Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p030118 Quercus lobata HOM05D005464 ORTHO05D006803 7.4e-65 250.4 124 100.0
QL05p029759 Quercus lobata HOM05D005464 ORTHO05D006803 2.1e-64 248.8 124 99.2
Haze_16562 Corylus avellana HOM05D005464 ORTHO05D006803 9.7e-33 143.7 145 58.6
Cfa001959 Carpinus fangiana HOM05D005464 ORTHO05D006803 2.4e-31 139.0 147 57.1
CiPaw.02G157400 Carya illinoinensis HOM05D005464 ORTHO05D006803 5.0e-29 131.3 141 58.2
Manes.11G057000 Manihot esculenta HOM05D005464 ORTHO05D006803 4.0e-26 121.7 131 55.7
PGR031G2541 Punica granatum HOM05D005464 ORTHO05D006803 5.2e-26 121.3 127 55.1
Prupe.3G087600 Prunus persica HOM05D005464 ORTHO05D006803 1.5e-25 119.8 145 53.1
FAN09G2673 Fragaria x ananassa HOM05D005464 ORTHO05D006803 2.6e-25 119.0 147 50.3
FvH4_6g29660 Fragaria vesca HOM05D005464 ORTHO05D006803 3.3e-25 118.6 145 51.0
TWI12G0099 Tripterygium wilfordii HOM05D005464 ORTHO05D006803 3.3e-25 118.6 146 48.6
TAR383G0924 Trochodendron aralioides HOM05D005464 ORTHO05D006803 5.7e-25 117.9 129 53.5
RcHm_v2.0_Chr2g0135251 Rosa chinensis HOM05D005464 ORTHO05D006803 1.7e-24 116.3 147 49.7
Lsat_1_v5_gn_4_89921 Lactuca sativa HOM05D005464 ORTHO05D006803 2.8e-24 115.5 126 51.6
MD17G1212300 Malus domestica HOM05D005464 ORTHO05D006803 2.8e-24 115.5 152 50.7
Ciclev10026304m.g Citrus clementina HOM05D005464 ORTHO05D006803 4.8e-24 114.8 145 52.4
Nn8g39510 Nelumbo nucifera HOM05D005464 ORTHO05D006803 8.2e-24 114.0 113 55.8
EL10Ac9g21898 Beta vulgaris HOM05D005464 ORTHO05D006803 1.4e-23 113.2 125 50.4
FAN05G5161 Fragaria x ananassa HOM05D005464 ORTHO05D006803 1.4e-23 113.2 147 49.0
FAN14G5059 Fragaria x ananassa HOM05D005464 ORTHO05D006803 1.8e-23 112.8 142 49.3
CSS0011845 Camellia sinensis var. sinensis HOM05D005464 ORTHO05D006803 3.1e-23 112.1 131 52.7
CSS0036664 Camellia sinensis var. sinensis HOM05D005464 ORTHO05D006803 9.1e-23 110.5 131 51.9
Migut.I00762 Erythranthe guttata HOM05D005464 ORTHO05D006803 1.2e-22 110.2 139 48.2
GSVIVG01017342001 Vitis vinifera HOM05D005464 ORTHO05D006803 1.6e-22 109.8 121 53.7
Lj3g0027830 Lotus japonicus HOM05D005464 ORTHO05D006803 2.7e-22 109.0 142 48.6
Actinidia15983 Actinidia chinensis HOM05D005464 ORTHO05D006803 3.5e-22 108.6 124 50.8
Atru.chr1.2934 Acer truncatum HOM05D005464 ORTHO05D006803 4.5e-22 108.2 128 50.0
MSTRG.22747 Avicennia marina HOM05D005464 ORTHO05D006803 1.0e-21 107.1 132 51.5
Eucgr.J03066 Eucalyptus grandis HOM05D005464 ORTHO05D006803 1.3e-21 106.7 122 52.5
HanXRQChr16g0500301 Helianthus annuus HOM05D005464 ORTHO05D006803 1.3e-21 106.7 119 49.6
Nitab4.5_0006769g0010 Nicotiana tabacum HOM05D005464 ORTHO05D006803 1.3e-21 106.7 135 48.1
Cpa.g.sc10.270 Carica papaya HOM05D005464 ORTHO05D006803 2.2e-21 105.9 123 53.7
Ca_01055_v3 Cicer arietinum L. HOM05D005464 ORTHO05D006803 2.2e-21 105.9 126 49.2
ECA232G3027 Erigeron canadensis HOM05D005464 ORTHO05D006803 2.2e-21 105.9 136 46.3
Glyma.15G007300 Glycine max HOM05D005464 ORTHO05D006803 2.2e-21 105.9 134 49.3
Solyc06g068160.3 Solanum lycopersicum HOM05D005464 ORTHO05D006803 2.2e-21 105.9 138 47.8
vmacro16896 Vaccinium macrocarpon HOM05D005464 ORTHO05D006803 2.2e-21 105.9 133 50.4
