Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p025652 Quercus lobata HOM05D000051 ORTHO05D011342 1.1e-109 399.8 189 100.0
QL05p025648 Quercus lobata HOM05D000051 ORTHO05D000015 1.3e-73 280.0 144 91.0
QL05p025606 Quercus lobata HOM05D000051 ORTHO05D000015 2.4e-35 152.9 143 51.0
QL05p025638 Quercus lobata HOM05D000051 ORTHO05D000015 2.2e-28 129.8 134 49.3
Dinv20164 Davidia involucrata HOM05D000051 ORTHO05D000015 3.9e-17 92.4 133 39.1
Dinv20165 Davidia involucrata HOM05D000051 ORTHO05D000015 3.1e-14 82.8 108 39.8
Thecc.07G080700 Theobroma cacao HOM05D000051 ORTHO05D000015 1.9e-11 73.6 129 35.7
Migut.M00840 Erythranthe guttata HOM05D000051 ORTHO05D000015 5.5e-11 72.0 95 43.2
QL08p010791 Quercus lobata HOM05D000051 ORTHO05D000015 7.1e-11 71.6 125 35.2
QL08p011390 Quercus lobata HOM05D000051 ORTHO05D000015 2.7e-10 69.7 126 34.9
QL08p020709 Quercus lobata HOM05D000051 ORTHO05D000015 3.5e-10 69.3 127 36.2
Lalb_Chr01g0022261 Lupinus albus HOM05D000051 ORTHO05D000015 4.6e-10 68.9 125 34.4
Prupe.4G160800 Prunus persica HOM05D000051 ORTHO05D000015 4.6e-10 68.9 157 28.0
QL08p011216 Quercus lobata HOM05D000051 ORTHO05D000015 7.9e-10 68.2 125 36.0
CSS0042330 Camellia sinensis var. sinensis HOM05D000051 ORTHO05D000015 1.8e-09 67.0 110 38.2
Migut.M00821 Erythranthe guttata HOM05D000051 ORTHO05D000015 2.3e-09 66.6 92 40.2
Lj1A868G40 Lonicera japonica HOM05D000051 ORTHO05D000015 2.3e-09 66.6 139 37.4
Medtr7g098480 Medicago truncatula HOM05D000051 ORTHO05D000015 2.3e-09 66.6 103 38.8
QL08p010781 Quercus lobata HOM05D000051 ORTHO05D000015 2.3e-09 66.6 96 39.6
QL08p020672 Quercus lobata HOM05D000051 ORTHO05D000015 3.0e-09 66.2 127 34.6
RcHm_v2.0_Chr5g0030631 Rosa chinensis HOM05D000051 ORTHO05D000015 3.9e-09 65.9 157 31.2
Lj3C73G19 Lonicera japonica HOM05D000051 ORTHO05D014235 5.1e-09 65.5 134 36.6
MD03G1253500 Malus domestica HOM05D000051 ORTHO05D000015 5.1e-09 65.5 106 35.8
Migut.M00832 Erythranthe guttata HOM05D000051 ORTHO05D000015 6.7e-09 65.1 93 39.8
Lalb_Chr24g0395931 Lupinus albus HOM05D000051 ORTHO05D000015 6.7e-09 65.1 126 31.0
QL08p010769 Quercus lobata HOM05D000051 ORTHO05D000015 6.7e-09 65.1 135 33.3
Duzib213G0041 Durio zibethinus HOM05D000051 ORTHO05D000015 1.1e-08 64.3 108 38.0
Lj1A868T32 Lonicera japonica HOM05D000051 ORTHO05D000015 1.1e-08 64.3 100 42.0
Medtr7g098570 Medicago truncatula HOM05D000051 ORTHO05D000015 1.5e-08 63.9 82 40.2
RcHm_v2.0_Chr5g0059961 Rosa chinensis HOM05D000051 ORTHO05D000015 1.5e-08 63.9 135 37.0
Migut.M00817 Erythranthe guttata HOM05D000051 ORTHO05D000015 2.5e-08 63.2 78 44.9
Migut.N01904 Erythranthe guttata HOM05D000051 ORTHO05D000015 2.5e-08 63.2 93 39.8
Oeu013813.1 Olea europaea HOM05D000051 ORTHO05D000015 2.5e-08 63.2 78 44.9
Potri.011G121500 Populus trichocarpa HOM05D000051 ORTHO05D000015 2.5e-08 63.2 113 34.5
Prupe.4G151700 Prunus persica HOM05D000051 ORTHO05D000015 2.5e-08 63.2 125 35.2
