Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p029818 Quercus lobata HOM05D006424 ORTHO05D007945 1.2e-163 579.7 283 100.0
Cfa001961 Carpinus fangiana HOM05D006424 ORTHO05D007945 2.3e-130 469.2 282 79.8
Haze_16559 Corylus avellana HOM05D006424 ORTHO05D007945 2.0e-126 456.1 304 73.4
CiPaw.01G248200 Carya illinoinensis HOM05D006424 ORTHO05D007945 4.5e-126 454.9 278 78.1
GSVIVG01017340001 Vitis vinifera HOM05D006424 ORTHO05D007945 2.7e-123 445.7 282 76.2
COL.COLO4_11949 Corchorus olitorius HOM05D006424 ORTHO05D007945 2.3e-122 442.6 283 76.7
CANSAT56G3050 Cannabis sativa HOM05D006424 ORTHO05D007945 8.8e-122 440.7 282 74.1
CiPaw.02G157300 Carya illinoinensis HOM05D006424 ORTHO05D007945 1.3e-120 436.8 278 77.3
Actinidia08796 Actinidia chinensis HOM05D006424 ORTHO05D007945 2.2e-120 436.0 283 73.5
Actinidia15982 Actinidia chinensis HOM05D006424 ORTHO05D007945 8.2e-120 434.1 283 72.8
Hma1.2p1_0042F.1_g025600 Hydrangea macrophylla HOM05D006424 ORTHO05D007945 3.1e-119 432.2 281 73.3
Atru.chr1.2950 Acer truncatum HOM05D006424 ORTHO05D007945 6.9e-119 431.0 277 74.0
Prupe.3G087300 Prunus persica HOM05D006424 ORTHO05D007945 9.1e-119 430.6 283 73.9
CSS0015595 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 1.5e-118 429.9 285 73.3
Eucgr.F03876 Eucalyptus grandis HOM05D006424 ORTHO05D007945 3.4e-118 428.7 282 73.4
Cpa.g.sc10.267 Carica papaya HOM05D006424 ORTHO05D007945 1.7e-117 426.4 282 72.0
Duzib192G0907 Durio zibethinus HOM05D006424 ORTHO05D007945 2.2e-117 426.0 280 73.6
Manes.11G056800 Manihot esculenta HOM05D006424 ORTHO05D007945 6.5e-117 424.5 277 72.9
Ciclev10026222m.g Citrus clementina HOM05D006424 ORTHO05D007945 5.5e-116 421.4 282 70.2
Manes.04G112700 Manihot esculenta HOM05D006424 ORTHO05D007945 5.5e-116 421.4 283 70.7
ClCG09G002940 Citrullus lanatus HOM05D006424 ORTHO05D007945 7.2e-116 421.0 283 72.4
Thecc.06G024200 Theobroma cacao HOM05D006424 ORTHO05D007945 7.2e-116 421.0 280 72.1
TAR383G1051 Trochodendron aralioides HOM05D006424 ORTHO05D007945 7.2e-116 421.0 282 71.6
Gohir.D06G192200 Gossypium hirsutum HOM05D006424 ORTHO05D007945 1.2e-115 420.2 280 72.5
MELO3C023426.2 Cucumis melo HOM05D006424 ORTHO05D007945 2.7e-115 419.1 282 71.3
Gorai.010G225400 Gossypium raimondii HOM05D006424 ORTHO05D007945 3.6e-115 418.7 249 77.1
Lalb_Chr04g0262371 Lupinus albus HOM05D006424 ORTHO05D007945 4.7e-115 418.3 246 77.2
RcHm_v2.0_Chr2g0135411 Rosa chinensis HOM05D006424 ORTHO05D007945 8.0e-115 417.5 283 72.1
Gohir.A06G185600 Gossypium hirsutum HOM05D006424 ORTHO05D007945 1.4e-114 416.8 280 72.1
Rhsim12G0191200 Rhododendron simsii HOM05D006424 ORTHO05D007945 2.3e-114 416.0 283 71.7
FAN02G1519 Fragaria x ananassa HOM05D006424 ORTHO05D007945 3.9e-114 415.2 289 70.2
