Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p028028 Quercus lobata HOM05D000197 ORTHO05D000114 1.4e-33 145.6 69 100.0
QL05p028021 Quercus lobata HOM05D000197 ORTHO05D000114 4.7e-21 104.0 67 76.1
QL05p028199 Quercus lobata HOM05D000197 ORTHO05D000114 2.0e-19 98.6 67 71.6
QL05p028161 Quercus lobata HOM05D000197 ORTHO05D000114 1.7e-18 95.5 67 70.1
QL09p053276 Quercus lobata HOM05D000197 ORTHO05D000114 3.6e-13 77.8 67 52.2
QL05p058587 Quercus lobata HOM05D000197 ORTHO05D000114 1.1e-12 76.3 63 52.4
BolC6t39555H Brassica oleracea HOM05D000197 ORTHO05D000114 1.2e-08 62.8 65 46.2
Haze_10952 Corylus avellana HOM05D000197 ORTHO05D000114 2.1e-08 62.0 56 55.4
Potri.010G111000 Populus trichocarpa HOM05D000197 ORTHO05D000114 2.1e-08 62.0 60 50.0
Aa31LG3G6110 Aethionema arabicum HOM05D000197 ORTHO05D000114 2.7e-08 61.6 64 48.4
Haze_10955 Corylus avellana HOM05D000197 ORTHO05D000114 2.7e-08 61.6 56 55.4
MELO3C006775.2 Cucumis melo HOM05D000197 ORTHO05D000114 3.5e-08 61.2 66 47.0
Ciclev10017638m.g Citrus clementina HOM05D000197 ORTHO05D000114 6.0e-08 60.5 61 49.2
BcaC03g15243 Brassica carinata HOM05D000197 ORTHO05D000114 7.9e-08 60.1 67 43.3
Cfa014970 Carpinus fangiana HOM05D000197 ORTHO05D000114 7.9e-08 60.1 56 53.6
Haze_10959 Corylus avellana HOM05D000197 ORTHO05D000114 7.9e-08 60.1 56 55.4
C02p28320 Brassica napus HOM05D000197 ORTHO05D000114 1.0e-07 59.7 64 46.9
CARHR023520 Cardamine hirsuta HOM05D000197 ORTHO05D000114 1.0e-07 59.7 65 46.2
Aa31LG4G10180 Aethionema arabicum HOM05D000197 ORTHO05D000114 1.3e-07 59.3 59 49.2
C06p44910 Brassica napus HOM05D000197 ORTHO05D000114 1.3e-07 59.3 63 46.0
CiPaw.06G033500 Carya illinoinensis HOM05D000197 ORTHO05D000114 1.3e-07 59.3 66 50.0
CiPaw.06G046600 Carya illinoinensis HOM05D000197 ORTHO05D000114 1.3e-07 59.3 66 50.0
Manes.17G078900 Manihot esculenta HOM05D000197 ORTHO05D000114 1.3e-07 59.3 68 38.2
Manes.17G079184 Manihot esculenta HOM05D000197 ORTHO05D000114 1.3e-07 59.3 71 40.8
TWI53G1541 Tripterygium wilfordii HOM05D000197 ORTHO05D000114 1.3e-07 59.3 60 46.7
TWI53G1611 Tripterygium wilfordii HOM05D000197 ORTHO05D000114 1.8e-07 58.9 60 45.0
ClCG07G006450 Citrullus lanatus HOM05D000197 ORTHO05D000114 2.3e-07 58.5 64 46.9
CsaV3_3G015760 Cucumis sativus L. HOM05D000197 ORTHO05D000114 2.3e-07 58.5 66 47.0
CiPaw.05G194900 Carya illinoinensis HOM05D000197 ORTHO05D000114 3.0e-07 58.2 62 45.2
CsaV3_3G015770 Cucumis sativus L. HOM05D000197 ORTHO05D000114 3.0e-07 58.2 65 46.2
QL03p033671 Quercus lobata HOM05D000197 ORTHO05D000114 3.0e-07 58.2 56 53.6
Aa31LG7G7120 Aethionema arabicum HOM05D000197 ORTHO05D000114 3.9e-07 57.8 65 47.7