Migut.M00820 Erythranthe guttata HOM05D000051 ORTHO05D000015 3.3e-08 62.8 103 38.8
Migut.M00835 Erythranthe guttata HOM05D000051 ORTHO05D000015 3.3e-08 62.8 95 41.1
Medtr7g098510 Medicago truncatula HOM05D000051 ORTHO05D000015 3.3e-08 62.8 114 34.2
Cc05_g12180 Coffea canephora HOM05D000051 ORTHO05D000015 4.3e-08 62.4 127 32.3
Migut.M00828 Erythranthe guttata HOM05D000051 ORTHO05D000015 4.3e-08 62.4 128 32.8
Migut.M00845 Erythranthe guttata HOM05D000051 ORTHO05D000015 4.3e-08 62.4 92 39.1
Potri.011G121400 Populus trichocarpa HOM05D000051 ORTHO05D000015 4.3e-08 62.4 112 35.7
QL08p011226 Quercus lobata HOM05D000051 ORTHO05D000015 4.3e-08 62.4 135 32.6
SGA_v2.0_scaffold73G24284 Striga asiatica HOM05D000051 ORTHO05D000015 4.3e-08 62.4 116 31.0
Dinv38189 Davidia involucrata HOM05D000051 ORTHO05D000015 5.7e-08 62.0 161 31.7
Duzib213G0051 Durio zibethinus HOM05D000051 ORTHO05D000015 5.7e-08 62.0 127 32.3
Medtr7g032380 Medicago truncatula HOM05D000051 ORTHO05D000015 5.7e-08 62.0 88 37.5
QL05p062669 Quercus lobata HOM05D000051 ORTHO05D000015 7.4e-08 61.6 124 33.9
QL08p019881 Quercus lobata HOM05D000051 ORTHO05D000015 7.4e-08 61.6 133 33.1
QL08p020517 Quercus lobata HOM05D000051 ORTHO05D000015 7.4e-08 61.6 95 37.9
CAN.G397.63 Capsicum annuum HOM05D000051 ORTHO05D000015 9.7e-08 61.2 133 34.6
Medtr7g115270 Medicago truncatula HOM05D000051 ORTHO05D000015 9.7e-08 61.2 81 35.8
Cc05_g13420 Coffea canephora HOM05D000051 ORTHO05D000015 1.3e-07 60.8 143 32.2
COL.COLO4_09414 Corchorus olitorius HOM05D000051 ORTHO05D000015 1.3e-07 60.8 112 32.1
Medtr1g041245 Medicago truncatula HOM05D000051 ORTHO05D000015 1.3e-07 60.8 91 37.4
QL08p010809 Quercus lobata HOM05D000051 ORTHO05D000015 1.3e-07 60.8 135 31.9
QL08p011365 Quercus lobata HOM05D000051 ORTHO05D000015 1.3e-07 60.8 126 33.3
GSVIVG01038076001 Vitis vinifera HOM05D000051 ORTHO05D000015 1.3e-07 60.8 102 36.3
Medtr7g034115 Medicago truncatula HOM05D000051 ORTHO05D000015 1.6e-07 60.5 88 38.6
AUR62009188 Chenopodium quinoa HOM05D000051 ORTHO05D004973 2.2e-07 60.1 102 38.2
DCAR_017364 Daucus carota HOM05D000051 ORTHO05D000015 2.2e-07 60.1 137 29.9
Dinv17485 Davidia involucrata HOM05D000051 ORTHO05D000015 2.2e-07 60.1 143 33.6
Dinv42542 Davidia involucrata HOM05D000051 ORTHO05D000015 2.2e-07 60.1 102 39.2
Migut.G00077 Erythranthe guttata HOM05D000051 ORTHO05D000015 2.2e-07 60.1 93 38.7
Migut.G00078 Erythranthe guttata HOM05D000051 ORTHO05D000015 2.2e-07 60.1 90 37.8
FvH4_6g08520 Fragaria vesca HOM05D000051 ORTHO05D000015 2.2e-07 60.1 171 29.8
FAN14G1262 Fragaria x ananassa HOM05D005826 ORTHO05D004357 2.2e-07 60.1 171 30.4
QL08p019904 Quercus lobata HOM05D000051 ORTHO05D000015 2.2e-07 60.1 133 32.3
Thecc.07G080800 Theobroma cacao HOM05D000051 ORTHO05D000015 2.2e-07 60.1 127 31.5
Actinidia06264 Actinidia chinensis HOM05D000051 ORTHO05D000015 2.8e-07 59.7 107 35.5
AL8G14500 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 2.8e-07 59.7 126 31.7