Sed0012965 Sechium edule HOM05D006424 ORTHO05D007945 5.2e-114 414.8 286 71.3
Nitab4.5_0009497g0010 Nicotiana tabacum HOM05D006424 ORTHO05D007945 6.7e-114 414.5 273 70.0
VMungo0331G1912 Vigna mungo HOM05D006424 ORTHO05D007945 6.7e-114 414.5 283 71.7
Medtr4g010140 Medicago truncatula HOM05D006424 ORTHO05D007945 8.8e-114 414.1 282 69.5
CsaV3_7G032330 Cucumis sativus L. HOM05D006424 ORTHO05D007945 1.5e-113 413.3 283 70.7
FAN05G3690 Fragaria x ananassa HOM05D006424 ORTHO05D007945 1.5e-113 413.3 283 71.0
MD17G1212100 Malus domestica HOM05D006424 ORTHO05D007945 4.4e-113 411.8 278 70.1
Phvul.010G156300 Phaseolus vulgaris HOM05D006424 ORTHO05D007945 1.3e-112 410.2 283 69.6
Potri.001G204300 Populus trichocarpa HOM05D006424 ORTHO05D007945 1.3e-112 410.2 285 70.9
PGSC0003DMG402028626 Solanum tuberosum HOM05D006424 ORTHO05D007945 1.7e-112 409.8 273 68.9
Glyma.08G213000 Glycine max HOM05D006424 ORTHO05D007945 2.2e-112 409.5 282 71.6
Lj3g0018478 Lotus japonicus HOM05D006424 ORTHO05D007945 2.2e-112 409.5 282 68.8
Ca_20445_v3 Cicer arietinum L. HOM05D006424 ORTHO05D007945 8.2e-112 407.5 283 68.6
PGR102G1391 Punica granatum HOM05D006424 ORTHO05D007945 1.1e-111 407.1 283 69.3
Lj9A500T81 Lonicera japonica HOM05D006424 ORTHO05D007945 1.8e-111 406.4 245 74.7
Cc04_g04390 Coffea canephora HOM05D006424 ORTHO05D007945 3.1e-111 405.6 256 71.5
Solyc12g042770.3 Solanum lycopersicum HOM05D006424 ORTHO05D007945 3.1e-111 405.6 273 68.1
Sopen12g021950 Solanum pennellii HOM05D006424 ORTHO05D007945 4.1e-111 405.2 273 68.5
TWI12G0141 Tripterygium wilfordii HOM05D006424 ORTHO05D007945 4.1e-111 405.2 285 69.8
FAN14G0356 Fragaria x ananassa HOM05D006424 ORTHO05D007945 7.0e-111 404.4 277 70.8
Peaxi162Scf00034g01413 Petunia axillaris HOM05D006424 ORTHO05D007945 1.3e-109 400.2 269 69.5
Nn2g12084 Nelumbo nucifera HOM05D006424 ORTHO05D007945 1.7e-109 399.8 282 67.7
Oeu039429.1 Olea europaea HOM05D006424 ORTHO05D007945 2.2e-109 399.4 239 77.0
Glyma.07G029900 Glycine max HOM05D006424 ORTHO05D007945 5.0e-109 398.3 280 68.6
HanXRQChr04g0097881 Helianthus annuus HOM05D006424 ORTHO05D007945 5.0e-109 398.3 283 67.8
CSS0035863 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 8.5e-109 397.5 295 67.5
Sabra01G0157400 Salix brachista HOM05D006424 ORTHO05D007945 8.0e-107 391.0 280 68.2
MSTRG.22746 Avicennia marina HOM05D006424 ORTHO05D007945 1.0e-106 390.6 275 66.5
ECA247G2617 Erigeron canadensis HOM05D006424 ORTHO05D007945 4.0e-106 388.7 284 65.5
TPR.G38617 Trifolium pratense HOM05D001630 ORTHO05D007945 1.2e-105 387.1 279 65.6
Aa31LG8G3030 Aethionema arabicum HOM05D006424 ORTHO05D007945 1.5e-105 386.7 239 74.1
