Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p024308 Quercus lobata HOM05D004642 ORTHO05D005466 2.9e-302 1041.6 726 100.0
Cfa002061 Carpinus fangiana HOM05D004642 ORTHO05D005466 1.5e-170 604.0 726 63.9
Prupe.3G071700 Prunus persica HOM05D004642 ORTHO05D005466 1.4e-160 570.9 717 52.6
Haze_16437 Corylus avellana HOM05D004642 ORTHO05D005466 2.8e-156 556.6 632 67.6
CiPaw.01G239700 Carya illinoinensis HOM05D004642 ORTHO05D005466 1.1e-144 518.1 727 60.0
Thecc.06G086400 Theobroma cacao HOM05D004642 ORTHO05D005466 1.1e-144 518.1 774 58.9
MD17G1195700 Malus domestica HOM05D004642 ORTHO05D005466 5.2e-134 482.6 721 50.9
CiPaw.02G151400 Carya illinoinensis HOM05D004642 ORTHO05D005466 1.8e-131 474.2 722 57.1
Potri.001G179600 Populus trichocarpa HOM05D004642 ORTHO05D005466 2.4e-131 473.8 758 47.8
Duzib235G0715 Durio zibethinus HOM05D004642 ORTHO05D005466 3.2e-128 463.4 766 54.7
vmacro18915 Vaccinium macrocarpon HOM05D004642 ORTHO05D005466 2.8e-124 450.3 688 47.4
Nitab4.5_0005851g0030 Nicotiana tabacum HOM05D004642 ORTHO05D005466 3.5e-122 443.4 722 49.9
Nitab4.5_0000671g0060 Nicotiana tabacum HOM05D004642 ORTHO05D005466 1.5e-120 438.0 688 51.7
Actinidia08974 Actinidia chinensis HOM05D004642 ORTHO05D005466 8.3e-116 422.2 717 50.3
Rhsim08G0221000 Rhododendron simsii HOM05D004642 ORTHO05D005466 4.5e-114 416.4 711 48.8
MD09G1213800 Malus domestica HOM05D004642 ORTHO05D005466 3.3e-112 410.2 700 52.9
Gohir.A05G129515 Gossypium hirsutum HOM05D004642 ORTHO05D005466 2.8e-111 407.1 731 52.3
Actinidia24760 Actinidia chinensis HOM05D004642 ORTHO05D005466 1.8e-110 404.4 541 56.6
Gorai.009G133100 Gossypium raimondii HOM05D004642 ORTHO05D005466 7.5e-109 399.1 736 51.2
TAR626G0806 Trochodendron aralioides HOM05D004642 ORTHO05D005466 1.3e-108 398.3 676 51.6
Gohir.D05G129000 Gossypium hirsutum HOM05D004642 ORTHO05D005466 3.5e-106 390.2 736 51.0
Sabra01G0147200 Salix brachista HOM05D004642 ORTHO05D005466 3.5e-106 390.2 833 46.3
CSS0030593 Camellia sinensis var. sinensis HOM05D004642 ORTHO05D005466 1.7e-105 387.9 565 62.5
Lalb_Chr14g0373421 Lupinus albus HOM05D004642 ORTHO05D005466 1.2e-103 381.7 724 45.7
Cc04_g03480 Coffea canephora HOM05D004642 ORTHO05D005466 2.8e-103 380.6 680 39.6
Duzib192G0922 Durio zibethinus HOM05D004642 ORTHO05D005466 8.0e-103 379.0 741 53.8
Manes.11G047800 Manihot esculenta HOM05D004642 ORTHO05D005466 5.8e-101 372.9 726 52.9
Glyma.12G087100 Glycine max HOM05D004642 ORTHO05D005466 1.7e-97 361.3 743 46.7
Gohir.A09G083200 Gossypium hirsutum HOM05D004642 ORTHO05D005466 3.0e-97 360.5 770 43.6
Atru.chr1.3266 Acer truncatum HOM05D004642 ORTHO05D005466 5.0e-97 359.8 731 50.6