QL08p010755 Quercus lobata HOM05D000051 ORTHO05D000015 2.8e-07 59.7 92 37.0
QL08p011195 Quercus lobata HOM05D000051 ORTHO05D000015 2.8e-07 59.7 92 37.0
Lj8A145G72 Lonicera japonica HOM05D000051 ORTHO05D000015 3.7e-07 59.3 100 37.0
Nitab4.5_0000692g0190 Nicotiana tabacum HOM05D000051 ORTHO05D011342 3.7e-07 59.3 97 42.3
Rhsim13G0198300 Rhododendron simsii HOM05D000051 ORTHO05D000015 3.7e-07 59.3 87 39.1
Cc09_g05350 Coffea canephora HOM05D000051 ORTHO05D000015 4.8e-07 58.9 136 30.1
Dinv17488 Davidia involucrata HOM05D000051 ORTHO05D000015 4.8e-07 58.9 86 41.9
Lsat_1_v5_gn_0_21100 Lactuca sativa HOM05D000051 ORTHO05D000015 4.8e-07 58.9 102 30.4
Psat0s3611g0160 Pisum sativum HOM05D000051 ORTHO05D000015 4.8e-07 58.9 101 33.7
Psat4g122640 Pisum sativum HOM05D000051 ORTHO05D000015 4.8e-07 58.9 125 30.4
Sc13g0005680 Simmondsia chinensis HOM05D000051 ORTHO05D000015 4.8e-07 58.9 98 33.7
PGSC0003DMG400008873 Solanum tuberosum HOM05D000051 ORTHO05D011342 4.8e-07 58.9 146 32.2
MD11G1265300 Malus domestica HOM05D000051 ORTHO05D000015 6.3e-07 58.5 110 34.5
Medtr7g033915 Medicago truncatula HOM05D000051 ORTHO05D000015 6.3e-07 58.5 81 38.3
Medtr7g033990 Medicago truncatula HOM05D000051 ORTHO05D000015 6.3e-07 58.5 81 38.3
Medtr7g056280 Medicago truncatula HOM05D017956 ORTHO05D000015 8.2e-07 58.2 131 32.1
RhsimUnG0166000 Rhododendron simsii HOM05D000051 ORTHO05D000015 8.2e-07 58.2 108 37.0
vmacro11759 Vaccinium macrocarpon HOM05D000051 ORTHO05D000015 8.2e-07 58.2 91 37.4
MD11G1266800 Malus domestica HOM05D000051 ORTHO05D000015 1.1e-06 57.8 107 34.6
CSS0000750 Camellia sinensis var. sinensis HOM05D000051 ORTHO05D000015 1.4e-06 57.4 82 39.0
Migut.M00627 Erythranthe guttata HOM05D000051 ORTHO05D000015 1.4e-06 57.4 77 42.9
FvH4_3g18162 Fragaria vesca HOM05D000051 ORTHO05D045903 1.4e-06 57.4 95 40.0
FAN21G3599 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.4e-06 57.4 107 34.6
Gohir.A11G283200 Gossypium hirsutum HOM05D000051 ORTHO05D000015 1.4e-06 57.4 81 39.5
MD11G1267000 Malus domestica HOM05D000051 ORTHO05D000015 1.4e-06 57.4 100 37.0
Peaxi162Scf00853g00215 Petunia axillaris HOM05D000051 ORTHO05D011342 1.4e-06 57.4 78 43.6
RcHm_v2.0_Chr5g0028521 Rosa chinensis HOM05D000051 ORTHO05D000015 1.4e-06 57.4 117 32.5
SGA_v2.0_scaffold70G23552 Striga asiatica HOM05D000051 ORTHO05D000015 1.4e-06 57.4 94 40.4
vmacro08518 Vaccinium macrocarpon HOM05D000051 ORTHO05D000015 1.4e-06 57.4 120 32.5
CAN.G1585.10 Capsicum annuum HOM05D000051 ORTHO05D011342 1.8e-06 57.0 126 33.3
Dinv39820 Davidia involucrata HOM05D001396 ORTHO05D000493 1.8e-06 57.0 115 35.7
Medtr3g108560 Medicago truncatula HOM05D000051 ORTHO05D000015 1.8e-06 57.0 81 38.3
Nitab4.5_0004837g0060 Nicotiana tabacum HOM05D000051 ORTHO05D011342 1.8e-06 57.0 75 44.0
SGA_v2.0_scaffold25G10772 Striga asiatica HOM05D000051 ORTHO05D000015 1.8e-06 57.0 89 38.2
