Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p030359 Quercus lobata HOM05D002557 ORTHO05D002563 8.0e-123 443.7 218 100.0
QL03p041323 Quercus lobata HOM05D002557 ORTHO05D002563 2.6e-41 172.9 361 37.7
QL03p041389 Quercus lobata HOM05D002557 ORTHO05D002563 1.2e-38 164.1 412 33.7
QL05p030299 Quercus lobata HOM05D002557 ORTHO05D002563 4.8e-35 152.1 86 86.0
CiPaw.05G163700 Carya illinoinensis HOM05D002557 ORTHO05D002563 1.1e-31 141.0 412 31.6
QL05p030304 Quercus lobata HOM05D002557 ORTHO05D002563 2.3e-29 133.3 95 77.9
Dinv02580 Davidia involucrata HOM05D002557 ORTHO05D002563 5.7e-28 128.6 417 29.7
Manes.17G092500 Manihot esculenta HOM05D002557 ORTHO05D002563 1.7e-27 127.1 411 29.2
Haze_01578 Corylus avellana HOM05D002557 ORTHO05D002563 1.5e-25 120.6 91 68.1
Gohir.D02G139100 Gossypium hirsutum HOM05D002557 ORTHO05D002563 3.4e-25 119.4 414 29.0
Gorai.005G158000 Gossypium raimondii HOM05D002557 ORTHO05D002563 3.4e-25 119.4 414 29.0
Gohir.A03G116000 Gossypium hirsutum HOM05D002557 ORTHO05D002563 5.9e-25 118.6 414 29.0
Duzib251G0507 Durio zibethinus HOM05D002557 ORTHO05D002563 2.2e-24 116.7 414 28.0
Thecc.02G298300 Theobroma cacao HOM05D002557 ORTHO05D002563 4.2e-23 112.5 410 27.8
MD16G1009200 Malus domestica HOM05D002557 ORTHO05D002563 1.2e-22 110.9 412 27.9
GSVIVG01010276001 Vitis vinifera HOM05D002557 ORTHO05D002563 1.6e-22 110.5 416 27.9
MD13G1012500 Malus domestica HOM05D002557 ORTHO05D002563 1.8e-21 107.1 397 28.2
Actinidia37468 Actinidia chinensis HOM05D002557 ORTHO05D002563 2.3e-21 106.7 86 65.1
Prupe.1G341400 Prunus persica HOM05D002557 ORTHO05D002563 9.7e-20 101.3 418 27.0
vmacro10777 Vaccinium macrocarpon HOM05D002557 ORTHO05D002563 1.7e-19 100.5 88 61.4
COL.COLO4_27532 Corchorus olitorius HOM05D002557 ORTHO05D002563 4.8e-19 99.0 416 26.7
TAR622G0274 Trochodendron aralioides HOM05D002557 ORTHO05D002563 4.8e-19 99.0 415 26.0
Potri.008G142800 Populus trichocarpa HOM05D002557 ORTHO05D002563 8.2e-19 98.2 413 26.4
Ah.03g147140 Amaranthus hybridus HOM05D002557 ORTHO05D002563 1.4e-18 97.4 87 58.6
CANSAT78G0539 Cannabis sativa HOM05D002557 ORTHO05D002563 1.4e-18 97.4 408 27.2
Haze_01579 Corylus avellana HOM05D002557 ORTHO05D002563 1.4e-18 97.4 172 41.9
DCAR_030326 Daucus carota HOM05D002557 ORTHO05D002563 1.8e-18 97.1 85 62.4
Duzib268G0161 Durio zibethinus HOM05D002557 ORTHO05D002563 2.4e-18 96.7 388 27.1
Actinidia12423 Actinidia chinensis HOM05D002557 ORTHO05D002563 3.1e-18 96.3 85 61.2
Sc03g0005500 Simmondsia chinensis HOM05D002557 ORTHO05D002563 3.1e-18 96.3 88 56.8