A02p16970 Brassica napus HOM05D000197 ORTHO05D000114 5.1e-07 57.4 66 42.4
A04p11550 Brassica napus HOM05D000197 ORTHO05D000114 5.1e-07 57.4 66 42.4
C06p35870 Brassica napus HOM05D000197 ORTHO05D000114 5.1e-07 57.4 67 40.3
BolC6t39550H Brassica oleracea HOM05D000197 ORTHO05D000114 5.1e-07 57.4 63 42.9
BraA04t16820Z Brassica rapa HOM05D000197 ORTHO05D000114 5.1e-07 57.4 66 42.4
CARHR185670 Cardamine hirsuta HOM05D000197 ORTHO05D000114 5.1e-07 57.4 62 38.7
CiPaw.05G195100 Carya illinoinensis HOM05D000197 ORTHO05D000114 5.1e-07 57.4 66 43.9
CsaV3_3G015780 Cucumis sativus L. HOM05D000197 ORTHO05D000114 5.1e-07 57.4 64 45.3
Manes.17G079300 Manihot esculenta HOM05D000197 ORTHO05D000114 5.1e-07 57.4 66 39.4
AL2G30370 Arabidopsis lyrata HOM05D000197 ORTHO05D000114 6.7e-07 57.0 67 40.3
BolC2t08875H Brassica oleracea HOM05D000197 ORTHO05D000114 6.7e-07 57.0 66 42.4
Cpa.g.sc550.1 Carica papaya HOM05D000197 ORTHO05D000114 6.7e-07 57.0 58 46.6
Haze_10951 Corylus avellana HOM05D000197 ORTHO05D000114 6.7e-07 57.0 56 50.0
Haze_10956 Corylus avellana HOM05D000197 ORTHO05D000114 6.7e-07 57.0 56 50.0
Duzib251G0626 Durio zibethinus HOM05D000197 ORTHO05D000114 6.7e-07 57.0 62 40.3
FvH4_2g07050 Fragaria vesca HOM05D000197 ORTHO05D000114 6.7e-07 57.0 60 43.3
FAN24G3459 Fragaria x ananassa HOM05D000197 ORTHO05D000114 6.7e-07 57.0 60 43.3
Aa31LG7G7130 Aethionema arabicum HOM05D000197 ORTHO05D000114 8.7e-07 56.6 65 46.2
Cpa.g.sc139.24 Carica papaya HOM05D000197 ORTHO05D000114 8.7e-07 56.6 59 44.1
Manes.17G078800 Manihot esculenta HOM05D000197 ORTHO05D000114 8.7e-07 56.6 60 45.0
A07p37300 Brassica napus HOM05D000197 ORTHO05D000114 1.1e-06 56.2 59 47.5
BraA07t31290Z Brassica rapa HOM05D000197 ORTHO05D000114 1.1e-06 56.2 59 47.5
CANSAT64G0603 Cannabis sativa HOM05D000197 ORTHO05D000114 1.1e-06 56.2 55 47.3
Thhalv10019454m.g Eutrema salsugineum HOM05D000197 ORTHO05D000114 1.1e-06 56.2 64 42.2
Manes.15G130600 Manihot esculenta HOM05D000197 ORTHO05D000114 1.1e-06 56.2 68 41.2
Prupe.1G329000 Prunus persica HOM05D000197 ORTHO05D000114 1.1e-06 56.2 62 48.4
Atru.chr11.673 Acer truncatum HOM05D000197 ORTHO05D000114 1.5e-06 55.8 62 43.5
Aa31LG7G7100 Aethionema arabicum HOM05D000197 ORTHO05D000114 1.5e-06 55.8 55 45.5
BcaB05g24619 Brassica carinata HOM05D000197 ORTHO05D000114 1.5e-06 55.8 59 44.1
BolC6t39553H Brassica oleracea HOM05D000197 ORTHO05D000114 1.5e-06 55.8 55 49.1
CSS0010862 Camellia sinensis var. sinensis HOM05D000197 ORTHO05D000114 1.5e-06 55.8 69 40.6
CSS0031677 Camellia sinensis var. sinensis HOM05D000197 ORTHO05D000114 1.5e-06 55.8 69 40.6
