Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p020400 Quercus lobata HOM05D002526 ORTHO05D010157 5.6e-167 590.9 302 100.0
QL05p030835 Quercus lobata HOM05D002526 ORTHO05D010157 5.6e-167 590.9 302 100.0
CiPaw.01G248800 Carya illinoinensis HOM05D002526 ORTHO05D004039 8.5e-107 391.0 279 77.1
Haze_16568 Corylus avellana HOM05D002526 ORTHO05D004039 4.0e-104 382.1 299 70.9
Prupe.3G088600 Prunus persica HOM05D002526 ORTHO05D010157 6.3e-94 348.2 302 63.2
MD17G1213300 Malus domestica HOM05D002526 ORTHO05D010157 1.4e-93 347.1 297 63.0
Dinv30612 Davidia involucrata HOM05D002526 ORTHO05D004039 5.2e-88 328.6 285 64.2
RcHm_v2.0_Chr2g0135091 Rosa chinensis HOM05D002526 ORTHO05D010157 1.2e-87 327.4 296 61.5
FvH4_6g29541 Fragaria vesca HOM05D002526 ORTHO05D010157 2.7e-84 316.2 287 59.9
FAN14G4319 Fragaria x ananassa HOM05D002526 ORTHO05D010157 2.7e-84 316.2 290 59.7
TWI18G0347 Tripterygium wilfordii HOM05D002526 ORTHO05D010157 1.0e-83 314.3 274 60.9
Hma1.2p1_0242F.1_g100630 Hydrangea macrophylla HOM05D002526 ORTHO05D010157 5.0e-83 312.0 302 59.3
Actinidia15756 Actinidia chinensis HOM05D002526 ORTHO05D010157 9.5e-82 307.8 302 58.6
CSS0025449 Camellia sinensis var. sinensis HOM05D002526 ORTHO05D004039 1.8e-80 303.5 263 61.6
Atru.chr1.2906 Acer truncatum HOM05D002526 ORTHO05D010157 5.2e-80 302.0 279 61.6
vmacro19003 Vaccinium macrocarpon HOM05D002526 ORTHO05D010157 2.9e-78 296.2 287 58.9
Hund00650 Selenicereus undatus HOM05D002526 ORTHO05D010157 2.4e-77 293.1 273 60.4
Hund00651 Selenicereus undatus HOM05D002526 ORTHO05D010157 4.1e-77 292.4 273 60.4
Thecc.06G028700 Theobroma cacao HOM05D002526 ORTHO05D010157 1.6e-76 290.4 271 61.3
Gorai.009G127500 Gossypium raimondii HOM05D002526 ORTHO05D010157 3.5e-76 289.3 291 57.7
Ciclev10024867m.g Citrus clementina HOM05D002526 ORTHO05D004039 1.0e-75 287.7 285 57.2
Nn2g12105 Nelumbo nucifera HOM05D002526 ORTHO05D010157 1.7e-75 287.0 298 56.0
Potri.001G202300 Populus trichocarpa HOM05D002526 ORTHO05D010157 5.0e-75 285.4 275 60.4
Gohir.A05G122650 Gossypium hirsutum HOM05D002526 ORTHO05D010157 4.3e-74 282.3 266 59.8
Duzib192G0551 Durio zibethinus HOM05D002526 ORTHO05D010157 5.6e-74 282.0 232 66.8
Manes.04G112150 Manihot esculenta HOM05D002526 ORTHO05D004039 5.6e-74 282.0 279 58.1
CANSAT56G1960 Cannabis sativa HOM05D002526 ORTHO05D010157 3.1e-72 276.2 275 58.5
CAN.G407.78 Capsicum annuum HOM05D002526 ORTHO05D000105 6.8e-72 275.0 291 53.6
Nitab4.5_0003463g0050 Nicotiana tabacum HOM05D001442 ORTHO05D001369 1.2e-71 274.2 307 52.8
GSVIVG01017348001 Vitis vinifera HOM05D002526 ORTHO05D004039 2.0e-71 273.5 280 55.7
Peaxi162Scf00332g00625 Petunia axillaris HOM05D002526 ORTHO05D010157 5.8e-71 271.9 302 52.3
PGSC0003DMG400000622 Solanum tuberosum HOM05D002526 ORTHO05D010157 2.2e-70 270.0 311 50.8
Solyc03g116770.3 Solanum lycopersicum HOM05D002526 ORTHO05D010157 4.9e-70 268.9 311 49.8
Sopen03g035690 Solanum pennellii HOM05D002526 ORTHO05D010157 5.4e-69 265.4 312 49.4
Nitab4.5_0008560g0050 Nicotiana tabacum HOM05D001442 ORTHO05D010157 7.0e-69 265.0 306 51.3
COL.COLO4_11933 Corchorus olitorius HOM05D002526 ORTHO05D004039 1.2e-68 264.2 231 64.9
Lj5A73G68 Lonicera japonica HOM05D002526 ORTHO05D010157 8.6e-67 258.1 298 53.0
Aqoxy7G03644 Aquilegia oxysepala HOM05D002526 ORTHO05D010157 1.4e-64 250.8 306 51.3
Cc04_g04450 Coffea canephora HOM05D002526 ORTHO05D010157 8.9e-64 248.1 287 51.6
Actinidia01740 Actinidia chinensis HOM05D002526 ORTHO05D010157 5.8e-63 245.4 268 54.9
FAN02G2169 Fragaria x ananassa HOM05D002526 ORTHO05D010157 5.8e-63 245.4 255 55.3
Thhalv10008365m.g Eutrema salsugineum HOM05D002526 ORTHO05D010157 8.3e-62 241.5 267 49.8
THA.LOC104812514 Tarenaya hassleriana HOM05D002526 ORTHO05D010157 1.9e-61 240.4 268 50.7