FAN14G2337 Fragaria x ananassa HOM05D004642 ORTHO05D005466 3.3e-96 357.1 735 55.1
Gorai.006G098800 Gossypium raimondii HOM05D004642 ORTHO05D005466 1.2e-95 355.1 774 43.7
Gohir.D09G083200 Gossypium hirsutum HOM05D004642 ORTHO05D005466 4.0e-94 350.1 770 43.9
FvH4_6g31081 Fragaria vesca HOM05D004642 ORTHO05D005466 1.2e-93 348.6 726 55.0
Ciclev10025273m.g Citrus clementina HOM05D004642 ORTHO05D005466 2.6e-93 347.4 569 56.4
Sed0016916 Sechium edule HOM05D004642 ORTHO05D005466 2.6e-93 347.4 728 48.1
PGR102G3321 Punica granatum HOM05D004642 ORTHO05D005466 1.3e-92 345.1 525 54.1
CsaV3_7G033140 Cucumis sativus L. HOM05D004642 ORTHO05D005466 2.2e-92 344.4 729 47.3
Dinv30514 Davidia involucrata HOM05D004642 ORTHO05D005466 9.2e-91 339.0 635 51.0
Rhsim12G0197600 Rhododendron simsii HOM05D004642 ORTHO05D005466 9.2e-91 339.0 715 49.5
COL.COLO4_30362 Corchorus olitorius HOM05D004642 ORTHO05D005466 7.8e-90 335.9 799 49.2
Hma1.2p1_0323F.1_g125210 Hydrangea macrophylla HOM05D004642 ORTHO05D005466 1.0e-89 335.5 724 47.9
GSVIVG01017115001 Vitis vinifera HOM05D004642 ORTHO05D005466 1.3e-89 335.1 537 52.7
vmacro16950 Vaccinium macrocarpon HOM05D004642 ORTHO05D005466 3.3e-88 330.5 724 47.1
Lalb_Chr04g0262651 Lupinus albus HOM05D004642 ORTHO05D005466 2.8e-87 327.4 733 44.7
RcHm_v2.0_Chr2g0137781 Rosa chinensis HOM05D004642 ORTHO05D005466 8.9e-86 322.4 729 50.5
AUR62016441 Chenopodium quinoa HOM05D004642 ORTHO05D005466 1.5e-85 321.6 712 41.6
PSO782G0786 Papaver somniferum HOM05D004642 ORTHO05D005466 5.8e-85 319.7 719 35.6
Ca_19383_v3 Cicer arietinum L. HOM05D004642 ORTHO05D005466 1.3e-84 318.5 726 51.5
Solyc03g120230.3 Solanum lycopersicum HOM05D004642 ORTHO05D005466 2.2e-84 317.8 706 45.2
Lj3g0008789 Lotus japonicus HOM05D004642 ORTHO05D005466 2.4e-83 314.3 756 45.9
Glyma.11G187500 Glycine max HOM05D004642 ORTHO05D005466 9.2e-83 312.4 745 43.6
Sopen03g039110 Solanum pennellii HOM05D004642 ORTHO05D005466 1.2e-82 312.0 706 44.1
ClCG09G002170 Citrullus lanatus HOM05D004642 ORTHO05D005466 1.6e-82 311.6 728 46.0
Aqoxy7G01787 Aquilegia oxysepala HOM05D004642 ORTHO05D005466 1.3e-81 308.5 729 46.1
SalBow2G0306 Salvia bowleyana HOM05D004642 ORTHO05D005466 4.3e-80 303.5 706 42.4
Thhalv10020153m.g Eutrema salsugineum HOM05D004642 ORTHO05D005466 5.6e-80 303.1 728 39.7
Phvul.011G092000 Phaseolus vulgaris HOM05D004642 ORTHO05D005466 2.8e-79 300.8 744 48.7
Aa31LG8G3170 Aethionema arabicum HOM05D004642 ORTHO05D005466 4.7e-79 300.1 724 41.6
Lsat_1_v5_gn_4_103580 Lactuca sativa HOM05D004642 ORTHO05D005466 6.2e-79 299.7 738 42.3
AUR62011627 Chenopodium quinoa HOM05D004642 ORTHO05D005466 1.1e-78 298.9 712 42.1