CiPaw.05G192300 Carya illinoinensis HOM05D000197 ORTHO05D000114 1.5e-06 55.8 66 43.9
CiPaw.05G192800 Carya illinoinensis HOM05D000197 ORTHO05D000114 1.5e-06 55.8 66 43.9
Duzib268G0047 Durio zibethinus HOM05D000197 ORTHO05D000114 1.5e-06 55.8 65 41.5
Manes.15G130300 Manihot esculenta HOM05D000197 ORTHO05D000114 1.5e-06 55.8 64 43.8
A02p16920 Brassica napus HOM05D000197 ORTHO05D000114 1.9e-06 55.5 63 41.3
Cpa.g.c30095.3 Carica papaya HOM05D000197 ORTHO05D000114 1.9e-06 55.5 65 44.6
CiPaw.06G047600 Carya illinoinensis HOM05D000197 ORTHO05D000114 1.9e-06 55.5 56 53.6
Manes.17G079212 Manihot esculenta HOM05D000197 ORTHO05D000114 1.9e-06 55.5 71 38.0
QL03p033590 Quercus lobata HOM05D000197 ORTHO05D000114 1.9e-06 55.5 56 50.0
QL03p036876 Quercus lobata HOM05D000197 ORTHO05D000114 1.9e-06 55.5 56 51.8
QL03p036910 Quercus lobata HOM05D000197 ORTHO05D000114 1.9e-06 55.5 56 51.8
RcHm_v2.0_Chr1g0324501 Rosa chinensis HOM05D000197 ORTHO05D000114 1.9e-06 55.5 66 42.4
RcHm_v2.0_Chr6g0259451 Rosa chinensis HOM05D000197 ORTHO05D000114 1.9e-06 55.5 60 43.3
BcaB03g15565 Brassica carinata HOM05D000197 ORTHO05D000114 2.5e-06 55.1 63 41.3
A07p30890 Brassica napus HOM05D000197 ORTHO05D000114 2.5e-06 55.1 63 41.3
C02p28280 Brassica napus HOM05D000197 ORTHO05D000114 2.5e-06 55.1 63 41.3
BolC6t38711H Brassica oleracea HOM05D000197 ORTHO05D000114 2.5e-06 55.1 63 41.3
BraA07t30725Z Brassica rapa HOM05D000197 ORTHO05D000114 2.5e-06 55.1 63 41.3
Cfa014969 Carpinus fangiana HOM05D000197 ORTHO05D000114 2.5e-06 55.1 55 50.9
Manes.17G079268 Manihot esculenta HOM05D000197 ORTHO05D000114 2.5e-06 55.1 66 42.4
RcHm_v2.0_Chr4g0392511 Rosa chinensis HOM05D000197 ORTHO05D000114 2.5e-06 55.1 57 42.1
Thecc.02G285600 Theobroma cacao HOM05D000197 ORTHO05D000114 2.5e-06 55.1 59 40.7
Atru.chr11.697 Acer truncatum HOM05D000197 ORTHO05D000114 3.3e-06 54.7 61 47.5
BcaB03g14851 Brassica carinata HOM05D000197 ORTHO05D000114 3.3e-06 54.7 58 48.3
A02p17030 Brassica napus HOM05D000197 ORTHO05D000114 3.3e-06 54.7 63 42.9
A07p37290 Brassica napus HOM05D000197 ORTHO05D000114 3.3e-06 54.7 59 44.1
Cpa.g.sc49.140 Carica papaya HOM05D000197 ORTHO05D000114 3.3e-06 54.7 55 38.2
Ciclev10017056m.g Citrus clementina HOM05D000197 ORTHO05D000114 3.3e-06 54.7 67 44.8
RcHm_v2.0_Chr4g0392581 Rosa chinensis HOM05D000197 ORTHO05D000114 3.3e-06 54.7 57 40.4
BcaB03g15570 Brassica carinata HOM05D000197 ORTHO05D000114 4.3e-06 54.3 65 40.0
CARHR023500 Cardamine hirsuta HOM05D000197 ORTHO05D000114 4.3e-06 54.3 65 43.1
CsaV3_5G013650 Cucumis sativus L. HOM05D000197 ORTHO05D000114 4.3e-06 54.3 66 42.4