Atru.chr11.1078 Acer truncatum HOM05D002557 ORTHO05D002563 4.1e-18 95.9 411 28.2
Oeu062079.1 Olea europaea HOM05D002557 ORTHO05D002563 4.1e-18 95.9 85 56.5
Nn4g24811 Nelumbo nucifera HOM05D002557 ORTHO05D002563 5.3e-18 95.5 412 26.9
AUR62017782 Chenopodium quinoa HOM05D002557 ORTHO05D002563 1.2e-17 94.4 87 59.8
AUR62003473 Chenopodium quinoa HOM05D002557 ORTHO05D002563 4.5e-17 92.4 85 60.0
Cc11_g03300 Coffea canephora HOM05D002557 ORTHO05D002563 7.7e-17 91.7 86 58.1
Eucgr.B02622 Eucalyptus grandis HOM05D002557 ORTHO05D002563 7.7e-17 91.7 412 26.7
Thecc.01G377200 Theobroma cacao HOM05D002557 ORTHO05D002563 7.7e-17 91.7 390 26.7
Oeu001131.1 Olea europaea HOM05D002557 ORTHO05D002563 1.0e-16 91.3 85 55.3
Hma1.2p1_0513F.1_g169530 Hydrangea macrophylla HOM05D002557 ORTHO05D002563 2.2e-16 90.1 91 54.9
TWI74G0827 Tripterygium wilfordii HOM05D002557 ORTHO05D002563 2.9e-16 89.7 408 26.5
Potri.010G098800 Populus trichocarpa HOM05D002557 ORTHO05D002563 6.5e-16 88.6 93 53.8
Rhsim09G0080400 Rhododendron simsii HOM05D002557 ORTHO05D002563 6.5e-16 88.6 81 60.5
Sabra10G0071300 Salix brachista HOM05D002557 ORTHO05D002563 8.5e-16 88.2 85 55.3
MELO3C020075.2 Cucumis melo HOM05D002557 ORTHO05D002563 1.1e-15 87.8 82 57.3
Lj6C725T28 Lonicera japonica HOM05D002557 ORTHO05D002563 1.1e-15 87.8 89 61.8
TAR374G0464 Trochodendron aralioides HOM05D002557 ORTHO05D002563 3.2e-15 86.3 408 26.0
CsaV3_5G012900 Cucumis sativus L. HOM05D002557 ORTHO05D002563 5.5e-15 85.5 82 56.1
FvH4_4g36080 Fragaria vesca HOM05D002557 ORTHO05D002563 5.5e-15 85.5 90 50.0
FAN17G2204 Fragaria x ananassa HOM05D002557 ORTHO05D002563 9.4e-15 84.7 86 50.0
RcHm_v2.0_Chr4g0445701 Rosa chinensis HOM05D002557 ORTHO05D002563 9.4e-15 84.7 90 47.8
Hund12797 Selenicereus undatus HOM05D002557 ORTHO05D002563 9.4e-15 84.7 86 55.8
TWI77G0239 Tripterygium wilfordii HOM05D002557 ORTHO05D002563 9.4e-15 84.7 408 26.5
EL10Ac6g15401 Beta vulgaris HOM05D002557 ORTHO05D002563 1.6e-14 84.0 86 55.8
ClCG11G000930 Citrullus lanatus HOM05D002557 ORTHO05D002563 1.6e-14 84.0 87 54.0
FAN12G2627 Fragaria x ananassa HOM05D002557 ORTHO05D002563 1.6e-14 84.0 86 51.2
ATR0807G182 Amborella trichopoda HOM05D002557 ORTHO05D002563 3.6e-14 82.8 87 51.7
Cpa.g.sc2.94 Carica papaya HOM05D002557 ORTHO05D002563 3.6e-14 82.8 395 26.3
Ciclev10005240m.g Citrus clementina HOM05D002557 ORTHO05D002563 3.6e-14 82.8 163 39.3
Aqoxy3G04176 Aquilegia oxysepala HOM05D002557 ORTHO05D002563 4.7e-14 82.4 82 54.9
VMungo0251G3689 Vigna mungo HOM05D002557 ORTHO05D002563 6.1e-14 82.0 90 51.1