SGA_v2.0_scaffold70G23556 Striga asiatica HOM05D000051 ORTHO05D000015 1.8e-06 57.0 99 39.4
Lj9A580T63 Lonicera japonica HOM05D000051 ORTHO05D000015 2.4e-06 56.6 162 31.5
RcHm_v2.0_Chr5g0028401 Rosa chinensis HOM05D000051 ORTHO05D000015 2.4e-06 56.6 102 39.2
Solyc09g009920.1 Solanum lycopersicum HOM05D000051 ORTHO05D000015 2.4e-06 56.6 91 38.5
Sopen09g004670 Solanum pennellii HOM05D000051 ORTHO05D011342 2.4e-06 56.6 91 38.5
CSS0042719 Camellia sinensis var. sinensis HOM05D000051 ORTHO05D000015 3.1e-06 56.2 85 36.5
Ciclev10011675m.g Citrus clementina HOM05D000051 ORTHO05D000015 3.1e-06 56.2 136 30.1
Dinv21722 Davidia involucrata HOM05D000051 ORTHO05D000015 3.1e-06 56.2 133 33.8
MD03G1255400 Malus domestica HOM05D000051 ORTHO05D000015 3.1e-06 56.2 107 34.6
MD11G1266000 Malus domestica HOM05D000051 ORTHO05D000015 3.1e-06 56.2 134 32.8
Psat5g026880 Pisum sativum HOM05D000051 ORTHO05D000015 3.1e-06 56.2 102 30.4
QL08p020617 Quercus lobata HOM05D000051 ORTHO05D000015 3.1e-06 56.2 88 37.5
SGA_v2.0_scaffold34G13737 Striga asiatica HOM05D000051 ORTHO05D000015 3.1e-06 56.2 83 41.0
CSS0042786 Camellia sinensis var. sinensis HOM05D000051 ORTHO05D000015 4.1e-06 55.8 85 36.5
COL.COLO4_00389 Corchorus olitorius HOM05D000051 ORTHO05D000015 4.1e-06 55.8 109 32.1
QL08p010742 Quercus lobata HOM05D000051 ORTHO05D000015 4.1e-06 55.8 92 34.8
COL.COLO4_09415 Corchorus olitorius HOM05D000051 ORTHO05D000015 5.3e-06 55.5 102 35.3
Migut.M00206 Erythranthe guttata HOM05D000051 ORTHO05D000015 5.3e-06 55.5 84 38.1
SGA_v2.0_scaffold70G23547 Striga asiatica HOM05D000051 ORTHO05D000015 5.3e-06 55.5 100 36.0
TPR.G14576 Trifolium pratense HOM05D000009 ORTHO05D000008 5.3e-06 55.5 101 30.7
Actinidia05113 Actinidia chinensis HOM05D000051 ORTHO05D000015 6.9e-06 55.1 80 40.0
AL1G25580 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 6.9e-06 55.1 125 31.2
Dinv17487 Davidia involucrata HOM05D000051 ORTHO05D000015 6.9e-06 55.1 171 29.8
Migut.M00548 Erythranthe guttata HOM05D000051 ORTHO05D000015 6.9e-06 55.1 78 41.0
Gohir.D11G296768 Gossypium hirsutum HOM05D000051 ORTHO05D000015 6.9e-06 55.1 81 38.3
Gohir.D11G296776 Gossypium hirsutum HOM05D000051 ORTHO05D000015 6.9e-06 55.1 81 38.3
Gorai.007G321500 Gossypium raimondii HOM05D000051 ORTHO05D000015 6.9e-06 55.1 81 38.3
Rhsim06G0215100 Rhododendron simsii HOM05D000051 ORTHO05D000015 6.9e-06 55.1 98 38.8
Rhsim07G0063700 Rhododendron simsii HOM05D000051 ORTHO05D000015 6.9e-06 55.1 112 34.8
vmacro11746 Vaccinium macrocarpon HOM05D000051 ORTHO05D000015 6.9e-06 55.1 103 35.0
Migut.G00076 Erythranthe guttata HOM05D000051 ORTHO05D000015 9.0e-06 54.7 93 38.7
Migut.M00829 Erythranthe guttata HOM05D000051 ORTHO05D000015 9.0e-06 54.7 127 35.4
Lj4A467T12 Lonicera japonica HOM05D000051 ORTHO05D000015 9.0e-06 54.7 128 32.0
Psat5g042320 Pisum sativum HOM05D000051 ORTHO05D000015 9.0e-06 54.7 115 31.3


User provided reference genes

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