Thhalv10019117m.g Eutrema salsugineum HOM05D000197 ORTHO05D000114 4.3e-06 54.3 55 47.3
Prupe.1G327400 Prunus persica HOM05D000197 ORTHO05D000114 4.3e-06 54.3 66 39.4
Sabra10G0081200 Salix brachista HOM05D000197 ORTHO05D000114 4.3e-06 54.3 60 45.0
TWI77G0113 Tripterygium wilfordii HOM05D000197 ORTHO05D000114 4.3e-06 54.3 64 43.8
AL6G40180 Arabidopsis lyrata HOM05D000197 ORTHO05D000114 5.6e-06 53.9 61 39.3
AT1G70890 Arabidopsis thaliana HOM05D000197 ORTHO05D000114 5.6e-06 53.9 67 37.3
Ciclev10017039m.g Citrus clementina HOM05D000197 ORTHO05D000114 5.6e-06 53.9 63 41.3
Manes.15G130400 Manihot esculenta HOM05D000197 ORTHO05D000114 5.6e-06 53.9 68 39.7
Manes.17G079050 Manihot esculenta HOM05D000197 ORTHO05D000114 5.6e-06 53.9 71 38.0
Manes.17G079500 Manihot esculenta HOM05D000197 ORTHO05D000114 5.6e-06 53.9 66 40.9
Prupe.1G328800 Prunus persica HOM05D000197 ORTHO05D000114 5.6e-06 53.9 62 48.4
Sabra10G0081300 Salix brachista HOM05D000197 ORTHO05D000114 5.6e-06 53.9 60 43.3
Sed0012004 Sechium edule HOM05D000197 ORTHO05D000114 5.6e-06 53.9 63 38.1
Sed0017294 Sechium edule HOM05D000197 ORTHO05D000114 5.6e-06 53.9 63 39.7
Atru.chr11.872 Acer truncatum HOM05D000197 ORTHO05D000114 7.4e-06 53.5 60 46.7
AL173U10010 Arabidopsis lyrata HOM05D000197 ORTHO05D000114 7.4e-06 53.5 55 47.3
C08p21730 Brassica napus HOM05D000197 ORTHO05D000114 7.4e-06 53.5 55 41.8
Manes.17G079156 Manihot esculenta HOM05D000197 ORTHO05D000114 7.4e-06 53.5 66 40.9
BcaB03g14846 Brassica carinata HOM05D000197 ORTHO05D000114 9.6e-06 53.1 65 41.5
BcaB03g15577 Brassica carinata HOM05D000197 ORTHO05D000114 9.6e-06 53.1 63 39.7
BcaC07g39183 Brassica carinata HOM05D000197 ORTHO05D000114 9.6e-06 53.1 55 41.8
BcaC08g46531 Brassica carinata HOM05D000197 ORTHO05D000114 9.6e-06 53.1 65 43.1
A08p28370 Brassica napus HOM05D000197 ORTHO05D000114 9.6e-06 53.1 55 41.8
BolC8t49811H Brassica oleracea HOM05D000197 ORTHO05D000114 9.6e-06 53.1 55 41.8
BraA08t34767Z Brassica rapa HOM05D000197 ORTHO05D000114 9.6e-06 53.1 55 41.8
Carub.0002s1767 Capsella rubella HOM05D000197 ORTHO05D000114 9.6e-06 53.1 65 43.1
CARHR023510 Cardamine hirsuta HOM05D000197 ORTHO05D000114 9.6e-06 53.1 59 45.8
CARHR023550 Cardamine hirsuta HOM05D000197 ORTHO05D000114 9.6e-06 53.1 65 41.5
CARHR064100 Cardamine hirsuta HOM05D000197 ORTHO05D000114 9.6e-06 53.1 55 47.3
COL.COLO4_13130 Corchorus olitorius HOM05D000197 ORTHO05D000114 9.6e-06 53.1 59 39.0
Potri.008G131200 Populus trichocarpa HOM05D000197 ORTHO05D000114 9.6e-06 53.1 63 38.1


User provided reference genes

Program Settings