 47 51.1
Eucgr.B01815 Eucalyptus grandis HOM05D000446 ORTHO05D000321 3.1e-06 55.5 48 50.0
Nn2g15115 Nelumbo nucifera HOM05D000446 ORTHO05D000321 3.1e-06 55.5 47 51.1
Thecc.10G005000 Theobroma cacao HOM05D000446 ORTHO05D000321 3.1e-06 55.5 80 38.8
MBI19_g32715_MAGBIO Magnolia biondii HOM05D000446 ORTHO05D000321 4.1e-06 55.1 80 38.8
MD05G1288600 Malus domestica HOM05D000446 ORTHO05D000001 4.1e-06 55.1 78 35.9
QL03p042589 Quercus lobata HOM05D000446 ORTHO05D000321 4.1e-06 55.1 51 52.9
QL03p042610 Quercus lobata HOM05D000446 ORTHO05D000321 4.1e-06 55.1 51 52.9
RcHm_v2.0_Chr5g0013421 Rosa chinensis HOM05D000446 ORTHO05D000321 5.3e-06 54.7 78 37.2
Atru.chr10.1341 Acer truncatum HOM05D000446 ORTHO05D000321 6.9e-06 54.3 78 35.9
MBI18_g09622_MAGBIO Magnolia biondii HOM05D000446 ORTHO05D000321 6.9e-06 54.3 76 34.2
FvH4_3g05990 Fragaria vesca HOM05D000446 ORTHO05D000321 9.1e-06 53.9 78 37.2
FAN11G0641 Fragaria x ananassa HOM05D000446 ORTHO05D000321 9.1e-06 53.9 78 37.2
FAN21G0408 Fragaria x ananassa HOM05D000446 ORTHO05D000321 9.1e-06 53.9 78 37.2
FAN25G1501 Fragaria x ananassa HOM05D000446 ORTHO05D000321 9.1e-06 53.9 78 37.2
Thecc.10G004800 Theobroma cacao HOM05D000446 ORTHO05D000321 9.1e-06 53.9 33 66.7


User provided reference genes

Program Settings