Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p029543 Quercus lobata HOM05D007722 ORTHO05D009730 2.5e-68 261.9 129 100.0
Haze_16545 Corylus avellana HOM05D007722 ORTHO05D009730 8.3e-19 97.4 117 53.0
Phvul.010G155500 Phaseolus vulgaris HOM05D007722 ORTHO05D009730 1.4e-18 96.7 93 58.1
Cfa001975 Carpinus fangiana HOM05D007722 ORTHO05D009730 1.2e-17 93.6 120 52.5
Lj3g0002989 Lotus japonicus HOM05D007722 ORTHO05D009730 7.8e-17 90.9 45 93.3
Glyma.08G212200 Glycine max HOM05D007722 ORTHO05D009730 2.3e-16 89.4 49 81.6
Medtr4g010270 Medicago truncatula HOM05D007722 ORTHO05D009730 2.3e-16 89.4 46 84.8
Psat7g256360 Pisum sativum HOM05D007722 ORTHO05D009730 2.3e-16 89.4 111 50.5
Lalb_Chr25g0279351 Lupinus albus HOM05D007722 ORTHO05D009730 6.6e-16 87.8 112 50.9
VMungo0331G1522 Vigna mungo HOM05D007722 ORTHO05D009730 6.6e-16 87.8 81 59.3
FAN09G0448 Fragaria x ananassa HOM05D007722 ORTHO05D009730 8.6e-16 87.4 47 83.0
Duzib160G0092 Durio zibethinus HOM05D007722 ORTHO05D009730 1.1e-15 87.0 95 52.6
Prupe.3G085400 Prunus persica HOM05D007722 ORTHO05D009730 1.1e-15 87.0 129 46.5
Glyma.07G030600 Glycine max HOM05D007722 ORTHO05D009730 4.3e-15 85.1 45 82.2
ClCG09G002890 Citrullus lanatus HOM05D007722 ORTHO05D009730 9.5e-15 84.0 47 83.0
CANSAT56G0372 Cannabis sativa HOM05D007722 ORTHO05D009730 2.1e-14 82.8 112 50.0
FvH4_6g29860 Fragaria vesca HOM05D007722 ORTHO05D009730 2.1e-14 82.8 106 48.1
FAN14G1239 Fragaria x ananassa HOM05D007722 ORTHO05D009730 2.1e-14 82.8 106 48.1
Rhsim08G0213600 Rhododendron simsii HOM05D007722 ORTHO05D009730 4.7e-14 81.6 117 45.3
GSVIVG01017323001 Vitis vinifera HOM05D007722 ORTHO05D009730 8.0e-14 80.9 49 75.5
MD17G1210100 Malus domestica HOM05D007722 ORTHO05D009730 1.4e-13 80.1 126 48.4
MBI01_g35411_MAGBIO Magnolia biondii HOM05D007722 ORTHO05D009730 2.3e-13 79.3 119 48.7
TAR636G1020 Trochodendron aralioides HOM05D007722 ORTHO05D009730 2.3e-13 79.3 49 77.6
Potri.001G192500 Populus trichocarpa HOM05D007722 ORTHO05D009730 3.1e-13 79.0 136 41.9
Nn2g12058 Nelumbo nucifera HOM05D007722 ORTHO05D009730 4.0e-13 78.6 49 73.5
Sed0026756 Sechium edule HOM05D007722 ORTHO05D009730 5.2e-13 78.2 79 55.7
COL.COLO4_12955 Corchorus olitorius HOM05D007722 ORTHO05D009730 6.8e-13 77.8 108 45.4
Eucgr.F03868 Eucalyptus grandis HOM05D007722 ORTHO05D009730 6.8e-13 77.8 45 80.0
Eucgr.L02714 Eucalyptus grandis HOM05D007722 ORTHO05D009730 6.8e-13 77.8 45 80.0
Thecc.06G022100 Theobroma cacao HOM05D007722 ORTHO05D009730 6.8e-13 77.8 48 77.1
DCAR_025509 Daucus carota HOM05D007722 ORTHO05D009730 1.2e-12 77.0 46 67.4
Gohir.D10G075700 Gossypium hirsutum HOM05D007722 ORTHO05D009730 1.2e-12 77.0 114 46.5
Lalb_Chr04g0262381 Lupinus albus HOM05D007722 ORTHO05D009730 1.2e-12 77.0 116 48.3
Dinv30597 Davidia involucrata HOM05D007722 ORTHO05D009730 1.5e-12 76.6 48 75.0
Gorai.011G083600 Gossypium raimondii HOM05D007722 ORTHO05D009730 2.6e-12 75.9 114 45.6
CiPaw.01G246700 Carya illinoinensis HOM05D007722 ORTHO05D009730 5.8e-12 74.7 41 80.5
Gohir.A10G073900 Gossypium hirsutum HOM05D007722 ORTHO05D009730 5.8e-12 74.7 114 45.6
PGR102G2260 Punica granatum HOM05D007722 ORTHO05D009730 1.3e-11 73.6 47 74.5
CSS0036618 Camellia sinensis var. sinensis HOM05D007722 ORTHO05D009730 1.7e-11 73.2 111 45.0
Migut.D01071 Erythranthe guttata HOM05D007722 ORTHO05D009730 1.7e-11 73.2 49 67.3
Gohir.A05G126200 Gossypium hirsutum HOM05D007722 ORTHO05D009730 1.7e-11 73.2 46 73.9
Gohir.D05G127100 Gossypium hirsutum HOM05D007722 ORTHO05D009730 1.7e-11 73.2 46 73.9
Gorai.009G131200 Gossypium raimondii HOM05D007722 ORTHO05D009730 1.7e-11 73.2 46 73.9