Nn2g11790 Nelumbo nucifera HOM05D004642 ORTHO05D005466 3.1e-78 297.4 733 40.2
PGSC0003DMG400002564 Solanum tuberosum HOM05D004642 ORTHO05D005466 3.1e-78 297.4 676 42.5
MELO3C024228.2 Cucumis melo HOM05D004642 ORTHO05D005466 9.0e-78 295.8 728 42.3
Psat7g189080 Pisum sativum HOM05D004642 ORTHO05D005466 7.6e-77 292.7 731 47.1
Eucgr.F03012 Eucalyptus grandis HOM05D004642 ORTHO05D005466 1.3e-76 292.0 727 45.8
FAN09G1651 Fragaria x ananassa HOM05D004642 ORTHO05D005466 1.3e-76 292.0 736 50.8
Ah.01g021290 Amaranthus hybridus HOM05D004642 ORTHO05D005466 3.8e-76 290.4 714 41.6
Nn8g39228 Nelumbo nucifera HOM05D004642 ORTHO05D005466 1.4e-75 288.5 732 42.3
Sed0016127 Sechium edule HOM05D004642 ORTHO05D005466 7.1e-75 286.2 622 44.1
VMungo1127G1134 Vigna mungo HOM05D004642 ORTHO05D005466 1.1e-72 278.9 749 42.9
Peaxi162Scf00015g00335 Petunia axillaris HOM05D004642 ORTHO05D005466 4.8e-71 273.5 688 44.9
CARHR091130 Cardamine hirsuta HOM05D004642 ORTHO05D005466 8.1e-71 272.7 726 38.4
Lj5A61G44 Lonicera japonica HOM05D004642 ORTHO05D005466 8.1e-71 272.7 676 42.3
Medtr4g054960 Medicago truncatula HOM05D004642 ORTHO05D005466 6.9e-70 269.6 661 44.5
Hund00614 Selenicereus undatus HOM05D004642 ORTHO05D005466 5.8e-69 266.5 685 42.6
TWI75G1656 Tripterygium wilfordii HOM05D004642 ORTHO05D005466 1.3e-68 265.4 532 44.2
FAN05G5776 Fragaria x ananassa HOM05D004642 ORTHO05D005466 1.2e-66 258.8 732 50.0
BraA03t13110Z Brassica rapa HOM05D004642 ORTHO05D005466 2.7e-66 257.7 530 44.5
SGA_v2.0_scaffold4G01996 Striga asiatica HOM05D004642 ORTHO05D005466 2.3e-65 254.6 695 35.5
Lalb_Chr01g0012651 Lupinus albus HOM05D004642 ORTHO05D005466 1.1e-64 252.3 715 39.4
CANSAT56G1090 Cannabis sativa HOM05D004642 ORTHO05D005466 4.3e-64 250.4 741 49.3
Oeu033484.1 Olea europaea HOM05D004642 ORTHO05D005466 4.3e-64 250.4 693 41.7
BcaC09g48580 Brassica carinata HOM05D004642 ORTHO05D005466 7.4e-64 249.6 709 31.3
unitig_578.g16688 Utricularia gibba HOM05D004642 ORTHO05D005466 4.8e-63 246.9 761 37.2
THA.LOC104817998 Tarenaya hassleriana HOM05D004642 ORTHO05D005466 1.4e-62 245.4 729 41.7
Sc21g0005100 Simmondsia chinensis HOM05D004642 ORTHO05D005466 1.9e-59 235.0 730 45.1
A03p39630 Brassica napus HOM05D004642 ORTHO05D005466 2.4e-59 234.6 531 43.1
PSO063G4770 Papaver somniferum HOM05D004642 ORTHO05D005466 2.4e-59 234.6 718 31.8
TPR.G15588 Trifolium pratense HOM05D004642 ORTHO05D005466 1.2e-58 232.3 633 44.1
AT3G16000 Arabidopsis thaliana HOM05D004642 ORTHO05D005466 3.5e-58 230.7 729 45.1
Hund06610 Selenicereus undatus HOM05D004642 ORTHO05D005466 4.6e-58 230.3 757 33.0