THA.LOC104805119 Tarenaya hassleriana HOM05D002557 ORTHO05D002563 8.0e-14 81.6 418 25.4
Lsat_1_v5_gn_4_21881 Lactuca sativa HOM05D002557 ORTHO05D002563 1.0e-13 81.3 93 51.6
Glyma.08G267900 Glycine max HOM05D002557 ORTHO05D002563 1.4e-13 80.9 90 51.1
Glyma.16G100500 Glycine max HOM05D002557 ORTHO05D002563 1.8e-13 80.5 90 52.2
Peaxi162Scf00329g00935 Petunia axillaris HOM05D002557 ORTHO05D002563 1.8e-13 80.5 193 31.1
PGSC0003DMG400029482 Solanum tuberosum HOM05D002557 ORTHO05D002563 1.8e-13 80.5 88 50.0
TAR374G0678 Trochodendron aralioides HOM05D002557 ORTHO05D002563 1.8e-13 80.5 97 48.5
TAR374G0885 Trochodendron aralioides HOM05D002557 ORTHO05D002563 1.8e-13 80.5 97 48.5
Psat4g111880 Pisum sativum HOM05D002557 ORTHO05D002563 2.3e-13 80.1 106 46.2
Ca_22531_v3 Cicer arietinum L. HOM05D002557 ORTHO05D002563 3.0e-13 79.7 89 50.6
ECA234G0623 Erigeron canadensis HOM05D002557 ORTHO05D002563 3.0e-13 79.7 104 46.2
CAN.G458.8 Capsicum annuum HOM05D002557 ORTHO05D002563 4.0e-13 79.3 86 48.8
HanXRQChr08g0224381 Helianthus annuus HOM05D002557 ORTHO05D002563 5.2e-13 79.0 88 50.0
MBI06_g25394_MAGBIO Magnolia biondii HOM05D002557 ORTHO05D002563 5.2e-13 79.0 87 51.7
Phvul.003G282600 Phaseolus vulgaris HOM05D002557 ORTHO05D002563 5.2e-13 79.0 91 50.5
Nitab4.5_0000129g0480 Nicotiana tabacum HOM05D002557 ORTHO05D002563 6.7e-13 78.6 86 48.8
Nitab4.5_0006607g0010 Nicotiana tabacum HOM05D002557 ORTHO05D002563 8.8e-13 78.2 86 48.8
Lj4g0010787 Lotus japonicus HOM05D002557 ORTHO05D002563 1.2e-12 77.8 85 52.9
Solyc04g008510.3 Solanum lycopersicum HOM05D002557 ORTHO05D002563 1.2e-12 77.8 88 48.9
ECA233G3057 Erigeron canadensis HOM05D002557 ORTHO05D002563 1.5e-12 77.4 111 44.1
Sopen04g003660 Solanum pennellii HOM05D002557 ORTHO05D002563 1.5e-12 77.4 88 48.9
MSTRG.2089 Avicennia marina HOM05D002557 ORTHO05D002563 2.0e-12 77.0 101 51.5
FAN22G2254 Fragaria x ananassa HOM05D002557 ORTHO05D002563 2.0e-12 77.0 85 48.2
HanXRQChr17g0568711 Helianthus annuus HOM05D002557 ORTHO05D002563 2.0e-12 77.0 86 54.7
Lalb_Chr09g0334561 Lupinus albus HOM05D002557 ORTHO05D002563 2.0e-12 77.0 91 46.2
PSO782G3229 Papaver somniferum HOM05D002557 ORTHO05D002563 2.6e-12 76.6 92 48.9
Oeu044054.1 Olea europaea HOM05D002557 ORTHO05D002563 3.3e-12 76.3 104 46.2
Sed0012874 Sechium edule HOM05D002557 ORTHO05D002563 3.3e-12 76.3 115 43.5
SGA_v2.0_scaffold127G33969 Striga asiatica HOM05D002557 ORTHO05D002563 3.3e-12 76.3 84 50.0
Lalb_Chr05g0229091 Lupinus albus HOM05D002557 ORTHO05D002563 5.7e-12 75.5 89 46.1
THA.LOC104824106 Tarenaya hassleriana HOM05D002557 ORTHO05D002563 5.7e-12 75.5 97 45.4