THA.LOC104810510 Tarenaya hassleriana HOM05D006424 ORTHO05D007945 1.5e-105 386.7 282 65.6
Sp3g14150 Schrenkiella parvula HOM05D006424 ORTHO05D007945 4.4e-105 385.2 249 70.7
A03p39490 Brassica napus HOM05D006424 ORTHO05D007945 5.7e-105 384.8 263 68.1
CARHR090930 Cardamine hirsuta HOM05D006424 ORTHO05D007945 5.7e-105 384.8 252 69.8
AUR62016338 Chenopodium quinoa HOM05D006424 ORTHO05D007945 1.3e-104 383.6 278 66.2
MBI04_g29330_MAGBIO Magnolia biondii HOM05D006424 ORTHO05D007945 1.3e-104 383.6 284 65.5
BolC5t33801H Brassica oleracea HOM05D006424 ORTHO05D007945 1.7e-104 383.3 240 71.7
ATR0322G065 Amborella trichopoda HOM05D006424 ORTHO05D007945 2.2e-104 382.9 254 68.9
BcaC05g28929 Brassica carinata HOM05D006424 ORTHO05D007945 3.7e-104 382.1 261 68.6
C05p50560 Brassica napus HOM05D006424 ORTHO05D007945 3.7e-104 382.1 261 68.6
Thhalv10022443m.g Eutrema salsugineum HOM05D006424 ORTHO05D007945 3.7e-104 382.1 248 71.0
Nn8g39504 Nelumbo nucifera HOM05D006424 ORTHO05D007945 3.7e-104 382.1 282 66.0
A05p33570 Brassica napus HOM05D006424 ORTHO05D007945 6.3e-104 381.3 271 66.8
C03p47890 Brassica napus HOM05D006424 ORTHO05D007945 1.1e-103 380.6 237 73.0
AL3G28500 Arabidopsis lyrata HOM05D006424 ORTHO05D007945 2.4e-103 379.4 249 70.7
Nitab4.5_0003157g0020 Nicotiana tabacum HOM05D006424 ORTHO05D007945 4.1e-103 378.6 282 65.2
AT3G15840 Arabidopsis thaliana HOM05D006424 ORTHO05D007945 5.3e-103 378.3 249 70.7
BcaB06g25691 Brassica carinata HOM05D006424 ORTHO05D007945 5.3e-103 378.3 271 66.4
BraA03t13099Z Brassica rapa HOM05D006424 ORTHO05D007945 7.0e-103 377.9 263 67.3
Migut.I00764 Erythranthe guttata HOM05D006424 ORTHO05D007945 9.1e-103 377.5 264 66.7
BraA05t22180Z Brassica rapa HOM05D006424 ORTHO05D007945 1.6e-102 376.7 240 71.2
Carub.0003s1558 Capsella rubella HOM05D006424 ORTHO05D007945 2.0e-102 376.3 240 70.8
AUR62011520 Chenopodium quinoa HOM05D006424 ORTHO05D007945 3.5e-102 375.6 287 65.2
Aqoxy7G03662 Aquilegia oxysepala HOM05D006424 ORTHO05D007945 5.9e-102 374.8 282 64.2
PSO210G3245 Papaver somniferum HOM05D006424 ORTHO05D007945 5.9e-102 374.8 284 65.1
arahy.Tifrunner.gnm1.ann1.92ZGJC Arachis hypogaea HOM05D006424 ORTHO05D007945 1.7e-101 373.2 283 65.0
PSO210G5365 Papaver somniferum HOM05D006424 ORTHO05D007945 2.2e-101 372.9 284 64.4
BcaC01g03854 Brassica carinata HOM05D006424 ORTHO05D007945 1.1e-100 370.5 237 71.7
BolC3t17067H Brassica oleracea HOM05D006424 ORTHO05D007945 1.1e-100 370.5 259 66.4
Lsat_1_v5_gn_1_34401 Lactuca sativa HOM05D006424 ORTHO05D007945 1.1e-100 370.5 311 58.5
FAN09G3401 Fragaria x ananassa HOM05D006424 ORTHO05D007945 5.5e-100 368.2 264 68.2
unitig_27.g24949 Utricularia gibba HOM05D006424 ORTHO05D007945 7.2e-100 367.9 269 63.9