Zm00001eb283760 Zea mays HOM05D004642 ORTHO05D005466 5.1e-57 226.9 654 39.1
arahy.Tifrunner.gnm1.ann1.CA04QB Arachis hypogaea HOM05D004642 ORTHO05D005466 6.7e-57 226.5 665 45.4
arahy.Tifrunner.gnm1.ann1.Z6VQ0W Arachis hypogaea HOM05D004642 ORTHO05D005466 6.7e-57 226.5 665 45.4
BcaB04g20887 Brassica carinata HOM05D004642 ORTHO05D005466 1.1e-56 225.7 696 31.8
A05p33450 Brassica napus HOM05D004642 ORTHO05D005466 3.3e-56 224.2 552 40.8
AL3G28650 Arabidopsis lyrata HOM05D004642 ORTHO05D005466 6.2e-55 219.9 727 44.3
BcaB04g18872 Brassica carinata HOM05D004642 ORTHO05D005466 6.2e-55 219.9 702 38.0
BolC5t33791H Brassica oleracea HOM05D004642 ORTHO05D005466 3.4e-53 214.2 551 44.8
Migut.D01034 Erythranthe guttata HOM05D004642 ORTHO05D005466 3.8e-52 210.7 670 40.7
C03p48030 Brassica napus HOM05D004642 ORTHO05D005466 4.9e-52 210.3 699 39.5
BcaC01g03843 Brassica carinata HOM05D004642 ORTHO05D005466 1.1e-51 209.1 699 39.5
BolC3t17082H Brassica oleracea HOM05D004642 ORTHO05D005466 1.1e-51 209.1 699 39.5
Carub.0003s1573 Capsella rubella HOM05D004642 ORTHO05D005466 3.2e-51 207.6 715 43.9
BraA05t22169Z Brassica rapa HOM05D004642 ORTHO05D005466 7.1e-51 206.5 553 45.0
TAR636G0382 Trochodendron aralioides HOM05D004642 ORTHO05D005466 2.1e-50 204.9 279 48.0
CAN.G438.64 Capsicum annuum HOM05D004642 ORTHO05D005466 1.1e-48 199.1 722 39.6
Sp3g14350 Schrenkiella parvula HOM05D004642 ORTHO05D005466 1.1e-48 199.1 728 39.0
BcaB06g25698 Brassica carinata HOM05D004642 ORTHO05D005466 1.5e-48 198.7 730 38.1
Dinv38051 Davidia involucrata HOM05D004642 ORTHO05D005466 3.3e-48 197.6 335 42.1
SalBow2G2616 Salvia bowleyana HOM05D004642 ORTHO05D005466 9.7e-48 196.1 496 45.8
arahy.Tifrunner.gnm1.ann1.I53961 Arachis hypogaea HOM05D004642 ORTHO05D005466 4.8e-47 193.7 553 42.3
HanXRQChr16g0500971 Helianthus annuus HOM05D004642 ORTHO05D005466 9.0e-46 189.5 710 36.8
HPP92_020045 Vanilla planifolia HOM05D004642 ORTHO05D005466 9.0e-46 189.5 716 32.0
ATR0037G055 Amborella trichopoda HOM05D004642 ORTHO05D005466 1.5e-45 188.7 705 37.7
EL10Ac9g21996 Beta vulgaris HOM05D004642 ORTHO05D005466 1.3e-44 185.7 708 43.9
HanXRQChr09g0275271 Helianthus annuus HOM05D004642 ORTHO05D005466 1.3e-44 185.7 538 45.7
arahy.Tifrunner.gnm1.ann1.D5EQ93 Arachis hypogaea HOM05D004642 ORTHO05D005466 2.9e-44 184.5 558 41.6
CDE07G1358 Ceratophyllum demersum HOM05D004642 ORTHO05D005466 2.9e-44 184.5 613 29.2
unitig_744.g24335 Utricularia gibba HOM05D004642 ORTHO05D005466 1.4e-43 182.2 652 32.5
FAN02G1410 Fragaria x ananassa HOM05D004642 ORTHO05D005466 2.1e-42 178.3 243 49.4
MD09G1213500 Malus domestica HOM05D004642 ORTHO05D005466 3.6e-42 177.6 322 52.8