Nitab4.5_0007793g0010 Nicotiana tabacum HOM05D007722 ORTHO05D009730 1.7e-11 73.2 48 70.8
Manes.04G113466 Manihot esculenta HOM05D007722 ORTHO05D009730 2.2e-11 72.8 105 43.8
Oeu045155.1 Olea europaea HOM05D007722 ORTHO05D009730 2.2e-11 72.8 78 50.0
Nitab4.5_0011590g0030 Nicotiana tabacum HOM05D007722 ORTHO05D009730 2.9e-11 72.4 47 72.3
PGSC0003DMG401000617 Solanum tuberosum HOM05D007722 ORTHO05D009730 3.7e-11 72.0 48 68.8
Solyc03g116660.3 Solanum lycopersicum HOM05D007722 ORTHO05D009730 4.9e-11 71.6 48 68.8
Sopen03g035570 Solanum pennellii HOM05D007722 ORTHO05D009730 4.9e-11 71.6 48 68.8
unitig_0.g1117 Utricularia gibba HOM05D007722 ORTHO05D009730 6.4e-11 71.2 51 62.7
CDE06G0954 Ceratophyllum demersum HOM05D007722 ORTHO05D009730 1.4e-10 70.1 48 75.0
Aqoxy7G03685 Aquilegia oxysepala HOM05D007722 ORTHO05D009730 2.4e-10 69.3 52 63.5
Sabra01G0149600 Salix brachista HOM05D007722 ORTHO05D009730 5.4e-10 68.2 36 80.6
SGA_v2.0_scaffold37G14773 Striga asiatica HOM05D007722 ORTHO05D009730 7.0e-10 67.8 49 61.2
HanXRQChr16g0500401 Helianthus annuus HOM05D007722 ORTHO05D009730 9.2e-10 67.4 47 66.0
Sc10g0005890 Simmondsia chinensis HOM05D007722 ORTHO05D009730 1.2e-09 67.0 49 63.3
Manes.11G056000 Manihot esculenta HOM05D007722 ORTHO05D009730 2.0e-09 66.2 132 40.2
Peaxi162Scf00332g00773 Petunia axillaris HOM05D007722 ORTHO05D009730 3.5e-09 65.5 127 36.2
CDE07G1717 Ceratophyllum demersum HOM05D007722 ORTHO05D009730 1.7e-08 63.2 48 66.7
EL10Ac9g21908 Beta vulgaris HOM05D007722 ORTHO05D009730 3.0e-08 62.4 78 46.2
HPP92_000666 Vanilla planifolia HOM05D007722 ORTHO05D009730 3.9e-08 62.0 80 41.2
Carub.0001s4151 Capsella rubella HOM05D007722 ORTHO05D009730 8.6e-08 60.8 50 64.0
ECA232G4504 Erigeron canadensis HOM05D000985 ORTHO05D000866 8.6e-08 60.8 47 57.4
Sp3g14100 Schrenkiella parvula HOM05D007722 ORTHO05D009730 8.6e-08 60.8 47 59.6
Thhalv10021781m.g Eutrema salsugineum HOM05D007722 ORTHO05D009730 1.1e-07 60.5 47 59.6
BcaB04g20904 Brassica carinata HOM05D007722 ORTHO05D009730 1.5e-07 60.1 46 56.5
AL1G60800 Arabidopsis lyrata HOM05D007722 ORTHO05D009730 1.9e-07 59.7 117 41.0
BcaC09g48556 Brassica carinata HOM05D007722 ORTHO05D009730 1.9e-07 59.7 46 56.5
A01p38330 Brassica napus HOM05D007722 ORTHO05D009730 1.9e-07 59.7 46 56.5
BraA01t03884Z Brassica rapa HOM05D007722 ORTHO05D009730 1.9e-07 59.7 46 56.5
THA.LOC104818136 Tarenaya hassleriana HOM05D007722 ORTHO05D009730 1.9e-07 59.7 48 60.4
Carub.0003s1552 Capsella rubella HOM05D007722 ORTHO05D009730 2.5e-07 59.3 47 57.4
CARHR090870 Cardamine hirsuta HOM05D007722 ORTHO05D009730 2.5e-07 59.3 47 57.4
Os01g0392100 Oryza sativa ssp. japonica HOM05D007722 ORTHO05D009730 2.5e-07 59.3 48 56.2
THA.LOC104810506 Tarenaya hassleriana HOM05D007722 ORTHO05D009730 4.3e-07 58.5 109 39.4
Aa31LG8G2980 Aethionema arabicum HOM05D007722 ORTHO05D009730 5.6e-07 58.2 47 59.6
Zm00001eb221290 Zea mays HOM05D007722 ORTHO05D009730 5.6e-07 58.2 84 42.9
CARHR042660 Cardamine hirsuta HOM05D007722 ORTHO05D009730 2.1e-06 56.2 50 58.0
PSO210G0183 Papaver somniferum HOM05D007722 ORTHO05D009730 2.8e-06 55.8 129 36.4
AT1G52550 Arabidopsis thaliana HOM05D007722 ORTHO05D009730 4.7e-06 55.1 114 37.7
BcaC05g28932 Brassica carinata HOM05D000020 ORTHO05D000543 6.2e-06 54.7 47 51.1
C01p48660 Brassica napus HOM05D000771 ORTHO05D001963 6.2e-06 54.7 35 65.7
C05p50590 Brassica napus HOM05D000020 ORTHO05D000543 6.2e-06 54.7 47 51.1
BolC1t04820H Brassica oleracea HOM05D000771 ORTHO05D001963 6.2e-06 54.7 35 65.7
PSO210G5680 Papaver somniferum HOM05D007722 ORTHO05D009730 6.2e-06 54.7 114 41.2


User provided reference genes

Program Settings