Nitab4.5_0000373g0080 Nicotiana tabacum HOM05D005464 ORTHO05D006803 2.9e-21 105.5 135 48.1
TPR.G37199 Trifolium pratense HOM05D005464 ORTHO05D006803 2.9e-21 105.5 131 48.9
CANSAT56G0380 Cannabis sativa HOM05D005464 ORTHO05D006803 3.8e-21 105.1 156 48.1
Sed0012798 Sechium edule HOM05D005464 ORTHO05D006803 3.8e-21 105.1 129 49.6
Lalb_Chr14g0373811 Lupinus albus HOM05D005464 ORTHO05D006803 5.0e-21 104.8 143 46.2
Sopen06g025430 Solanum pennellii HOM05D005464 ORTHO05D006803 6.5e-21 104.4 138 47.1
Aqoxy7G02293 Aquilegia oxysepala HOM05D005464 ORTHO05D006803 8.5e-21 104.0 139 46.8
Medtr2g103910 Medicago truncatula HOM05D005464 ORTHO05D006803 8.5e-21 104.0 139 46.8
Sc06g0005900 Simmondsia chinensis HOM05D005464 ORTHO05D006803 8.5e-21 104.0 125 48.8
SGA_v2.0_scaffold5G02698 Striga asiatica HOM05D005464 ORTHO05D006803 8.5e-21 104.0 131 48.9
CAN.G1503.8 Capsicum annuum HOM05D005464 ORTHO05D006803 1.1e-20 103.6 127 46.5
ClCG07G012450 Citrullus lanatus HOM05D005464 ORTHO05D006803 1.9e-20 102.8 133 48.9
Glyma.13G365800 Glycine max HOM05D005464 ORTHO05D006803 1.9e-20 102.8 135 48.1
PGSC0003DMG400028509 Solanum tuberosum HOM05D005464 ORTHO05D006803 1.9e-20 102.8 139 48.2
MELO3C017863.2 Cucumis melo HOM05D005464 ORTHO05D006803 2.5e-20 102.4 120 51.7
Psat5g302720 Pisum sativum HOM05D005464 ORTHO05D006803 4.2e-20 101.7 126 46.8
VMungo1080G0510 Vigna mungo HOM05D005464 ORTHO05D006803 4.2e-20 101.7 122 48.4
Peaxi162Scf00207g00638 Petunia axillaris HOM05D005464 ORTHO05D006803 5.5e-20 101.3 119 48.7
CsaV3_4G001710 Cucumis sativus L. HOM05D005464 ORTHO05D006803 7.2e-20 100.9 136 47.1
MBI14_g16402_MAGBIO Magnolia biondii HOM05D005464 ORTHO05D006803 9.4e-20 100.5 119 52.1
Hund06557 Selenicereus undatus HOM05D005464 ORTHO05D006803 1.2e-19 100.1 120 49.2
PSO017G6540 Papaver somniferum HOM05D005464 ORTHO05D006803 2.1e-19 99.4 144 43.8
Rhsim12G0191100 Rhododendron simsii HOM05D005464 ORTHO05D006803 2.1e-19 99.4 123 49.6
Thecc.06G025100 Theobroma cacao HOM05D000467 ORTHO05D000379 2.1e-19 99.4 136 46.3
Lalb_Chr22g0350841 Lupinus albus HOM05D005464 ORTHO05D006803 4.7e-19 98.2 135 48.9
THA.LOC104812511 Tarenaya hassleriana HOM05D005464 ORTHO05D006803 4.7e-19 98.2 125 48.0
ATR0800G035 Amborella trichopoda HOM05D005464 ORTHO05D006803 2.3e-18 95.9 127 45.7
Carub.0001s1508 Capsella rubella HOM05D005464 ORTHO05D006803 2.3e-18 95.9 119 46.2
PSO170G0224 Papaver somniferum HOM05D005464 ORTHO05D006803 2.3e-18 95.9 146 43.2
Phvul.005G178300 Phaseolus vulgaris HOM05D005464 ORTHO05D006803 2.3e-18 95.9 139 44.6
AUR62016335 Chenopodium quinoa HOM05D005464 ORTHO05D006803 3.0e-18 95.5 119 47.9
DCAR_021346 Daucus carota HOM05D005464 ORTHO05D006803 5.2e-18 94.7 123 50.4
Eucgr.F03878 Eucalyptus grandis HOM05D005464 ORTHO05D006803 5.2e-18 94.7 133 46.6
SHI11227 Sapria himalayana HOM05D005464 ORTHO05D006803 5.2e-18 94.7 142 43.7
Zm00001eb232620 Zea mays HOM05D005464 ORTHO05D006803 8.8e-18 94.0 117 48.7
unitig_0.g1114 Utricularia gibba HOM05D005464 ORTHO05D006803 1.2e-17 93.6 131 45.0
AT1G15330 Arabidopsis thaliana HOM05D005464 ORTHO05D006803 2.0e-17 92.8 127 42.5
Dinv30606 Davidia involucrata HOM05D005464 ORTHO05D006803 2.0e-17 92.8 78 67.9
Sp1g13650 Schrenkiella parvula HOM05D005464 ORTHO05D006803 2.0e-17 92.8 129 45.0