Hma1.2p1_0323F.1_g125200 Hydrangea macrophylla HOM05D004642 ORTHO05D005466 7.9e-42 176.4 166 59.0
CDE06G0246 Ceratophyllum demersum HOM05D004642 ORTHO05D005466 1.0e-41 176.0 612 32.7
ECA248G0988 Erigeron canadensis HOM05D004642 ORTHO05D005466 5.7e-40 170.2 440 40.9
TAR624G1258 Trochodendron aralioides HOM05D004642 ORTHO05D005466 5.7e-40 170.2 301 46.5
C05p50450 Brassica napus HOM05D004642 ORTHO05D005466 7.4e-40 169.9 696 43.1
C01p48370 Brassica napus HOM05D004642 ORTHO05D005466 6.3e-39 166.8 480 30.8
Glyma.11G237600 Glycine max HOM05D004642 ORTHO05D005466 6.3e-39 166.8 374 39.6
SGA_v2.0_scaffold37G14818 Striga asiatica HOM05D004642 ORTHO05D005466 5.3e-38 163.7 715 38.2
MSTRG.9454 Avicennia marina HOM05D004642 ORTHO05D005466 1.5e-37 162.2 525 43.4
Os05g0180400 Oryza sativa ssp. japonica HOM05D004642 ORTHO05D005466 4.8e-31 140.6 665 34.0
SEGI_16798 Sequoiadendron giganteum HOM05D004642 ORTHO05D005466 1.1e-30 139.4 606 30.9
Cpa.g.sc1188.1 Carica papaya HOM05D004642 ORTHO05D005466 5.9e-29 133.7 306 49.0
CDE07G0399 Ceratophyllum demersum HOM05D004642 ORTHO05D005466 2.2e-28 131.7 633 25.1
Zm00001eb122200 Zea mays HOM05D004642 ORTHO05D005466 8.8e-25 119.8 586 29.9
MD09G1212900 Malus domestica HOM05D004642 ORTHO05D005466 1.1e-24 119.4 131 53.4
HPP92_019980 Vanilla planifolia HOM05D004642 ORTHO05D005466 1.1e-24 119.4 416 40.4
BolC1t04795H Brassica oleracea HOM05D004642 ORTHO05D005466 1.7e-23 115.5 277 33.2
MD09G1213400 Malus domestica HOM05D004642 ORTHO05D005466 4.1e-22 110.9 127 52.0
TAR624G0442 Trochodendron aralioides HOM05D004642 ORTHO05D005466 7.0e-22 110.2 115 57.4
Os01g0180300 Oryza sativa ssp. japonica HOM05D004642 ORTHO05D005466 1.2e-21 109.4 487 28.7
MD09G1213300 Malus domestica HOM05D004642 ORTHO05D005466 1.2e-18 99.4 107 56.1
A03p54580 Brassica napus HOM05D004642 ORTHO05D005466 1.0e-17 96.3 345 33.0
BraA03t14525Z Brassica rapa HOM05D004642 ORTHO05D005466 1.0e-17 96.3 345 33.0
BolC1t04793H Brassica oleracea HOM05D004642 ORTHO05D005466 6.7e-17 93.6 272 35.7
A01p38100 Brassica napus HOM05D015723 ORTHO05D003275 2.8e-15 88.2 374 27.5
Thhalv10023042m.g Eutrema salsugineum HOM05D004642 ORTHO05D005466 3.7e-15 87.8 239 28.9
AL776U10010 Arabidopsis lyrata HOM05D004642 ORTHO05D005466 7.0e-14 83.6 91 60.4
BraA01t03868Z Brassica rapa HOM05D004642 ORTHO05D005466 1.1e-11 76.3 269 29.4
COL.COLO4_36913 Corchorus olitorius HOM05D004642 ORTHO05D005466 1.2e-10 72.8 84 48.8
BolC1t04796H Brassica oleracea HOM05D004642 ORTHO05D005466 1.4e-09 69.3 277 30.0
CSS0005738 Camellia sinensis var. sinensis HOM05D004642 ORTHO05D005466 2.0e-08 65.5 53 60.4


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