Medtr8g070760 Medicago truncatula HOM05D002557 ORTHO05D002563 7.5e-12 75.1 86 47.7
Os04g0670800 Oryza sativa ssp. japonica HOM05D002557 ORTHO05D002563 7.5e-12 75.1 83 45.8
Carub.0001s1433 Capsella rubella HOM05D002557 ORTHO05D002563 9.7e-12 74.7 114 42.1
PGR044G0319 Punica granatum HOM05D002557 ORTHO05D002563 9.7e-12 74.7 83 50.6
Lsat_1_v5_gn_8_33860 Lactuca sativa HOM05D002557 ORTHO05D002563 1.3e-11 74.3 160 38.1
AL1G26540 Arabidopsis lyrata HOM05D002557 ORTHO05D002563 1.7e-11 73.9 114 43.0
arahy.Tifrunner.gnm1.ann1.6E4I8R Arachis hypogaea HOM05D002557 ORTHO05D002563 1.7e-11 73.9 90 46.7
arahy.Tifrunner.gnm1.ann1.E7JC2E Arachis hypogaea HOM05D002557 ORTHO05D002563 1.7e-11 73.9 90 46.7
DCAR_002634 Daucus carota HOM05D002557 ORTHO05D002563 1.7e-11 73.9 85 49.4
Thhalv10007578m.g Eutrema salsugineum HOM05D002557 ORTHO05D002563 2.2e-11 73.6 97 46.4
PSO541G3010 Papaver somniferum HOM05D002557 ORTHO05D002563 2.2e-11 73.6 85 47.1
PSO541G3561 Papaver somniferum HOM05D002557 ORTHO05D002563 2.2e-11 73.6 85 47.1
unitig_22.g6352 Utricularia gibba HOM05D002557 ORTHO05D002563 2.8e-11 73.2 162 35.8
CARHR015070 Cardamine hirsuta HOM05D002557 ORTHO05D002563 3.7e-11 72.8 93 46.2
PSO541G6440 Papaver somniferum HOM05D002557 ORTHO05D002563 3.7e-11 72.8 85 45.9
Sp1g12920 Schrenkiella parvula HOM05D002557 ORTHO05D002563 3.7e-11 72.8 94 47.9
AT1G14570 Arabidopsis thaliana HOM05D002557 ORTHO05D002563 4.8e-11 72.4 114 43.9
HanXRQChr12g0365861 Helianthus annuus HOM05D002557 ORTHO05D002563 1.1e-10 71.2 87 51.7
PSO063G7414 Papaver somniferum HOM05D002557 ORTHO05D002563 3.1e-10 69.7 106 41.5
Migut.E00586 Erythranthe guttata HOM05D002557 ORTHO05D002563 4.1e-10 69.3 87 47.1
Sabra08G0108100 Salix brachista HOM05D002557 ORTHO05D002563 4.1e-10 69.3 93 41.9
CDE04G3285 Ceratophyllum demersum HOM05D002557 ORTHO05D006651 5.3e-10 68.9 90 45.6
Aa31LG1G500 Aethionema arabicum HOM05D002557 ORTHO05D002563 7.0e-10 68.6 114 38.6
QL05p030518 Quercus lobata HOM05D002557 ORTHO05D002563 7.0e-10 68.6 131 42.0
SalBow2G0664 Salvia bowleyana HOM05D002557 ORTHO05D002563 9.1e-10 68.2 69 56.5
TPR.G19836 Trifolium pratense HOM05D002557 ORTHO05D002563 9.1e-10 68.2 87 44.8
Migut.E00622 Erythranthe guttata HOM05D002557 ORTHO05D002563 1.2e-09 67.8 87 47.1
PSO675G5774 Papaver somniferum HOM05D002557 ORTHO05D002563 1.2e-09 67.8 83 44.6
Nitab4.5_0011802g0020 Nicotiana tabacum HOM05D026401 ORTHO05D002563 1.6e-09 67.4 134 38.8
BcaB02g06515 Brassica carinata HOM05D002557 ORTHO05D002563 2.0e-09 67.0 103 42.7