vmacro16897 Vaccinium macrocarpon HOM05D006424 ORTHO05D007945 7.2e-100 367.9 253 69.2
DCAR_021344 Daucus carota HOM05D006424 ORTHO05D007945 1.6e-99 366.7 286 62.9
CDE07G1654 Ceratophyllum demersum HOM05D006424 ORTHO05D007945 1.5e-97 360.1 282 63.1
Ah.01g020600 Amaranthus hybridus HOM05D006424 ORTHO05D007945 3.4e-97 359.0 215 74.9
FvH4_6g29710 Fragaria vesca HOM05D006424 ORTHO05D007945 7.5e-97 357.8 197 80.2
CAN.G47.13 Capsicum annuum HOM05D006424 ORTHO05D007945 1.7e-96 356.7 205 76.1
Os03g0586500 Oryza sativa ssp. japonica HOM05D006424 ORTHO05D007945 7.0e-87 324.7 215 66.5
SalBow2G1302 Salvia bowleyana HOM05D006424 ORTHO05D007945 1.2e-83 313.9 277 56.7
Zm00001eb049190 Zea mays HOM05D006424 ORTHO05D007945 1.6e-83 313.5 209 66.0
Zm00001eb219530 Zea mays HOM05D006424 ORTHO05D007945 2.3e-82 309.7 231 62.3
Thecc.06G024600 Theobroma cacao HOM05D006424 ORTHO05D007945 5.8e-81 305.1 206 70.9
Dinv38123 Davidia involucrata HOM05D006424 ORTHO05D007945 1.2e-78 297.4 209 67.9
Mapoly0024s0088 Marchantia polymorpha HOM05D006424 ORTHO05D007945 7.8e-78 294.7 240 55.4
Sed0007474 Sechium edule HOM05D006424 ORTHO05D007945 7.3e-76 288.1 208 67.3
AagrBONN_evm.TU.Sc2ySwM_344.5484 Anthoceros agrestis HOM05D006424 ORTHO05D007945 1.3e-72 277.3 254 52.4
QL05p029868 Quercus lobata HOM05D006424 ORTHO05D007945 4.1e-71 272.3 151 92.1
Pp3c9_11540 Physcomitrium patens HOM05D006424 ORTHO05D007945 1.6e-70 270.4 228 52.6
Pp3c22_2660 Physcomitrium patens HOM05D006424 ORTHO05D007945 2.1e-70 270.0 278 46.4
CBR_g38381 Chara braunii HOM05D006424 ORTHO05D007945 1.7e-69 266.9 233 54.1
SMO331G0083 Selaginella moellendorffii HOM05D006424 ORTHO05D007945 1.8e-66 256.9 201 55.7
Thecc.K0004600 Theobroma cacao HOM05D006424 ORTHO05D007945 3.1e-66 256.1 144 79.9
Hund06560 Selenicereus undatus HOM05D006424 ORTHO05D007945 2.5e-60 236.5 238 51.3
arahy.Tifrunner.gnm1.ann1.7R86JN Arachis hypogaea HOM05D006424 ORTHO05D007945 5.8e-57 225.3 282 45.7
SEGI_16074 Sequoiadendron giganteum HOM05D006424 ORTHO05D007945 1.9e-55 220.3 173 57.2
Pp3c15_11500 Physcomitrium patens HOM05D006424 ORTHO05D007945 4.1e-55 219.2 238 45.8
Psat7g257120 Pisum sativum HOM05D006424 ORTHO05D007945 2.7e-54 216.5 175 60.0
EL10Ac9g21901 Beta vulgaris HOM05D006424 ORTHO05D007945 3.0e-45 186.4 170 57.6
QL05p029832 Quercus lobata HOM05D006424 ORTHO05D007945 7.9e-38 161.8 114 76.3
Oeu000425.1 Olea europaea HOM05D006424 ORTHO05D007945 1.1e-26 124.8 148 46.6
arahy.Tifrunner.gnm1.ann1.ZYH6JG Arachis hypogaea HOM05D006424 ORTHO05D007945 6.5e-16 89.0 55 67.3
arahy.Tifrunner.gnm1.ann1.YP381G Arachis hypogaea HOM05D006424 ORTHO05D007945 2.1e-14 84.0 124 43.5


User provided reference genes

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