COL.COLO4_11947 Corchorus olitorius HOM05D005464 ORTHO05D006803 2.6e-17 92.4 129 45.0
Gohir.A05G123300 Gossypium hirsutum HOM05D005464 ORTHO05D006803 3.4e-17 92.0 139 42.4
PGR102G0885 Punica granatum HOM05D005464 ORTHO05D006803 3.4e-17 92.0 124 41.1
Gorai.009G128200 Gossypium raimondii HOM05D005464 ORTHO05D006803 4.4e-17 91.7 139 42.4
HPP92_016981 Vanilla planifolia HOM05D005464 ORTHO05D006803 7.5e-17 90.9 122 45.9
AL1G27420 Arabidopsis lyrata HOM05D005464 ORTHO05D006803 2.2e-16 89.4 130 40.8
BcaC05g25470 Brassica carinata HOM05D005464 ORTHO05D006803 3.7e-16 88.6 130 43.1
Os02g0158900 Oryza sativa ssp. japonica HOM05D005464 ORTHO05D006803 4.8e-16 88.2 126 45.2
arahy.Tifrunner.gnm1.ann1.JVJR89 Arachis hypogaea HOM05D005464 ORTHO05D006803 6.3e-16 87.8 87 55.2
arahy.Tifrunner.gnm1.ann1.Y6ZEHB Arachis hypogaea HOM05D005464 ORTHO05D006803 6.3e-16 87.8 87 55.2
BolC5t30083H Brassica oleracea HOM05D005464 ORTHO05D006803 6.3e-16 87.8 130 42.3
A06p11340 Brassica napus HOM05D005464 ORTHO05D006803 8.3e-16 87.4 130 42.3
C05p13460 Brassica napus HOM05D005464 ORTHO05D006803 8.3e-16 87.4 130 42.3
BraA06t24313Z Brassica rapa HOM05D005464 ORTHO05D006803 8.3e-16 87.4 130 42.3
CARHR015860 Cardamine hirsuta HOM05D005464 ORTHO05D006803 8.3e-16 87.4 128 41.4
AT1G80090 Arabidopsis thaliana HOM05D005464 ORTHO05D006803 9.1e-15 84.0 116 45.7
Thhalv10008048m.g Eutrema salsugineum HOM05D005464 ORTHO05D006803 2.0e-14 82.8 129 40.3
Psat6g211360 Pisum sativum HOM05D005464 ORTHO05D006803 2.7e-14 82.4 90 52.2
THA.LOC104812509 Tarenaya hassleriana HOM05D005464 ORTHO05D006803 4.5e-14 81.6 117 45.3
Aa31LG7G100 Aethionema arabicum HOM05D005464 ORTHO05D006803 1.3e-13 80.1 124 41.1
Gohir.D05G124200 Gossypium hirsutum HOM05D005464 ORTHO05D006803 5.0e-13 78.2 139 39.6
AagrBONN_evm.TU.Sc2ySwM_344.2189 Anthoceros agrestis HOM05D005464 ORTHO05D006803 1.6e-11 73.2 122 38.5
AL2G41450 Arabidopsis lyrata HOM05D005464 ORTHO05D006803 1.6e-11 73.2 125 42.4
Psat1g035880 Pisum sativum HOM05D005464 ORTHO05D006803 1.6e-11 73.2 104 44.2
AUR62011516 Chenopodium quinoa HOM05D005464 ORTHO05D006803 2.7e-11 72.4 92 46.7
Thhalv10019455m.g Eutrema salsugineum HOM05D005464 ORTHO05D006803 2.7e-11 72.4 120 44.2
SMO201G0050 Selaginella moellendorffii HOM05D005464 ORTHO05D006803 3.6e-11 72.0 112 41.1
BcaB02g08721 Brassica carinata HOM05D005464 ORTHO05D006803 1.0e-10 70.5 133 37.6
BcaC08g47570 Brassica carinata HOM05D005464 ORTHO05D006803 1.8e-10 69.7 139 40.3
BolC6t40438H Brassica oleracea HOM05D005464 ORTHO05D006803 1.8e-10 69.7 139 40.3
AagrBONN_evm.TU.Sc2ySwM_368.1642 Anthoceros agrestis HOM05D005464 ORTHO05D006803 2.3e-10 69.3 114 36.0
Mapoly0007s0086 Marchantia polymorpha HOM05D005464 ORTHO05D006803 3.0e-10 68.9 108 39.8
C06p54250 Brassica napus HOM05D005464 ORTHO05D006803 4.0e-10 68.6 141 39.0
BraA07t32046Z Brassica rapa HOM05D005464 ORTHO05D006803 6.8e-10 67.8 139 38.1
A07p45420 Brassica napus HOM05D005464 ORTHO05D006803 1.5e-09 66.6 141 36.9
Pp3c3_23830 Physcomitrium patens HOM05D005464 ORTHO05D006803 2.4e-07 59.3 113 34.5
CBR_g24374 Chara braunii HOM05D005464 ORTHO05D006803 7.7e-06 54.3 118 28.8


User provided reference genes

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