Sp1g13640 Schrenkiella parvula HOM05D002526 ORTHO05D010157 2.4e-61 240.0 267 49.1
BraA06t24312Z Brassica rapa HOM05D002526 ORTHO05D010157 3.2e-61 239.6 277 49.1
Lsat_1_v5_gn_4_88500 Lactuca sativa HOM05D002526 ORTHO05D010157 9.2e-61 238.0 260 50.4
AL1G27410 Arabidopsis lyrata HOM05D002526 ORTHO05D010157 4.6e-60 235.7 242 51.7
A06p11330 Brassica napus HOM05D002526 ORTHO05D010157 7.8e-60 235.0 278 48.6
BolC5t30082H Brassica oleracea HOM05D002526 ORTHO05D010157 7.8e-60 235.0 293 46.4
Aa31LG7G90 Aethionema arabicum HOM05D002526 ORTHO05D010157 1.0e-59 234.6 281 48.4
Carub.0001s1507 Capsella rubella HOM05D002526 ORTHO05D010157 3.0e-59 233.0 233 52.8
AUR62011678 Chenopodium quinoa HOM05D002526 ORTHO05D010157 9.5e-58 228.0 280 48.6
Migut.I00757 Erythranthe guttata HOM05D002526 ORTHO05D010157 1.2e-57 227.6 297 45.8
SGA_v2.0_scaffold5G02704 Striga asiatica HOM05D002526 ORTHO05D010157 1.2e-57 227.6 241 52.3
CARHR015850 Cardamine hirsuta HOM05D002526 ORTHO05D010157 2.8e-57 226.5 242 50.4
AUR62016503 Chenopodium quinoa HOM05D002526 ORTHO05D010157 2.8e-57 226.5 300 46.7
EL10Ac9g22041 Beta vulgaris HOM05D002526 ORTHO05D010157 8.1e-57 224.9 305 46.6
SalBow2G1951 Salvia bowleyana HOM05D002526 ORTHO05D010157 1.4e-56 224.2 281 47.0
Oeu045127.1 Olea europaea HOM05D002526 ORTHO05D010157 2.3e-56 223.4 217 56.7
AT1G15320 Arabidopsis thaliana HOM05D002526 ORTHO05D010157 6.8e-56 221.9 233 51.9
PGR102G2637 Punica granatum HOM05D002526 ORTHO05D010157 6.8e-56 221.9 258 50.8
Gohir.D05G123550 Gossypium hirsutum HOM05D002526 ORTHO05D010157 2.6e-55 219.9 182 65.4
ECA232G1362 Erigeron canadensis HOM05D002526 ORTHO05D010157 1.1e-53 214.5 264 46.2
BcaC05g25469 Brassica carinata HOM05D002526 ORTHO05D010157 1.9e-53 213.8 254 48.4
Sc15g0001450 Simmondsia chinensis HOM05D002526 ORTHO05D010157 1.5e-50 204.1 235 49.8
PSO161G0040 Papaver somniferum HOM05D002526 ORTHO05D010157 9.6e-50 201.4 255 45.9
DCAR_025516 Daucus carota HOM05D002526 ORTHO05D004039 3.2e-45 186.4 254 47.2
C05p13450 Brassica napus HOM05D002526 ORTHO05D010157 1.3e-43 181.0 184 54.3
Ah.01g021710 Amaranthus hybridus HOM05D002526 ORTHO05D010157 1.1e-42 177.9 262 43.1
FAN02G0105 Fragaria x ananassa HOM05D002526 ORTHO05D010157 4.0e-40 169.5 113 75.2
Cpa.g.sc938.3 Carica papaya HOM05D002526 ORTHO05D010157 3.6e-33 146.4 221 42.5
unitig_0.g1112 Utricularia gibba HOM05D002081 ORTHO05D002088 2.9e-30 136.7 253 34.8
BcaC03g16017 Brassica carinata HOM05D002526 ORTHO05D010157 1.5e-23 114.4 110 50.0
BcaC01g00573 Brassica carinata HOM05D002526 ORTHO05D010157 3.8e-22 109.8 140 42.9
C09p66980 Brassica napus HOM05D002526 ORTHO05D010157 4.3e-18 96.3 126 42.9
BcaC02g09864 Brassica carinata HOM05D002526 ORTHO05D010157 1.6e-17 94.4 274 28.1
C02p37700 Brassica napus HOM05D002526 ORTHO05D010157 2.4e-16 90.5 265 27.5
BolC4t25223H Brassica oleracea HOM05D002526 ORTHO05D010157 2.4e-16 90.5 269 27.9
BolC2t09789H Brassica oleracea HOM05D002526 ORTHO05D010157 6.9e-16 89.0 265 27.5
C04p35770 Brassica napus HOM05D002526 ORTHO05D010157 9.0e-16 88.6 269 27.5
SEGI_27567 Sequoiadendron giganteum HOM05D002526 ORTHO05D010157 2.0e-15 87.4 227 26.4
SEGI_30845 Sequoiadendron giganteum HOM05D002526 ORTHO05D010157 1.0e-14 85.1 217 27.6
C03p81490 Brassica napus HOM05D002526 ORTHO05D010157 1.3e-14 84.7 265 27.5
BolC3t20420H Brassica oleracea HOM05D002526 ORTHO05D010157 1.3e-14 84.7 265 27.5
HPP92_021873 Vanilla planifolia HOM05D002526 ORTHO05D010157 2.5e-13 80.5 219 32.9
C03p75300 Brassica napus HOM05D002526 ORTHO05D010157 8.7e-11 72.0 266 26.3
BolC3t19789H Brassica oleracea HOM05D002526 ORTHO05D010157 7.4e-10 68.9 102 38.2


User provided reference genes

Program Settings