BcaB03g13093 Brassica carinata HOM05D002557 ORTHO05D002563 2.0e-09 67.0 113 40.7
MSTRG.13658 Avicennia marina HOM05D002557 ORTHO05D002563 2.7e-09 66.6 82 43.9
PSO541G0534 Papaver somniferum HOM05D002557 ORTHO05D002563 3.5e-09 66.2 78 44.9
Zm00001eb066780 Zea mays HOM05D002557 ORTHO05D002563 3.5e-09 66.2 84 42.9
Nitab4.5_0010205g0040 Nicotiana tabacum HOM05D002557 ORTHO05D002563 5.9e-09 65.5 74 45.9
Zm00001eb433390 Zea mays HOM05D002557 ORTHO05D002563 5.9e-09 65.5 82 42.7
Peaxi162Scf00329g00945 Petunia axillaris HOM05D002557 ORTHO05D002563 1.0e-08 64.7 78 44.9
A06p10610 Brassica napus HOM05D002557 ORTHO05D002563 1.3e-08 64.3 103 39.8
BraA06t24241Z Brassica rapa HOM05D002557 ORTHO05D002563 1.3e-08 64.3 103 39.8
FAN07G1375 Fragaria x ananassa HOM05D002557 ORTHO05D002563 1.7e-08 63.9 69 46.4
BcaC05g25366 Brassica carinata HOM05D002557 ORTHO05D002563 2.2e-08 63.5 103 39.8
BolC5t29995H Brassica oleracea HOM05D002557 ORTHO05D002563 2.2e-08 63.5 103 39.8
PSO675G3997 Papaver somniferum HOM05D002557 ORTHO05D002563 2.2e-08 63.5 203 28.1
SalBow2G2563 Salvia bowleyana HOM05D002557 ORTHO05D002563 2.2e-08 63.5 110 39.1
MBI08_g40000_MAGBIO Magnolia biondii HOM05D002557 ORTHO05D002563 2.9e-08 63.2 75 45.3
BraA08t35114Z Brassica rapa HOM05D002557 ORTHO05D002563 3.8e-08 62.8 73 49.3
C05p12480 Brassica napus HOM05D002557 ORTHO05D002563 6.5e-08 62.0 103 39.8
BcaC07g38745 Brassica carinata HOM05D002557 ORTHO05D002563 1.1e-07 61.2 85 45.9
A08p31920 Brassica napus HOM05D002557 ORTHO05D002563 1.9e-07 60.5 83 43.4
CDE02G1991 Ceratophyllum demersum HOM05D002557 ORTHO05D002563 2.5e-07 60.1 82 42.7
Peaxi162Scf00074g01126 Petunia axillaris HOM05D001991 ORTHO05D002030 2.5e-07 60.1 64 48.4
SEGI_05189 Sequoiadendron giganteum HOM05D002557 ORTHO05D002563 2.5e-07 60.1 96 37.5
Aa31LG2G7850 Aethionema arabicum HOM05D002557 ORTHO05D002563 3.2e-07 59.7 90 36.7
HPP92_028142 Vanilla planifolia HOM05D002557 ORTHO05D002563 4.2e-07 59.3 93 44.1
Peaxi162Scf00074g10113 Petunia axillaris HOM05D002557 ORTHO05D002563 5.5e-07 58.9 80 45.0
TWI59G0816 Tripterygium wilfordii HOM05D002557 ORTHO05D002563 7.2e-07 58.5 101 38.6
Nitab4.5_0000223g0280 Nicotiana tabacum HOM05D002557 ORTHO05D002563 1.2e-06 57.8 64 46.9
PSO675G3239 Papaver somniferum HOM05D002557 ORTHO05D002563 2.7e-06 56.6 88 37.5
Nn3g18401 Nelumbo nucifera HOM05D002557 ORTHO05D002563 6.1e-06 55.5 47 55.3
PSO541G3681 Papaver somniferum HOM05D002557 ORTHO05D002563 8.0e-06 55.1 88 36.4


User provided reference genes

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